Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30996_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 8.2e-171 603.6 297 100.0
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 3.1e-170 601.7 295 100.0
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 5.3e-154 547.7 295 91.2
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.7e-152 542.7 295 91.2
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 2.2e-152 542.3 295 90.8
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.0e-148 529.3 295 86.1
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 1.5e-143 513.1 295 84.7
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 8.0e-142 507.3 296 83.4
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 1.8e-141 506.1 296 83.1
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.3e-136 490.0 296 81.4
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.0e-133 480.3 296 79.7
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 7.8e-129 464.2 295 76.6
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.6e-126 456.4 317 71.9
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 6.8e-117 424.5 311 66.6
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.1e-113 412.9 311 65.0
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 2.3e-112 409.5 311 65.0
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 2.0e-108 396.4 311 62.7
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 3.4e-108 395.6 323 61.6
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 5.8e-108 394.8 311 63.3
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 7.6e-108 394.4 311 62.7
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 9.9e-108 394.0 311 62.4
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 3.8e-107 392.1 315 62.2
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 4.9e-107 391.7 311 62.1
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 6.4e-107 391.3 311 63.3
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 1.1e-106 390.6 309 62.1
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.9e-106 389.8 312 61.9
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 9.2e-106 387.5 311 61.7
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 1.0e-104 384.0 311 62.4
TAR623G0911 Trochodendron aralioides HOM05D003492 ORTHO05D005115 1.0e-104 384.0 311 61.1
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 2.3e-104 382.9 311 61.7
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.9e-104 382.1 311 62.1
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 8.7e-104 380.9 311 62.1
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 4.3e-103 378.6 311 60.8
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 4.3e-103 378.6 361 54.8
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 4.3e-103 378.6 311 59.2
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 9.6e-103 377.5 311 60.5
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla HOM05D003492 ORTHO05D005115 4.7e-102 375.2 340 57.6
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.1e-101 374.0 311 59.8
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 2.4e-101 372.9 311 59.8
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 3.1e-101 372.5 308 60.4
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 4.0e-101 372.1 311 60.8
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 9.0e-101 370.9 309 60.2
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 2.6e-100 369.4 309 59.9
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 5.8e-100 368.2 317 59.0
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 4.9e-99 365.2 310 59.4
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.4e-98 363.6 318 58.8
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.9e-98 363.2 318 58.8
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.2e-97 360.5 310 59.7
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.7e-96 356.7 318 58.2
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 6.6e-96 354.8 337 55.5
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.5e-95 353.6 320 57.8
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.6e-94 350.1 312 58.3
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 2.1e-94 349.7 312 56.7
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.8e-94 349.4 320 57.5
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.8e-94 349.4 375 49.9
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 1.8e-93 346.7 310 56.8
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 6.9e-93 344.7 314 55.4
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 1.2e-92 344.0 324 55.9
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 1.2e-92 344.0 364 50.8
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 4.5e-92 342.0 309 57.3
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 4.5e-92 342.0 309 57.3
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 5.8e-92 341.7 310 55.8
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 5.8e-92 341.7 307 54.1
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 5.8e-92 341.7 312 57.1
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 9.9e-92 340.9 327 56.0
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 2.2e-91 339.7 309 56.0
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.9e-91 339.3 309 55.0
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 8.4e-91 337.8 310 57.4
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 4.2e-90 335.5 311 55.9
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 7.1e-90 334.7 309 57.9
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 7.1e-90 334.7 313 56.5
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.1e-89 333.2 295 57.6
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 4.6e-89 332.0 308 56.2
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.3e-88 329.7 300 54.7
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 5.1e-88 328.6 309 54.7
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 1.9e-87 326.6 319 54.2
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 1.9e-87 326.6 309 54.4
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 5.6e-87 325.1 309 56.3
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 7.4e-87 324.7 311 53.4
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 9.6e-87 324.3 312 54.5
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 2.8e-86 322.8 312 54.8
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 1.2e-84 317.4 319 53.3
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 3.4e-84 315.8 314 52.2
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 3.8e-83 312.4 309 54.0
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 1.3e-80 303.9 302 53.0
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 5.1e-80 302.0 312 53.2
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 3.8e-75 285.8 319 50.5
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 5.5e-74 282.0 292 52.1
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 2.9e-67 259.6 309 44.3
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 4.5e-60 235.7 308 47.4
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 1.0e-59 234.6 213 52.1
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 8.8e-56 221.5 234 47.4
Psat2g065680 Pisum sativum HOM05D003492 ORTHO05D005115 4.5e-52 209.1 122 82.0
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 5.5e-50 202.2 209 56.0
Hund28567 Selenicereus undatus HOM05D003492 ORTHO05D005115 9.4e-50 201.4 213 47.9
HPP92_012036 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.3e-43 181.0 230 43.5
Duzib114G0096 Durio zibethinus HOM05D003492 ORTHO05D005115 1.1e-42 177.9 126 66.7
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 3.0e-40 169.9 209 44.5
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 5.9e-36 155.6 295 35.3
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 5.9e-36 155.6 332 33.1
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 6.1e-33 145.6 329 31.3
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.3e-32 143.7 298 32.2
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 1.1e-29 134.8 254 33.9
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 3.1e-29 133.3 329 30.4
SEGI_03313 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 1.6e-28 131.0 206 38.3
Lj8A65T41 Lonicera japonica HOM05D003492 ORTHO05D005115 2.3e-24 117.1 78 69.2
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 6.3e-22 109.0 78 64.1
DCAR_011824 Daucus carota HOM05D003492 ORTHO05D005115 2.7e-20 103.6 76 64.5
SHI03336 Sapria himalayana HOM05D003492 ORTHO05D005115 7.8e-20 102.1 124 43.5
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 1.0e-19 101.7 81 61.7
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.7e-19 100.9 89 55.1
Lj8A65T40 Lonicera japonica HOM05D003492 ORTHO05D005115 3.9e-19 99.8 74 63.5
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 3.3e-18 96.7 126 44.4
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 1.4e-13 81.3 84 44.0
SHI03338 Sapria himalayana HOM05D003492 ORTHO05D005115 5.0e-11 72.8 75 45.3


User provided reference genes

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