Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31153_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.1e-131 471.1 236 100.0
Ca_22944_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 5.2e-120 434.5 245 91.4
Ca_14462_v3 Cicer arietinum L. HOM05D001879 ORTHO05D000002 4.9e-110 401.4 245 86.1
Ca_13228_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 2.3e-99 365.9 300 67.3
Ca_31214_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.3e-46 190.7 104 93.3
Ca_09349_v3 Cicer arietinum L. HOM05D000083 ORTHO05D002968 1.5e-45 187.2 126 78.6
Ca_28494_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.5e-45 187.2 102 93.1
Ca_31139_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 4.2e-45 185.7 102 92.2
Ca_12997_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 7.2e-45 184.9 102 90.2
Ca_06875_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.4e-45 184.5 101 92.1
Ca_23022_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.4e-45 184.5 102 92.2
Ca_06828_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 1.6e-44 183.7 102 92.2
Ca_27233_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 2.1e-44 183.3 101 91.1
Ca_31155_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.0e-43 181.0 102 91.2
Ca_19065_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.2e-42 177.6 101 89.1
Ca_31111_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.6e-42 176.4 102 88.2
Ca_28268_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 4.4e-42 175.6 101 87.1
Ca_20160_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.3e-41 174.1 102 88.2
Ca_30421_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 4.9e-41 172.2 100 88.0
Ca_22646_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 3.1e-40 169.5 101 85.1
Psat6g016280 Pisum sativum HOM05D001879 ORTHO05D007648 3.1e-40 169.5 134 70.1
Ca_24213_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.6e-39 167.2 102 86.3
Medtr1g018350 Medicago truncatula HOM05D001879 ORTHO05D007648 1.9e-37 160.2 136 67.6
Ca_04842_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.8e-35 153.7 96 85.4
TPR.G3779 Trifolium pratense HOM05D001879 ORTHO05D007648 4.0e-35 152.5 125 67.2
Ca_03822_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.8e-34 147.9 102 76.5
Ca_14584_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 2.4e-32 143.3 91 78.0
Ca_13711_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.6e-31 140.6 87 81.6
Ca_28111_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.3e-30 136.7 68 97.1
Lj5g0015061 Lotus japonicus HOM05D001879 ORTHO05D007648 3.3e-29 132.9 138 58.7
Ca_18121_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.5e-29 131.3 87 77.0
Ca_26919_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.5e-29 131.3 87 77.0
Ca_28466_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.2e-27 125.6 64 92.2
Ca_19599_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.2e-26 124.4 68 91.2
VMungo0647G0280 Vigna mungo HOM05D001879 ORTHO05D007648 2.0e-26 123.6 131 56.5
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.6e-26 123.2 125 53.6
Cpa.g.sc142.15 Carica papaya HOM05D001879 ORTHO05D007648 2.6e-26 123.2 128 53.1
Glyma.17G235900 Glycine max HOM05D001879 ORTHO05D007648 2.6e-26 123.2 134 55.2
Phvul.001G026900 Phaseolus vulgaris HOM05D001879 ORTHO05D007648 2.6e-26 123.2 131 57.3
ClCG05G020550 Citrullus lanatus HOM05D001879 ORTHO05D007648 1.7e-25 120.6 138 54.3
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.9e-25 119.8 125 53.6
Ca_00232_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.9e-25 119.0 60 96.7
Glyma.14G088600 Glycine max HOM05D001879 ORTHO05D007648 1.1e-24 117.9 130 56.2
Prupe.1G423900 Prunus persica HOM05D001879 ORTHO05D007648 1.4e-24 117.5 133 53.4
Rhsim07G0220800 Rhododendron simsii HOM05D001879 ORTHO05D007648 1.4e-24 117.5 126 55.6
Sabra14G0010800 Salix brachista HOM05D001879 ORTHO05D007648 3.2e-24 116.3 130 51.5
Lsat_1_v5_gn_1_24340 Lactuca sativa HOM05D001879 ORTHO05D007648 5.4e-24 115.5 126 51.6
Ca_19482_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 7.0e-24 115.2 60 95.0
CANSAT25G1585 Cannabis sativa HOM05D001879 ORTHO05D007648 9.2e-24 114.8 126 55.6
Ca_26965_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.0e-23 113.6 68 82.4
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 2.7e-23 113.2 138 50.7
Ca_28383_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.6e-23 112.5 60 93.3
TAR633G2582 Trochodendron aralioides HOM05D001879 ORTHO05D007648 6.0e-23 112.1 125 52.0
Actinidia10192 Actinidia chinensis HOM05D001879 ORTHO05D007648 1.0e-22 111.3 130 50.8
Cfa013681 Carpinus fangiana HOM05D001879 ORTHO05D007648 1.0e-22 111.3 133 49.6
Manes.05G181200 Manihot esculenta HOM05D001879 ORTHO05D007648 1.3e-22 110.9 130 50.0
Nn5g30557 Nelumbo nucifera HOM05D001879 ORTHO05D007648 3.0e-22 109.8 125 49.6
Nitab4.5_0000164g0150 Nicotiana tabacum HOM05D001879 ORTHO05D007648 3.9e-22 109.4 135 46.7
Lalb_Chr24g0399421 Lupinus albus HOM05D001879 ORTHO05D007648 6.6e-22 108.6 125 52.8
FvH4_2g33220 Fragaria vesca HOM05D001879 ORTHO05D007648 8.6e-22 108.2 132 48.5
FAN24G0874 Fragaria x ananassa HOM05D001879 ORTHO05D007648 8.6e-22 108.2 132 48.5
SHI08393 Sapria himalayana HOM05D001879 ORTHO05D007648 8.6e-22 108.2 125 49.6
Ca_23451_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.1e-21 107.8 59 91.5
CsaV3_4G034990 Cucumis sativus L. HOM05D001879 ORTHO05D007648 1.5e-21 107.5 142 47.9
RcHm_v2.0_Chr6g0309441 Rosa chinensis HOM05D001879 ORTHO05D007648 3.3e-21 106.3 85 62.4
Ca_03456_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 4.3e-21 105.9 55 96.4
Ca_19756_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.6e-21 105.5 101 58.4
FAN20G0949 Fragaria x ananassa HOM05D001879 ORTHO05D007648 5.6e-21 105.5 132 47.7
Nitab4.5_0003803g0020 Nicotiana tabacum HOM05D001879 ORTHO05D007648 7.3e-21 105.1 131 46.6
MD08G1086000 Malus domestica HOM05D001879 ORTHO05D007648 1.2e-20 104.4 129 48.8
DCAR_008854 Daucus carota HOM05D001879 ORTHO05D007648 2.8e-20 103.2 125 48.0
Lj4A759T48 Lonicera japonica HOM05D001879 ORTHO05D007648 2.8e-20 103.2 147 44.2
Oeu022102.3 Olea europaea HOM05D001879 ORTHO05D007648 2.8e-20 103.2 135 49.6
Lalb_Chr22g0355581 Lupinus albus HOM05D001879 ORTHO05D007648 4.7e-20 102.4 123 53.7
AT1G27750 Arabidopsis thaliana HOM05D001879 ORTHO05D007648 6.2e-20 102.1 132 43.9
Ca_28442_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.1e-19 101.3 56 92.9
Thhalv10006638m.g Eutrema salsugineum HOM05D001879 ORTHO05D007648 1.4e-19 100.9 129 41.9
Ca_20726_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 4.0e-19 99.4 60 85.0
TWI56G1003 Tripterygium wilfordii HOM05D001879 ORTHO05D007648 4.0e-19 99.4 125 45.6
Potri.014G017000 Populus trichocarpa HOM05D001879 ORTHO05D007648 5.2e-19 99.0 125 48.0
HPP92_019611 Vanilla planifolia HOM05D001879 ORTHO05D007648 6.8e-19 98.6 119 47.9
FAN15G3244 Fragaria x ananassa HOM05D001879 ORTHO05D007648 8.9e-19 98.2 146 43.2
FAN27G0954 Fragaria x ananassa HOM05D001879 ORTHO05D007648 8.9e-19 98.2 139 44.6
C05p26440 Brassica napus HOM05D001879 ORTHO05D007648 1.2e-18 97.8 126 43.7
BolC5t31365H Brassica oleracea HOM05D001879 ORTHO05D007648 1.2e-18 97.8 126 43.7
Sed0027780 Sechium edule HOM05D001879 ORTHO05D007648 2.6e-18 96.7 126 48.4
QL12p037902 Quercus lobata HOM05D001879 ORTHO05D007648 5.8e-18 95.5 75 62.7
MSTRG.1026 Avicennia marina HOM05D001879 ORTHO05D007648 9.8e-18 94.7 124 45.2
CSS0015613 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007648 9.8e-18 94.7 124 49.2
Thecc.08G090000 Theobroma cacao HOM05D001879 ORTHO05D007648 9.8e-18 94.7 77 63.6
GSVIVG01009356001 Vitis vinifera HOM05D001879 ORTHO05D007648 9.8e-18 94.7 71 60.6
Dinv44962 Davidia involucrata HOM05D001879 ORTHO05D007648 1.3e-17 94.4 127 44.9
arahy.Tifrunner.gnm1.ann1.0QZG7W Arachis hypogaea HOM05D001879 ORTHO05D007648 1.7e-17 94.0 136 43.4
Gohir.D05G212700 Gossypium hirsutum HOM05D001879 ORTHO05D007648 1.7e-17 94.0 127 46.5
CDE06G0223 Ceratophyllum demersum HOM05D001879 ORTHO05D007648 2.2e-17 93.6 128 44.5
Sp1g23980 Schrenkiella parvula HOM05D001879 ORTHO05D007648 2.2e-17 93.6 131 40.5
Ca_30951_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 3.7e-17 92.8 101 58.4
HanXRQChr08g0220641 Helianthus annuus HOM05D001879 ORTHO05D007648 3.7e-17 92.8 102 48.0
Os01g0765200 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007648 3.7e-17 92.8 78 55.1
SEGI_08589 Sequoiadendron giganteum HOM05D001879 ORTHO05D007648 3.7e-17 92.8 125 42.4
ATR0208G021 Amborella trichopoda HOM05D001879 ORTHO05D007648 8.3e-17 91.7 118 47.5
ECA247G3074 Erigeron canadensis HOM05D001879 ORTHO05D007648 1.1e-16 91.3 102 51.0
A09p38350 Brassica napus HOM05D001879 ORTHO05D007648 5.4e-16 89.0 131 39.7
Cc10_g05690 Coffea canephora HOM05D001879 ORTHO05D007648 5.4e-16 89.0 142 40.8
AL1G41280 Arabidopsis lyrata HOM05D001879 ORTHO05D007648 7.1e-16 88.6 131 38.9
BraA09t39344Z Brassica rapa HOM05D001879 ORTHO05D007648 7.1e-16 88.6 131 39.7
arahy.Tifrunner.gnm1.ann1.6NC3R4 Arachis hypogaea HOM05D001879 ORTHO05D007648 1.6e-15 87.4 140 40.7
BcaC05g26775 Brassica carinata HOM05D001879 ORTHO05D007648 2.1e-15 87.0 129 38.8
Sopen04g031540 Solanum pennellii HOM05D001879 ORTHO05D007648 2.7e-15 86.7 71 57.7
Gohir.A05G209500 Gossypium hirsutum HOM05D001879 ORTHO05D007648 4.6e-15 85.9 73 58.9
Gorai.009G219200 Gossypium raimondii HOM05D001879 ORTHO05D007648 4.6e-15 85.9 73 58.9
SalBow7G0276 Salvia bowleyana HOM05D001879 ORTHO05D007648 3.9e-14 82.8 71 52.1
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 5.1e-14 82.4 72 56.9
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.9e-13 80.5 135 40.0
AUR62038814 Chenopodium quinoa HOM05D001879 ORTHO05D007648 5.6e-13 79.0 72 54.2
Ca_04972_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.6e-13 79.0 101 53.5
Ca_30972_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.6e-13 79.0 101 53.5
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 7.3e-13 78.6 136 38.2
Aa31sc113G20 Aethionema arabicum HOM05D001879 ORTHO05D007648 1.2e-12 77.8 112 40.2
Sc15g0005720 Simmondsia chinensis HOM05D001879 ORTHO05D007648 4.7e-12 75.9 128 37.5
EL10Ac1g02391 Beta vulgaris HOM05D001879 ORTHO05D007648 1.4e-11 74.3 132 38.6
Ca_30992_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.3e-11 73.6 43 90.7
SGA_v2.0_scaffold238G43965 Striga asiatica HOM05D001879 ORTHO05D007648 2.3e-11 73.6 72 48.6
Ca_24075_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.0e-11 72.8 102 49.0
Pp3c24_10810 Physcomitrium patens HOM05D001879 ORTHO05D007648 6.8e-11 72.0 82 43.9
CiPaw.07G175900 Carya illinoinensis HOM05D001879 ORTHO05D007648 3.4e-10 69.7 44 72.7
Ca_11927_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 5.8e-10 68.9 40 90.0
Ca_27615_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 9.9e-10 68.2 43 86.0
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 1.7e-09 67.4 59 59.3
Carub.0001s2626 Capsella rubella HOM05D001879 ORTHO05D007648 1.1e-08 64.7 127 31.5
Zm00001eb152180 Zea mays HOM05D001879 ORTHO05D007648 1.4e-08 64.3 138 35.5
Haze_22323 Corylus avellana HOM05D001879 ORTHO05D007648 5.4e-08 62.4 108 38.9
Ca_04437_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.2e-07 61.2 40 85.0
Ca_30412_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.2e-07 61.2 40 85.0
Ca_12573_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 3.5e-07 59.7 39 79.5
Ca_02659_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 8.6e-06 55.1 40 77.5


User provided reference genes

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