Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31265_v3 Cicer arietinum L. HOM05D000410 ORTHO05D002963 1.5e-50 202.6 107 100.0
Medtr4g099060 Medicago truncatula HOM05D000410 ORTHO05D002963 4.3e-21 104.8 73 76.7
TPR.G19186 Trifolium pratense HOM05D000410 ORTHO05D002963 4.3e-21 104.8 73 78.1
Psat4g077520 Pisum sativum HOM05D000410 ORTHO05D002963 2.1e-20 102.4 73 76.7
Ca_22033_v3 Cicer arietinum L. HOM05D000410 ORTHO05D002963 9.9e-18 93.6 73 74.0
PGR031G3665 Punica granatum HOM05D000410 ORTHO05D002963 9.9e-18 93.6 73 72.6
CANSAT21G1942 Cannabis sativa HOM05D000410 ORTHO05D002963 1.3e-17 93.2 73 67.1
Manes.17G020100 Manihot esculenta HOM05D000410 ORTHO05D002963 1.3e-17 93.2 73 68.5
Dinv25169 Davidia involucrata HOM05D000410 ORTHO05D002963 2.9e-17 92.0 73 69.9
GSVIVG01013266001 Vitis vinifera HOM05D000410 ORTHO05D002963 2.9e-17 92.0 73 71.2
arahy.Tifrunner.gnm1.ann1.I1CICT Arachis hypogaea HOM05D000410 ORTHO05D002963 3.8e-17 91.7 73 69.9
Glyma.11G039700 Glycine max HOM05D000410 ORTHO05D002963 3.8e-17 91.7 73 67.1
Sabra01G0118500 Salix brachista HOM05D000410 ORTHO05D002963 3.8e-17 91.7 73 67.1
arahy.Tifrunner.gnm1.ann1.D5YLID Arachis hypogaea HOM05D000410 ORTHO05D002963 4.9e-17 91.3 73 69.9
CiPaw.11G085800 Carya illinoinensis HOM05D000410 ORTHO05D002963 4.9e-17 91.3 73 68.5
Ciclev10020548m.g Citrus clementina HOM05D000410 ORTHO05D002963 4.9e-17 91.3 73 68.5
Dinv28900 Davidia involucrata HOM05D000410 ORTHO05D002963 6.4e-17 90.9 73 69.9
FvH4_5g20850 Fragaria vesca HOM05D000410 ORTHO05D002963 6.4e-17 90.9 73 65.8
FAN08G2615 Fragaria x ananassa HOM05D000410 ORTHO05D002963 6.4e-17 90.9 73 64.4
FAN18G0369 Fragaria x ananassa HOM05D000410 ORTHO05D002963 6.4e-17 90.9 73 65.8
CiPaw.12G058700 Carya illinoinensis HOM05D000410 ORTHO05D002963 8.4e-17 90.5 73 68.5
VMungo0251G2888 Vigna mungo HOM05D000410 ORTHO05D002963 8.4e-17 90.5 73 68.5
Atru.chr9.1140 Acer truncatum HOM05D000410 ORTHO05D002963 1.1e-16 90.1 73 67.1
MELO3C003360.2 Cucumis melo HOM05D000410 ORTHO05D002963 1.4e-16 89.7 72 68.1
CsaV3_3G049650 Cucumis sativus L. HOM05D000410 ORTHO05D002963 1.4e-16 89.7 72 68.1
FAN04G2418 Fragaria x ananassa HOM05D000410 ORTHO05D002963 1.4e-16 89.7 73 64.4
MD06G1043600 Malus domestica HOM05D000410 ORTHO05D002963 1.4e-16 89.7 73 64.4
Phvul.003G227200 Phaseolus vulgaris HOM05D000410 ORTHO05D002963 1.4e-16 89.7 70 70.0
Thecc.03G236500 Theobroma cacao HOM05D000410 ORTHO05D002963 2.4e-16 89.0 73 67.1
TWI60G0489 Tripterygium wilfordii HOM05D000410 ORTHO05D002963 2.4e-16 89.0 73 65.8
Glyma.01G203300 Glycine max HOM05D000410 ORTHO05D002963 4.2e-16 88.2 72 66.7
Glyma.17G150900 Glycine max HOM05D000410 ORTHO05D002963 4.2e-16 88.2 72 68.1
vmacro00369 Vaccinium macrocarpon HOM05D000410 ORTHO05D002963 4.2e-16 88.2 73 67.1
ClCG09G012480 Citrullus lanatus HOM05D000410 ORTHO05D002963 5.5e-16 87.8 72 66.7
Manes.15G171500 Manihot esculenta HOM05D000410 ORTHO05D002963 5.5e-16 87.8 73 64.4
Nitab4.5_0001708g0030 Nicotiana tabacum HOM05D000410 ORTHO05D002963 7.1e-16 87.4 73 65.8
ClCG10G002020 Citrullus lanatus HOM05D000410 ORTHO05D002963 9.3e-16 87.0 71 67.6
MELO3C013883.2 Cucumis melo HOM05D000410 ORTHO05D002963 9.3e-16 87.0 72 66.7
DCAR_008308 Daucus carota HOM05D000410 ORTHO05D002963 9.3e-16 87.0 73 67.1
Potri.003G085800 Populus trichocarpa HOM05D000410 ORTHO05D002963 1.2e-15 86.7 73 63.0
Solyc08g077460.3 Solanum lycopersicum HOM05D000410 ORTHO05D002963 1.2e-15 86.7 73 64.4
CsaV3_3G002110 Cucumis sativus L. HOM05D000410 ORTHO05D002963 1.6e-15 86.3 72 66.7
Duzib068G0858 Durio zibethinus HOM05D000410 ORTHO05D002963 1.6e-15 86.3 71 66.2
Lalb_Chr16g0386211 Lupinus albus HOM05D000410 ORTHO05D002963 1.6e-15 86.3 73 65.8
Sed0015081 Sechium edule HOM05D000410 ORTHO05D002963 1.6e-15 86.3 72 63.9
FAN13G1868 Fragaria x ananassa HOM05D000410 ORTHO05D002963 2.1e-15 85.9 73 60.3
Eucgr.D02146 Eucalyptus grandis HOM05D000410 ORTHO05D002963 2.7e-15 85.5 73 64.4
arahy.Tifrunner.gnm1.ann1.6R4MXJ Arachis hypogaea HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 61.6
arahy.Tifrunner.gnm1.ann1.Y6VK3W Arachis hypogaea HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 61.6
EL10Ac5g12214 Beta vulgaris HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 64.4
Lalb_Chr09g0324001 Lupinus albus HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 63.0
MBI04_g44417_MAGBIO Magnolia biondii HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 65.8
THA.LOC104812822 Tarenaya hassleriana HOM05D000410 ORTHO05D002963 3.5e-15 85.1 91 53.8
vmacro14113 Vaccinium macrocarpon HOM05D000410 ORTHO05D002963 3.5e-15 85.1 73 65.8
Sabra03G0055700 Salix brachista HOM05D000410 ORTHO05D002963 4.6e-15 84.7 73 61.6
TWI81G0043 Tripterygium wilfordii HOM05D000410 ORTHO05D002963 4.6e-15 84.7 73 63.0
VMungo1215G2465 Vigna mungo HOM05D000410 ORTHO05D002963 4.6e-15 84.7 73 60.3
Lalb_Chr05g0220741 Lupinus albus HOM05D000410 ORTHO05D002963 6.0e-15 84.3 73 65.8
Sed0019352 Sechium edule HOM05D000410 ORTHO05D002963 6.0e-15 84.3 72 66.7
PGSC0003DMG400001841 Solanum tuberosum HOM05D000410 ORTHO05D002963 6.0e-15 84.3 73 63.0
THA.LOC104806686 Tarenaya hassleriana HOM05D000410 ORTHO05D002963 6.0e-15 84.3 73 63.0
Cc08_g01570 Coffea canephora HOM05D000410 ORTHO05D002963 7.9e-15 84.0 73 63.0
PGR042G2973 Punica granatum HOM05D000410 ORTHO05D002963 7.9e-15 84.0 73 64.4
Gorai.008G229800 Gossypium raimondii HOM05D000410 ORTHO05D002963 1.0e-14 83.6 73 63.0
MBI04_g45962_MAGBIO Magnolia biondii HOM05D000410 ORTHO05D002963 1.0e-14 83.6 73 64.4
Gohir.A12G211700 Gossypium hirsutum HOM05D000410 ORTHO05D002963 1.3e-14 83.2 73 63.0
Rhsim07G0120500 Rhododendron simsii HOM05D000410 ORTHO05D002963 1.3e-14 83.2 72 63.9
Ah.12g053780 Amaranthus hybridus HOM05D000410 ORTHO05D002963 1.8e-14 82.8 73 64.4
Gohir.D11G028100 Gossypium hirsutum HOM05D000410 ORTHO05D002963 1.8e-14 82.8 73 63.0
Gorai.007G030800 Gossypium raimondii HOM05D000410 ORTHO05D002963 1.8e-14 82.8 73 63.0
Nitab4.5_0008709g0030 Nicotiana tabacum HOM05D000410 ORTHO05D002963 1.8e-14 82.8 73 61.6
Actinidia03400 Actinidia chinensis HOM05D000410 ORTHO05D002963 2.3e-14 82.4 73 63.0
Actinidia31483 Actinidia chinensis HOM05D000410 ORTHO05D002963 2.3e-14 82.4 73 63.0
Psat2g174360 Pisum sativum HOM05D000410 ORTHO05D002963 2.3e-14 82.4 106 48.1
Nn1g00692 Nelumbo nucifera HOM05D000410 ORTHO05D002963 3.0e-14 82.0 73 61.6
Peaxi162Scf00102g00731 Petunia axillaris HOM05D000410 ORTHO05D002963 3.9e-14 81.6 70 61.4
Lj8A287T27 Lonicera japonica HOM05D000410 ORTHO05D002963 5.1e-14 81.3 73 61.6
Lalb_Chr09g0329641 Lupinus albus HOM05D000410 ORTHO05D002963 5.1e-14 81.3 73 63.0
TAR375G0421 Trochodendron aralioides HOM05D000410 ORTHO05D002963 5.1e-14 81.3 73 58.9
Actinidia10871 Actinidia chinensis HOM05D000410 ORTHO05D002963 6.7e-14 80.9 71 60.6
Medtr5g013690 Medicago truncatula HOM05D000410 ORTHO05D002963 6.7e-14 80.9 106 47.2
TAR636G3151 Trochodendron aralioides HOM05D000410 ORTHO05D002963 8.7e-14 80.5 73 60.3
TAR374G1463 Trochodendron aralioides HOM05D000410 ORTHO05D002963 1.1e-13 80.1 73 60.3
Actinidia25931 Actinidia chinensis HOM05D000410 ORTHO05D002963 1.5e-13 79.7 73 60.3
Hma1.2p1_0414F.1_g147550 Hydrangea macrophylla HOM05D000410 ORTHO05D002963 1.9e-13 79.3 73 61.6
Hund11297 Selenicereus undatus HOM05D000410 ORTHO05D002963 1.9e-13 79.3 73 58.9
THA.LOC104814702 Tarenaya hassleriana HOM05D000410 ORTHO05D002963 1.9e-13 79.3 71 62.0
Sed0020068 Sechium edule HOM05D000410 ORTHO05D002963 2.5e-13 79.0 72 59.7
PSO063G3541 Papaver somniferum HOM05D000410 ORTHO05D002963 3.3e-13 78.6 73 58.9
PSO782G0633 Papaver somniferum HOM05D000410 ORTHO05D002963 3.3e-13 78.6 73 58.9
Nitab4.5_0000506g0240 Nicotiana tabacum HOM05D000410 ORTHO05D002963 4.3e-13 78.2 72 61.1
Nitab4.5_0007226g0020 Nicotiana tabacum HOM05D000410 ORTHO05D002963 4.3e-13 78.2 73 60.3
Nitab4.5_0000185g0300 Nicotiana tabacum HOM05D000410 ORTHO05D002963 5.6e-13 77.8 73 57.5
Nitab4.5_0009819g0010 Nicotiana tabacum HOM05D000410 ORTHO05D002963 5.6e-13 77.8 72 61.1
ECA240G1721 Erigeron canadensis HOM05D000410 ORTHO05D002963 7.4e-13 77.4 92 52.2
Oeu017311.1 Olea europaea HOM05D000410 ORTHO05D002963 7.4e-13 77.4 73 58.9
TPR.G33935 Trifolium pratense HOM05D000410 ORTHO05D002963 7.4e-13 77.4 73 56.2
Carub.0008s0077 Capsella rubella HOM05D000410 ORTHO05D002963 9.6e-13 77.0 73 57.5
TAR629G2559 Trochodendron aralioides HOM05D000410 ORTHO05D002963 9.6e-13 77.0 73 58.9
Sopen06g021170 Solanum pennellii HOM05D000410 ORTHO05D002963 1.3e-12 76.6 72 58.3
Haze_08322 Corylus avellana HOM05D000410 ORTHO05D002963 1.6e-12 76.3 63 65.1
Cfa012361 Carpinus fangiana HOM05D000410 ORTHO05D002963 2.1e-12 75.9 62 66.1
Lsat_1_v5_gn_3_15981 Lactuca sativa HOM05D000410 ORTHO05D002963 2.1e-12 75.9 73 58.9
Solyc06g061020.3 Solanum lycopersicum HOM05D000410 ORTHO05D002963 2.8e-12 75.5 72 58.3
Gohir.A08G161400 Gossypium hirsutum HOM05D000410 ORTHO05D002963 4.8e-12 74.7 64 64.1
Aa31LG9G15200 Aethionema arabicum HOM05D000410 ORTHO05D002963 8.2e-12 73.9 72 61.1
Solyc08g007120.3 Solanum lycopersicum HOM05D000410 ORTHO05D002963 8.2e-12 73.9 73 56.2
Sopen08g026050 Solanum pennellii HOM05D000410 ORTHO05D002963 8.2e-12 73.9 73 58.9
PGSC0003DMG400026593 Solanum tuberosum HOM05D000410 ORTHO05D002963 1.1e-11 73.6 72 56.9
BcaC04g21656 Brassica carinata HOM05D000410 ORTHO05D002963 2.4e-11 72.4 73 54.8
BolC9t55787H Brassica oleracea HOM05D000410 ORTHO05D002963 2.4e-11 72.4 73 54.8
Lalb_Chr05g0214161 Lupinus albus HOM05D000410 ORTHO05D002963 3.1e-11 72.0 73 52.1
CARHR224400 Cardamine hirsuta HOM05D000410 ORTHO05D002963 4.0e-11 71.6 71 57.7
HanXRQChr06g0167201 Helianthus annuus HOM05D000410 ORTHO05D002963 4.0e-11 71.6 73 54.8
CDE12G0441 Ceratophyllum demersum HOM05D000410 ORTHO05D002963 5.3e-11 71.2 72 55.6
Peaxi162Scf00190g00029 Petunia axillaris HOM05D000410 ORTHO05D002963 6.9e-11 70.9 72 54.2
Duzib205G1992 Durio zibethinus HOM05D000410 ORTHO05D002963 9.0e-11 70.5 55 70.9
Carub.0007s2370 Capsella rubella HOM05D000410 ORTHO05D002963 1.2e-10 70.1 71 56.3
Thhalv10008231m.g Eutrema salsugineum HOM05D000410 ORTHO05D002963 1.5e-10 69.7 72 52.8
AUR62007204 Chenopodium quinoa HOM05D000410 ORTHO05D002963 2.0e-10 69.3 58 65.5
Phvul.002G002700 Phaseolus vulgaris HOM05D000410 ORTHO05D002963 2.0e-10 69.3 55 69.1
BcaNung04044 Brassica carinata HOM05D000410 ORTHO05D002963 4.5e-10 68.2 71 56.3
HanXRQChr17g0535651 Helianthus annuus HOM05D000410 ORTHO05D002963 4.5e-10 68.2 73 53.4
Sopen08g003070 Solanum pennellii HOM05D000410 ORTHO05D002963 4.5e-10 68.2 73 52.1
AL7G36910 Arabidopsis lyrata HOM05D000410 ORTHO05D002963 5.8e-10 67.8 71 56.3
AT1G32740 Arabidopsis thaliana HOM05D000410 ORTHO05D002963 5.8e-10 67.8 72 51.4
A06p45330 Brassica napus HOM05D000410 ORTHO05D002963 5.8e-10 67.8 72 52.8
CSS0025021 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D002963 7.6e-10 67.4 105 46.7
AUR62018798 Chenopodium quinoa HOM05D000410 ORTHO05D002963 7.6e-10 67.4 56 66.1
Oeu039358.1 Olea europaea HOM05D000410 ORTHO05D002963 7.6e-10 67.4 66 57.6
ATR0829G036 Amborella trichopoda HOM05D000410 ORTHO05D002963 1.0e-09 67.0 71 53.5
A02p30680 Brassica napus HOM05D000410 ORTHO05D002963 1.0e-09 67.0 60 58.3
BolC2t10857H Brassica oleracea HOM05D000410 ORTHO05D002963 1.0e-09 67.0 62 56.5
BraA02t08084Z Brassica rapa HOM05D000410 ORTHO05D002963 1.0e-09 67.0 60 58.3
COL.COLO4_06707 Corchorus olitorius HOM05D000410 ORTHO05D002963 1.0e-09 67.0 53 69.8
Peaxi162Scf00084g00027 Petunia axillaris HOM05D000410 ORTHO05D002963 1.0e-09 67.0 73 53.4
BolC7t45401H Brassica oleracea HOM05D000410 ORTHO05D002963 1.3e-09 66.6 71 56.3
RcHm_v2.0_Chr7g0207871 Rosa chinensis HOM05D000410 ORTHO05D002963 1.3e-09 66.6 57 61.4
Ah.07g199690 Amaranthus hybridus HOM05D000410 ORTHO05D002963 1.7e-09 66.2 70 51.4
AT4G17680 Arabidopsis thaliana HOM05D000410 ORTHO05D002963 2.9e-09 65.5 71 52.1
BcaC03g16922 Brassica carinata HOM05D000410 ORTHO05D002963 2.9e-09 65.5 62 54.8
BcaC06g31420 Brassica carinata HOM05D000410 ORTHO05D002963 2.9e-09 65.5 102 40.2
C02p48250 Brassica napus HOM05D000410 ORTHO05D002963 2.9e-09 65.5 62 54.8
BcaC06g33572 Brassica carinata HOM05D000410 ORTHO05D002963 3.8e-09 65.1 71 54.9
A03p50610 Brassica napus HOM05D000410 ORTHO05D002963 3.8e-09 65.1 71 54.9
C07p48930 Brassica napus HOM05D000410 ORTHO05D002963 3.8e-09 65.1 71 54.9
BraA03t14152Z Brassica rapa HOM05D000410 ORTHO05D002963 3.8e-09 65.1 71 54.9
Lj2g0008503 Lotus japonicus HOM05D000410 ORTHO05D002963 3.8e-09 65.1 72 52.8
Hund14452 Selenicereus undatus HOM05D000410 ORTHO05D002963 4.9e-09 64.7 61 60.7
AL1G47020 Arabidopsis lyrata HOM05D000410 ORTHO05D002963 1.1e-08 63.5 72 48.6
PGSC0003DMG400020510 Solanum tuberosum HOM05D000410 ORTHO05D002963 1.1e-08 63.5 73 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1312 Anthoceros agrestis HOM05D000410 ORTHO05D003410 1.4e-08 63.2 71 47.9
BcaC06g34290 Brassica carinata HOM05D000410 ORTHO05D002963 1.4e-08 63.2 72 50.0
Lj2P250T9 Lonicera japonica HOM05D000410 ORTHO05D002963 1.4e-08 63.2 57 63.2
BcaB07g30798 Brassica carinata HOM05D000410 ORTHO05D002963 2.5e-08 62.4 63 52.4
Sp7g16460 Schrenkiella parvula HOM05D000410 ORTHO05D002963 2.5e-08 62.4 70 55.7
CSS0004938 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D002963 3.2e-08 62.0 52 65.4
Os10g0565500 Oryza sativa ssp. japonica HOM05D000410 ORTHO05D002963 3.2e-08 62.0 72 50.0
Lsat_1_v5_gn_6_89121 Lactuca sativa HOM05D000410 ORTHO05D002963 4.2e-08 61.6 61 55.7
Gohir.D12G214200 Gossypium hirsutum HOM05D000410 ORTHO05D002963 5.5e-08 61.2 73 52.1
SEGI_24242 Sequoiadendron giganteum HOM05D000410 ORTHO05D003410 1.2e-07 60.1 70 45.7
ATR0582G237 Amborella trichopoda HOM05D000410 ORTHO05D003410 1.6e-07 59.7 70 44.3
Zm00001eb390750 Zea mays HOM05D000410 ORTHO05D002963 3.5e-07 58.5 72 47.2
CARHR032120 Cardamine hirsuta HOM05D000410 ORTHO05D002963 6.0e-07 57.8 72 47.2
Eucgr.E00327 Eucalyptus grandis HOM05D000410 ORTHO05D002963 6.0e-07 57.8 52 61.5
HPP92_014648 Vanilla planifolia HOM05D000410 ORTHO05D002963 6.0e-07 57.8 72 44.4
Sc01g0007850 Simmondsia chinensis HOM05D000410 ORTHO05D002963 7.9e-07 57.4 52 57.7
Carub.0001s3107 Capsella rubella HOM05D000410 ORTHO05D002963 1.0e-06 57.0 72 41.7
COL.COLO4_26532 Corchorus olitorius HOM05D000410 ORTHO05D007231 1.3e-06 56.6 70 48.6
SEGI_14364 Sequoiadendron giganteum HOM05D000410 ORTHO05D003410 1.8e-06 56.2 72 45.8
Dinv21882 Davidia involucrata HOM05D000410 ORTHO05D002963 3.0e-06 55.5 67 47.8
ECA233G3513 Erigeron canadensis HOM05D000410 ORTHO05D002963 3.0e-06 55.5 71 45.1
ECA246G3342 Erigeron canadensis HOM05D000410 ORTHO05D002963 5.1e-06 54.7 56 55.4
ATR0763G129 Amborella trichopoda HOM05D000410 ORTHO05D001514 8.7e-06 53.9 72 45.8


User provided reference genes

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