Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30189_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 4.7e-149 531.2 272 100.0
Ca_13614_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 3.4e-139 498.4 257 99.6
TPR.G34118 Trifolium pratense HOM05D005117 ORTHO05D005956 5.6e-126 454.5 257 88.7
Medtr4g030200 Medicago truncatula HOM05D005117 ORTHO05D005956 1.6e-125 453.0 257 88.3
Psat7g227480 Pisum sativum HOM05D005117 ORTHO05D005956 2.1e-125 452.6 257 89.5
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 1.5e-123 446.4 257 88.3
Glyma.12G241600 Glycine max HOM05D005117 ORTHO05D005956 1.5e-123 446.4 257 88.3
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 4.5e-123 444.9 257 86.0
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 1.7e-122 443.0 257 86.4
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 1.4e-121 439.9 257 85.6
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 1.4e-121 439.9 257 85.6
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 1.4e-121 439.9 257 84.4
Lj3g0005068 Lotus japonicus HOM05D005117 ORTHO05D005956 2.7e-120 435.6 257 84.0
Haze_13982 Corylus avellana HOM05D005117 ORTHO05D005956 2.8e-117 425.6 259 82.6
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 3.1e-116 422.2 257 82.5
Eucgr.A01322 Eucalyptus grandis HOM05D005117 ORTHO05D005956 1.2e-115 420.2 257 80.2
QL09p001419 Quercus lobata HOM05D005117 ORTHO05D005956 1.7e-114 416.4 256 80.9
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 1.1e-113 413.7 257 79.8
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 1.1e-113 413.7 257 79.8
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 1.1e-113 413.7 259 79.9
Prupe.8G004200 Prunus persica HOM05D005117 ORTHO05D005956 1.4e-113 413.3 257 80.5
ClCG11G008340 Citrullus lanatus HOM05D005117 ORTHO05D005956 1.9e-113 412.9 257 79.8
MD10G1002600 Malus domestica HOM05D005117 ORTHO05D005956 1.9e-113 412.9 257 81.3
CSS0010464 Camellia sinensis var. sinensis HOM05D005117 ORTHO05D005956 9.3e-113 410.6 257 78.2
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 3.5e-112 408.7 258 78.7
Nitab4.5_0001489g0010 Nicotiana tabacum HOM05D005117 ORTHO05D005956 3.0e-111 405.6 257 79.0
Nitab4.5_0000009g0430 Nicotiana tabacum HOM05D005117 ORTHO05D005956 3.9e-111 405.2 257 78.6
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 8.7e-111 404.1 257 77.0
Cpa.g.sc142.12 Carica papaya HOM05D005117 ORTHO05D005956 2.5e-110 402.5 259 77.2
RcHm_v2.0_Chr6g0250391 Rosa chinensis HOM05D005117 ORTHO05D005956 4.3e-110 401.7 257 77.4
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 4.3e-110 401.7 259 77.6
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 9.7e-110 400.6 254 78.3
Hma1.2p1_0016F.1_g010930 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 9.7e-110 400.6 254 78.3
Rhsim12G0002100 Rhododendron simsii HOM05D005117 ORTHO05D005956 9.7e-110 400.6 257 76.3
COL.COLO4_25130 Corchorus olitorius HOM05D005117 ORTHO05D005956 1.6e-109 399.8 257 77.4
THA.LOC104810302 Tarenaya hassleriana HOM05D005117 ORTHO05D005956 2.8e-109 399.1 257 76.3
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 4.8e-109 398.3 257 79.4
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 8.2e-109 397.5 257 78.2
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 1.4e-108 396.7 257 76.3
Sed0010084 Sechium edule HOM05D005117 ORTHO05D005956 1.4e-108 396.7 257 77.0
Gohir.D08G250900 Gossypium hirsutum HOM05D005117 ORTHO05D005956 2.4e-108 396.0 257 76.3
Gorai.004G267600 Gossypium raimondii HOM05D005117 ORTHO05D005956 2.4e-108 396.0 257 76.3
Potri.013G096600 Populus trichocarpa HOM05D005117 ORTHO05D005956 4.1e-108 395.2 257 75.5
Sabra13G0082800 Salix brachista HOM05D005117 ORTHO05D005956 4.1e-108 395.2 257 75.1
Sopen11g020570 Solanum pennellii HOM05D005117 ORTHO05D005956 4.1e-108 395.2 257 76.7
FAN20G0498 Fragaria x ananassa HOM05D005117 ORTHO05D005956 1.2e-107 393.7 257 76.3
Gohir.A08G230500 Gossypium hirsutum HOM05D005117 ORTHO05D005956 3.4e-107 392.1 257 75.9
PGSC0003DMG401019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 5.9e-107 391.3 257 76.3
Solyc11g045120.3 Solanum lycopersicum HOM05D005117 ORTHO05D005956 1.3e-106 390.2 257 75.9
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 1.7e-106 389.8 257 75.5
FvH4_2g00430 Fragaria vesca HOM05D005117 ORTHO05D005956 1.7e-106 389.8 257 75.9
CANSAT21G1171 Cannabis sativa HOM05D005117 ORTHO05D005956 2.2e-106 389.4 257 75.1
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 5.0e-106 388.3 258 76.0
RcHm_v2.0_Chr6g0250211 Rosa chinensis HOM05D005117 ORTHO05D005956 6.5e-106 387.9 257 75.5
vmacro00948 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 8.5e-106 387.5 259 74.1
CAN.G75.10 Capsicum annuum HOM05D005117 ORTHO05D005956 1.1e-105 387.1 257 74.7
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 1.4e-105 386.7 257 73.2
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 1.4e-105 386.7 257 75.1
RcHm_v2.0_Chr6g0249701 Rosa chinensis HOM05D005117 ORTHO05D005956 1.4e-105 386.7 257 75.5
Ah.05g170440 Amaranthus hybridus HOM05D005117 ORTHO05D005956 9.4e-105 384.0 257 72.8
Aa31LG4G9190 Aethionema arabicum HOM05D005117 ORTHO05D005956 2.1e-104 382.9 257 72.0
Atru.chr13.2570 Acer truncatum HOM05D005117 ORTHO05D005956 2.7e-104 382.5 257 74.3
HanXRQChr12g0369271 Helianthus annuus HOM05D005117 ORTHO05D005956 3.6e-104 382.1 256 73.0
EL10Ac1g01281 Beta vulgaris HOM05D005117 ORTHO05D005956 4.6e-104 381.7 257 72.8
Thhalv10018306m.g Eutrema salsugineum HOM05D005117 ORTHO05D005956 1.4e-103 380.2 257 70.4
Migut.C01395 Erythranthe guttata HOM05D005117 ORTHO05D005956 1.8e-103 379.8 257 73.9
PSO017G2614 Papaver somniferum HOM05D005117 ORTHO05D005956 8.8e-103 377.5 260 72.3
Hund26940 Selenicereus undatus HOM05D005117 ORTHO05D005956 1.1e-102 377.1 249 73.5
Sp5g26520 Schrenkiella parvula HOM05D005117 ORTHO05D005956 1.5e-102 376.7 257 70.4
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 1.5e-102 376.7 257 72.8
Aqoxy5G01861 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 2.0e-102 376.3 258 72.5
PSO170G3068 Papaver somniferum HOM05D005117 ORTHO05D005956 2.0e-102 376.3 260 71.9
MBI06_g32153_MAGBIO Magnolia biondii HOM05D005117 ORTHO05D005956 5.7e-102 374.8 259 73.4
Peaxi162Scf00078g01021 Petunia axillaris HOM05D005117 ORTHO05D005956 1.7e-101 373.2 242 77.7
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 1.7e-101 373.2 257 72.0
ECA247G0677 Erigeron canadensis HOM05D005117 ORTHO05D005956 1.4e-100 370.2 256 71.1
BcaB03g14892 Brassica carinata HOM05D005117 ORTHO05D005956 2.4e-100 369.4 258 69.0
Carub.0002s1821 Capsella rubella HOM05D005117 ORTHO05D005956 3.1e-100 369.0 258 69.8
A07p37640 Brassica napus HOM05D005117 ORTHO05D005956 1.2e-99 367.1 258 69.0
BraA07t31328Z Brassica rapa HOM05D005117 ORTHO05D005956 1.2e-99 367.1 258 69.0
C06p45410 Brassica napus HOM05D005117 ORTHO05D005956 1.5e-99 366.7 258 68.6
BcaC08g46567 Brassica carinata HOM05D005117 ORTHO05D005956 2.6e-99 365.9 258 68.6
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 3.4e-99 365.5 240 76.7
BolC6t39599H Brassica oleracea HOM05D005117 ORTHO05D005956 5.9e-99 364.8 258 68.6
CARHR064630 Cardamine hirsuta HOM05D005117 ORTHO05D005956 5.9e-99 364.8 258 69.0
AL2G31010 Arabidopsis lyrata HOM05D005117 ORTHO05D005956 7.7e-99 364.4 258 68.6
AT1G71350 Arabidopsis thaliana HOM05D005117 ORTHO05D005956 2.9e-98 362.5 258 68.6
Atru.chr13.2543 Acer truncatum HOM05D005117 ORTHO05D005956 1.1e-97 360.5 244 73.8
Os02g0557600 Oryza sativa ssp. japonica HOM05D005117 ORTHO05D005956 1.9e-97 359.8 258 71.3
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 3.0e-95 352.4 258 68.2
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 3.9e-95 352.1 258 67.8
PGSC0003DMG402019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 6.7e-95 351.3 231 76.2
ATR1089G036 Amborella trichopoda HOM05D005117 ORTHO05D005956 1.5e-94 350.1 248 71.0
CDE05G1166 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 9.7e-94 347.4 258 67.4
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 2.4e-92 342.8 258 67.1
unitig_37.g13073 Utricularia gibba HOM05D005117 ORTHO05D005956 9.1e-92 340.9 257 68.1
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 7.2e-89 331.3 255 67.1
SEGI_03298 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 7.2e-89 331.3 250 65.6
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 1.6e-88 330.1 216 76.9
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 2.2e-85 319.7 261 61.3
vmacro00947 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.1e-84 317.4 224 71.9
AagrBONN_evm.TU.Sc2ySwM_340.48 Anthoceros agrestis HOM05D005117 ORTHO05D005956 7.7e-83 311.2 259 59.8
Aqoxy5G01859 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 4.0e-79 298.9 261 59.8
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 1.9e-73 280.0 267 54.3
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 6.8e-71 271.6 222 61.7
vmacro00946 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 2.0e-70 270.0 256 58.2
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 3.5e-59 232.6 160 74.4
Zm00001eb084470 Zea mays HOM05D005117 ORTHO05D005956 5.6e-49 198.7 158 63.3
FAN24G1044 Fragaria x ananassa HOM05D005117 ORTHO05D005956 3.4e-46 189.5 111 82.0
RcHm_v2.0_Chr6g0249891 Rosa chinensis HOM05D005117 ORTHO05D005956 3.2e-44 183.0 111 80.2
AUR62038541 Chenopodium quinoa HOM05D005117 ORTHO05D005956 1.6e-43 180.6 110 79.1
RcHm_v2.0_Chr6g0250171 Rosa chinensis HOM05D005117 ORTHO05D005956 1.7e-42 177.2 111 77.5
Cre06.g303650 Chlamydomonas reinhardtii HOM05D005117 ORTHO05D005956 5.1e-42 175.6 279 36.9
MCO13G430 Micromonas commoda HOM05D005117 ORTHO05D005956 7.1e-36 155.2 256 35.2
RcHm_v2.0_Chr6g0250321 Rosa chinensis HOM05D005117 ORTHO05D005956 1.5e-33 147.5 99 73.7
Rhsim03G0007800 Rhododendron simsii HOM05D000003 ORTHO05D005956 6.0e-27 125.6 134 52.2
RcHm_v2.0_Chr6g0249981 Rosa chinensis HOM05D005117 ORTHO05D005956 1.6e-24 117.5 69 84.1
Cfa026610 Carpinus fangiana HOM05D005117 ORTHO05D005956 2.1e-24 117.1 276 30.1
Rhsim09G0011400 Rhododendron simsii HOM05D005117 ORTHO05D005956 2.7e-11 73.6 50 72.0
Cc10_g13530 Coffea canephora HOM05D005117 ORTHO05D005956 1.8e-10 70.9 41 82.9
RcHm_v2.0_Chr6g0249241 Rosa chinensis HOM05D005117 ORTHO05D005956 3.0e-10 70.1 40 77.5
SHI49642 Sapria himalayana HOM05D005117 ORTHO05D005956 1.6e-08 64.3 41 68.3


User provided reference genes

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