Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30710_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 4.1e-139 498.0 248 100.0
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 4.5e-114 414.8 293 75.4
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 3.2e-112 408.7 292 74.0
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 2.6e-109 399.1 292 73.6
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 6.1e-103 377.9 295 70.5
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 8.0e-103 377.5 294 70.1
Ca_27225_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 7.5e-101 370.9 220 86.4
Phvul.002G328600 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 1.7e-100 369.8 292 67.1
Phvul.002G328704 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 1.7e-100 369.8 292 67.1
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 3.7e-100 368.6 291 66.7
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 7.0e-99 364.4 292 66.8
VMungo0251G2737 Vigna mungo HOM05D002653 ORTHO05D002623 9.1e-99 364.0 292 66.4
arahy.Tifrunner.gnm1.ann1.21MRAZ Arachis hypogaea HOM05D002653 ORTHO05D002623 7.7e-98 360.9 292 66.8
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 1.1e-96 357.1 292 66.1
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 2.5e-80 302.8 292 57.5
QL04p064964 Quercus lobata HOM05D002653 ORTHO05D002623 5.8e-77 291.6 292 56.5
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 1.2e-74 283.9 291 53.6
CiPaw.06G000600 Carya illinoinensis HOM05D002653 ORTHO05D002623 1.6e-74 283.5 292 55.1
Ca_01486_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 7.8e-74 281.2 205 76.1
CSS0041142 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.1e-72 277.3 292 52.4
CSS0047039 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.1e-72 277.3 292 52.4
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 1.1e-72 277.3 293 52.6
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 1.9e-72 276.6 291 52.9
Ciclev10010886m.g Citrus clementina HOM05D002653 ORTHO05D002623 3.3e-72 275.8 292 51.7
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 2.1e-71 273.1 292 52.4
Atru.chr8.1038_Atru.chr8.1039 Acer truncatum HOM05D002653 ORTHO05D002623 1.1e-70 270.8 292 53.1
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 2.3e-70 269.6 292 53.4
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 2.0e-69 266.5 292 53.4
GSVIVG01019366001 Vitis vinifera HOM05D002653 ORTHO05D002623 3.4e-69 265.8 292 51.4
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 7.5e-69 264.6 292 53.1
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 7.5e-69 264.6 292 53.1
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 7.5e-69 264.6 292 53.1
Cpa.g.sc119.2 Carica papaya HOM05D002653 ORTHO05D002623 1.9e-67 260.0 292 50.0
arahy.Tifrunner.gnm1.ann1.LJ799F Arachis hypogaea HOM05D002653 ORTHO05D002623 2.7e-66 256.1 308 50.6
Haze_24502 Corylus avellana HOM05D002653 ORTHO05D002623 3.5e-66 255.8 259 54.1
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 3.5e-66 255.8 291 51.2
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 4.6e-66 255.4 292 51.7
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 7.8e-66 254.6 291 50.9
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 3.9e-65 252.3 292 50.3
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 2.5e-64 249.6 292 48.3
vmacro03486 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 7.3e-64 248.1 292 49.7
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 9.5e-64 247.7 292 48.3
Lj4C825G3 Lonicera japonica HOM05D002653 ORTHO05D002623 1.2e-63 247.3 292 48.3
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 2.1e-63 246.5 292 46.9
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 8.9e-62 241.1 292 48.3
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 9.9e-61 237.7 276 49.3
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 9.9e-61 237.7 292 49.3
arahy.Tifrunner.gnm1.ann1.FGIJ89 Arachis hypogaea HOM05D002653 ORTHO05D002623 1.3e-60 237.3 226 58.0
COL.COLO4_33575 Corchorus olitorius HOM05D002653 ORTHO05D002623 1.3e-60 237.3 292 47.6
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 2.9e-60 236.1 294 47.6
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 4.9e-60 235.3 292 47.3
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 6.4e-60 235.0 291 47.4
Sp2g22690 Schrenkiella parvula HOM05D002653 ORTHO05D002623 6.4e-60 235.0 291 48.1
Sed0003631 Sechium edule HOM05D002653 ORTHO05D002623 6.4e-60 235.0 293 49.5
CARHR188760 Cardamine hirsuta HOM05D002653 ORTHO05D002623 1.4e-59 233.8 291 48.1
Nitab4.5_0006025g0010 Nicotiana tabacum HOM05D002653 ORTHO05D002623 1.4e-59 233.8 279 49.5
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 4.2e-59 232.3 291 48.1
Peaxi162Scf00126g00524 Petunia axillaris HOM05D002653 ORTHO05D002623 7.1e-59 231.5 292 47.3
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 1.2e-58 230.7 291 47.1
Cc11_g00280 Coffea canephora HOM05D002653 ORTHO05D002623 1.6e-58 230.3 292 43.2
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 2.1e-58 229.9 293 46.8
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 2.7e-58 229.6 291 47.8
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 2.7e-58 229.6 291 46.4
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 2.7e-58 229.6 291 46.4
MELO3C010025.2 Cucumis melo HOM05D002653 ORTHO05D002623 2.7e-58 229.6 296 50.0
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 4.6e-58 228.8 291 46.4
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 4.6e-58 228.8 297 51.2
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 7.8e-58 228.0 296 49.3
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 1.0e-57 227.6 276 48.2
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 1.0e-57 227.6 292 45.9
FAN05G4926 Fragaria x ananassa HOM05D002653 ORTHO05D002623 2.3e-57 226.5 261 51.0
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 3.9e-57 225.7 294 46.6
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 5.1e-57 225.3 292 46.2
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 5.1e-57 225.3 293 45.1
Gohir.D04G020351 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.5e-56 223.8 276 47.8
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 5.6e-56 221.9 291 45.0
TAR624G1146 Trochodendron aralioides HOM05D002653 ORTHO05D002623 2.1e-55 219.9 289 47.8
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 3.6e-55 219.2 299 47.2
AUR62007656 Chenopodium quinoa HOM05D002653 ORTHO05D002623 6.2e-55 218.4 292 44.9
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 6.2e-55 218.4 290 45.2
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 8.1e-55 218.0 291 44.7
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 8.1e-55 218.0 292 44.9
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 5.3e-54 215.3 310 44.5
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 2.0e-53 213.4 278 47.5
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 1.1e-51 207.6 293 45.1
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 7.1e-51 204.9 293 42.0
MD09G1170300 Malus domestica HOM05D002653 ORTHO05D002623 7.1e-51 204.9 245 48.6
Migut.L00525 Erythranthe guttata HOM05D002653 ORTHO05D002623 1.0e-49 201.1 293 41.6
Migut.L00786 Erythranthe guttata HOM05D002653 ORTHO05D002623 2.3e-49 199.9 288 42.4
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 3.3e-48 196.1 293 43.3
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 5.6e-48 195.3 293 43.3
Zm00001eb260890 Zea mays HOM05D002653 ORTHO05D002623 3.1e-46 189.5 291 41.2
Os08g0116566 Oryza sativa ssp. japonica HOM05D002653 ORTHO05D002623 4.0e-46 189.1 289 39.4
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 1.5e-45 187.2 294 40.1
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 2.9e-44 183.0 292 41.4
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 2.1e-42 176.8 296 39.2
HPP92_001355 Vanilla planifolia HOM05D002653 ORTHO05D002623 2.4e-38 163.3 293 37.9
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 1.2e-34 151.0 278 37.1
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 8.2e-31 138.3 291 36.8
Hma1.2p1_2738F.1_g327700 Hydrangea macrophylla HOM05D002653 ORTHO05D002623 3.0e-25 119.8 144 49.3
Mapoly0009s0011 Marchantia polymorpha HOM05D002653 ORTHO05D002623 7.7e-21 105.1 267 31.8
Aqoxy4G01176 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 7.9e-18 95.1 70 72.9
SMO353G0260 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 2.8e-15 86.7 192 32.3
arahy.Tifrunner.gnm1.ann1.U4FA7I Arachis hypogaea HOM05D002653 ORTHO05D002623 4.1e-14 82.8 50 80.0
CBR_g47051 Chara braunii HOM05D002653 ORTHO05D002623 2.0e-13 80.5 221 27.1
Pp3c15_25690 Physcomitrium patens HOM05D002653 ORTHO05D002623 2.2e-12 77.0 72 54.2
HPP92_000045 Vanilla planifolia HOM05D002653 ORTHO05D002623 1.4e-11 74.3 136 34.6
Gorai.012G024500 Gossypium raimondii HOM05D002653 ORTHO05D002623 6.7e-09 65.5 52 63.5
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 2.0e-08 63.9 35 97.1
Ca_09437_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 7.4e-08 62.0 34 97.1
HPP92_001361 Vanilla planifolia HOM05D002653 ORTHO05D002623 7.0e-06 55.5 239 27.2


User provided reference genes

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