Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31270_v3 Cicer arietinum L. HOM05D006175 ORTHO05D043346 1.9e-39 165.2 75 100.0
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 1.2e-09 66.2 74 52.7
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.2e-06 56.2 25 100.0
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 1.6e-06 55.8 25 96.0
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.7e-06 55.1 25 96.0
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 2.7e-06 55.1 27 88.9
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 96.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 92.0
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 92.0
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 92.0
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 96.0
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 96.0
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 3.6e-06 54.7 25 96.0
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 4.7e-06 54.3 25 96.0
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 4.7e-06 54.3 25 92.0
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 4.7e-06 54.3 25 92.0
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 4.7e-06 54.3 25 92.0
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 6.1e-06 53.9 24 95.8
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 88.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 88.0
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 6.1e-06 53.9 25 92.0
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 8.0e-06 53.5 25 92.0


User provided reference genes

Program Settings