Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18154_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 2.4e-71 271.9 127 100.0
Ca_30016_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 2.4e-71 271.9 127 100.0
Ca_20563_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 1.1e-28 130.2 81 82.7
Ca_20558_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 1.9e-28 129.4 81 82.7
Ca_30540_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 1.9e-28 129.4 81 82.7
Ca_28305_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 2.8e-27 125.6 81 80.2
Ca_10146_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 1.1e-26 123.6 82 73.2
Psat0s3827g0040 Pisum sativum HOM05D000036 ORTHO05D000441 5.5e-23 111.3 81 69.1
TPR.G17712 Trifolium pratense HOM05D000036 ORTHO05D000441 1.5e-20 103.2 81 67.9
TPR.G17737 Trifolium pratense HOM05D000036 ORTHO05D000441 4.3e-20 101.7 81 65.4
Lj5g0018266 Lotus japonicus HOM05D000036 ORTHO05D000441 5.7e-20 101.3 55 76.4
Glyma.07G026600 Glycine max HOM05D000036 ORTHO05D000441 2.8e-19 99.0 81 63.0
Lj1g0008492 Lotus japonicus HOM05D000036 ORTHO05D000441 2.8e-19 99.0 56 75.0
Glyma.07G024200 Glycine max HOM05D000036 ORTHO05D000441 3.7e-19 98.6 81 61.7
Lj3g0023271 Lotus japonicus HOM05D000036 ORTHO05D000441 3.7e-19 98.6 81 64.2
Medtr1g083470 Medicago truncatula HOM05D000036 ORTHO05D000441 4.8e-19 98.2 81 64.2
Medtr1g083500 Medicago truncatula HOM05D000036 ORTHO05D000441 4.8e-19 98.2 81 64.2
Glyma.07G024300 Glycine max HOM05D000036 ORTHO05D000441 6.3e-19 97.8 55 70.9
Glyma.07G024500 Glycine max HOM05D000036 ORTHO05D000441 6.3e-19 97.8 55 70.9
Glyma.07G024600 Glycine max HOM05D000036 ORTHO05D000441 1.8e-18 96.3 81 59.3
Lj3g0012240 Lotus japonicus HOM05D000036 ORTHO05D000441 1.8e-18 96.3 81 61.7
Lj5g0009755 Lotus japonicus HOM05D000036 ORTHO05D000441 1.8e-18 96.3 56 71.4
Lj1g0001962 Lotus japonicus HOM05D000036 ORTHO05D000441 4.1e-18 95.1 56 69.6
Phvul.005G104100 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 2.6e-17 92.4 56 67.9
Phvul.005G015000 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 7.6e-17 90.9 56 67.9
Lalb_Chr21g0310531 Lupinus albus HOM05D000036 ORTHO05D000441 1.3e-16 90.1 55 69.1
Medtr1g083490 Medicago truncatula HOM05D000036 ORTHO05D000441 1.3e-16 90.1 56 67.9
Psat0s1175g0080 Pisum sativum HOM05D000036 ORTHO05D000441 1.3e-16 90.1 55 70.9
Lalb_Chr21g0310491 Lupinus albus HOM05D000036 ORTHO05D000441 2.2e-16 89.4 55 67.3
Glyma.01G111400 Glycine max HOM05D000036 ORTHO05D000441 2.9e-16 89.0 56 69.6
Medtr4g005180 Medicago truncatula HOM05D000036 ORTHO05D000441 5.0e-16 88.2 56 66.1
Phvul.005G103500 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 1.1e-15 87.0 56 64.3
Medtr4g005170 Medicago truncatula HOM05D000036 ORTHO05D000441 9.4e-15 84.0 53 66.0
VMungo1080G1847 Vigna mungo HOM05D000036 ORTHO05D000441 6.1e-14 81.3 56 64.3
Phvul.006G088200 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 1.9e-12 76.3 82 47.6
VMungo0920G0001 Vigna mungo HOM05D000036 ORTHO05D000441 2.5e-12 75.9 53 62.3
arahy.Tifrunner.gnm1.ann1.BE8ZR6 Arachis hypogaea HOM05D000036 ORTHO05D000441 5.7e-12 74.7 82 52.4
arahy.Tifrunner.gnm1.ann1.YB1YB0 Arachis hypogaea HOM05D000036 ORTHO05D000441 5.7e-12 74.7 82 52.4
arahy.Tifrunner.gnm1.ann1.33ER1V Arachis hypogaea HOM05D000036 ORTHO05D000441 1.3e-11 73.6 82 52.4
arahy.Tifrunner.gnm1.ann1.GRKV10 Arachis hypogaea HOM05D000036 ORTHO05D000441 1.7e-11 73.2 82 52.4
Glyma.10G150700 Glycine max HOM05D000036 ORTHO05D000441 6.3e-11 71.2 82 50.0
Lj1g0014098 Lotus japonicus HOM05D000036 ORTHO05D000441 6.3e-11 71.2 81 46.9
Medtr7g112590 Medicago truncatula HOM05D000036 ORTHO05D000441 6.3e-11 71.2 81 46.9
Medtr1g083510 Medicago truncatula HOM05D000036 ORTHO05D000441 8.2e-11 70.9 79 49.4
Ca_09336_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 1.4e-10 70.1 80 46.2
CsaV3_6G023840 Cucumis sativus L. HOM05D000036 ORTHO05D000441 3.1e-10 68.9 87 46.0
TPR.G17718 Trifolium pratense HOM05D000036 ORTHO05D000441 4.1e-10 68.6 82 48.8
VMungo0540G1867 Vigna mungo HOM05D000036 ORTHO05D000441 4.1e-10 68.6 82 46.3
Thhalv10003734m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 5.3e-10 68.2 78 43.6
Ca_10147_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000441 9.1e-10 67.4 81 48.1
Lalb_Chr15g0077481 Lupinus albus HOM05D000036 ORTHO05D000441 9.1e-10 67.4 83 44.6
Glyma.20G237800 Glycine max HOM05D000036 ORTHO05D000441 1.2e-09 67.0 70 51.4
Potri.013G013400 Populus trichocarpa HOM05D000036 ORTHO05D000441 1.2e-09 67.0 86 45.3
TPR.G1624 Trifolium pratense HOM05D000036 ORTHO05D000441 2.0e-09 66.2 77 42.9
Carub.0006s2471 Capsella rubella HOM05D000036 ORTHO05D000441 2.6e-09 65.9 78 46.2
Sed0026132 Sechium edule HOM05D000036 ORTHO05D000441 2.6e-09 65.9 86 45.3
Carub.0003s0493 Capsella rubella HOM05D000036 ORTHO05D000441 3.4e-09 65.5 77 44.2
ClCG06G004960 Citrullus lanatus HOM05D000036 ORTHO05D000441 4.5e-09 65.1 88 43.2
Peaxi162Scf00901g00417 Petunia axillaris HOM05D000036 ORTHO05D000441 4.5e-09 65.1 80 41.2
CARHR186350 Cardamine hirsuta HOM05D000036 ORTHO05D000441 7.7e-09 64.3 80 46.2
Psat3g012560 Pisum sativum HOM05D000036 ORTHO05D000441 7.7e-09 64.3 81 39.5
AT3G05610 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.0e-08 63.9 77 42.9
BraA01t04484Z Brassica rapa HOM05D000036 ORTHO05D000441 1.3e-08 63.5 77 41.6
Lalb_Chr21g0310511 Lupinus albus HOM05D000036 ORTHO05D029958 1.3e-08 63.5 81 42.0
BolC1t05682H Brassica oleracea HOM05D000036 ORTHO05D000441 1.7e-08 63.2 77 41.6
Cc00_g28760 Coffea canephora HOM05D000036 ORTHO05D000441 1.7e-08 63.2 82 47.6
Sabra13G0012000 Salix brachista HOM05D000036 ORTHO05D000441 1.7e-08 63.2 86 41.9
Haze_04115 Corylus avellana HOM05D000036 ORTHO05D000441 2.2e-08 62.8 82 42.7
Sp2g20990 Schrenkiella parvula HOM05D000036 ORTHO05D000441 2.2e-08 62.8 80 46.2
Actinidia21503 Actinidia chinensis HOM05D000036 ORTHO05D000441 2.9e-08 62.4 80 43.8
Cfa006655 Carpinus fangiana HOM05D000036 ORTHO05D000441 2.9e-08 62.4 82 42.7
MELO3C021311.2 Cucumis melo HOM05D000036 ORTHO05D000441 2.9e-08 62.4 86 43.0
Glyma.19G231500 Glycine max HOM05D000036 ORTHO05D000441 2.9e-08 62.4 81 44.4
AL6G39060 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 3.8e-08 62.0 80 43.8
A06p37250 Brassica napus HOM05D000036 ORTHO05D000441 3.8e-08 62.0 77 44.2
BraA06t26649Z Brassica rapa HOM05D000036 ORTHO05D000441 3.8e-08 62.0 77 44.2
Lalb_Chr04g0260581 Lupinus albus HOM05D000036 ORTHO05D000441 3.8e-08 62.0 82 42.7
Cpa.g.sc48.111 Carica papaya HOM05D000036 ORTHO05D000441 5.0e-08 61.6 82 43.9
Sabra05G0028900 Salix brachista HOM05D000036 ORTHO05D000441 5.0e-08 61.6 86 43.0
Sed0005378 Sechium edule HOM05D000036 ORTHO05D000441 5.0e-08 61.6 84 38.1
THA.LOC104818732 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 8.5e-08 60.8 82 45.1
BolC7t44647H Brassica oleracea HOM05D000036 ORTHO05D000441 1.1e-07 60.5 77 42.9
CiPaw.07G023700 Carya illinoinensis HOM05D000036 ORTHO05D000441 1.1e-07 60.5 86 44.2
Phvul.007G198100 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 1.1e-07 60.5 81 42.0
BcaNung04744 Brassica carinata HOM05D000036 ORTHO05D000441 1.4e-07 60.1 77 42.9
BraA05t22953Z Brassica rapa HOM05D000036 ORTHO05D000441 1.4e-07 60.1 79 44.3
Hma1.2p1_0078F.1_g040350 Hydrangea macrophylla HOM05D000036 ORTHO05D000441 1.4e-07 60.1 81 44.4
MD16G1164300 Malus domestica HOM05D000036 ORTHO05D000441 1.4e-07 60.1 80 45.0
Nitab4.5_0001097g0120 Nicotiana tabacum HOM05D000036 ORTHO05D000441 1.4e-07 60.1 74 45.9
RcHm_v2.0_Chr4g0423371 Rosa chinensis HOM05D000036 ORTHO05D000441 1.4e-07 60.1 77 40.3
C09p05950 Brassica napus HOM05D000036 ORTHO05D000441 1.9e-07 59.7 82 42.7
BolC9t53520H Brassica oleracea HOM05D000036 ORTHO05D000441 1.9e-07 59.7 82 42.7
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 1.9e-07 59.7 80 40.0
Ciclev10000415m.g Citrus clementina HOM05D000036 ORTHO05D000441 1.9e-07 59.7 83 38.6
MD13G1164600 Malus domestica HOM05D000036 ORTHO05D000441 1.9e-07 59.7 72 48.6
Potri.005G022900 Populus trichocarpa HOM05D000036 ORTHO05D000441 1.9e-07 59.7 86 41.9
RcHm_v2.0_Chr2g0115181 Rosa chinensis HOM05D000036 ORTHO05D000441 1.9e-07 59.7 77 39.0
Sed0023126 Sechium edule HOM05D000036 ORTHO05D000441 1.9e-07 59.7 84 38.1
Thhalv10020314m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 2.5e-07 59.3 77 39.0
FAN07G2630 Fragaria x ananassa HOM05D000036 ORTHO05D000441 2.5e-07 59.3 77 39.0
Nitab4.5_0011001g0020 Nicotiana tabacum HOM05D000036 ORTHO05D000441 2.5e-07 59.3 74 44.6
BcaB04g19691 Brassica carinata HOM05D000036 ORTHO05D000441 3.2e-07 58.9 79 43.0
FAN12G3034 Fragaria x ananassa HOM05D000036 ORTHO05D000441 3.2e-07 58.9 77 39.0
Psat6g151280 Pisum sativum HOM05D000036 ORTHO05D000441 3.2e-07 58.9 82 41.5
TWI12G0350 Tripterygium wilfordii HOM05D000036 ORTHO05D000441 3.2e-07 58.9 60 48.3
AT5G27870 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 4.2e-07 58.5 78 41.0
Duzib177G0645 Durio zibethinus HOM05D000036 ORTHO05D000441 4.2e-07 58.5 80 42.5
Rhsim05G0137000 Rhododendron simsii HOM05D000036 ORTHO05D000441 4.2e-07 58.5 80 41.2
Sed0017048 Sechium edule HOM05D000036 ORTHO05D000441 4.2e-07 58.5 85 42.4
Aa31LG11G9620 Aethionema arabicum HOM05D000036 ORTHO05D000441 5.5e-07 58.2 78 44.9
Aqoxy2G01642 Aquilegia oxysepala HOM05D000036 ORTHO05D000441 5.5e-07 58.2 89 37.1
CiPaw.01G145400 Carya illinoinensis HOM05D000036 ORTHO05D000441 5.5e-07 58.2 82 39.0
TWI36G0655 Tripterygium wilfordii HOM05D000036 ORTHO05D000441 5.5e-07 58.2 60 46.7
BcaC04g23647 Brassica carinata HOM05D000036 ORTHO05D000441 7.2e-07 57.8 78 41.0
A09p05470 Brassica napus HOM05D000036 ORTHO05D000441 7.2e-07 57.8 78 41.0
BraA09t36185Z Brassica rapa HOM05D000036 ORTHO05D000441 7.2e-07 57.8 78 41.0
CiPaw.02G079800 Carya illinoinensis HOM05D000036 ORTHO05D000441 7.2e-07 57.8 84 41.7
Manes.08G115500 Manihot esculenta HOM05D000036 ORTHO05D000441 7.2e-07 57.8 80 38.8
Aa31LG5G16030 Aethionema arabicum HOM05D000036 ORTHO05D000441 9.4e-07 57.4 83 43.4
MELO3C006683.2 Cucumis melo HOM05D000036 ORTHO05D000441 9.4e-07 57.4 84 36.9
CsaV3_1G038630 Cucumis sativus L. HOM05D000036 ORTHO05D000441 9.4e-07 57.4 84 36.9
Prupe.1G123700 Prunus persica HOM05D000036 ORTHO05D000441 1.2e-06 57.0 77 44.2
Actinidia13387 Actinidia chinensis HOM05D000036 ORTHO05D000441 1.6e-06 56.6 84 42.9
Haze_01166 Corylus avellana HOM05D000036 ORTHO05D000441 1.6e-06 56.6 80 40.0
FAN12G4186 Fragaria x ananassa HOM05D000036 ORTHO05D000441 1.6e-06 56.6 77 37.7
Prupe.1G123500 Prunus persica HOM05D000036 ORTHO05D000441 1.6e-06 56.6 74 45.9
Prupe.1G132300 Prunus persica HOM05D000036 ORTHO05D000441 1.6e-06 56.6 74 45.9
ATR0693G321 Amborella trichopoda HOM05D000036 ORTHO05D000441 2.1e-06 56.2 70 38.6
MELO3C015289.2 Cucumis melo HOM05D000036 ORTHO05D000441 2.1e-06 56.2 84 36.9
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 2.1e-06 56.2 81 40.7
MBI19_g26311_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D000441 2.1e-06 56.2 88 40.9
BcaB04g19254 Brassica carinata HOM05D000036 ORTHO05D000441 2.7e-06 55.8 80 36.2
ClCG03G017190 Citrullus lanatus HOM05D000036 ORTHO05D000095 3.6e-06 55.5 84 35.7
COL.COLO4_10552 Corchorus olitorius HOM05D000036 ORTHO05D000441 3.6e-06 55.5 80 43.8
TAR636G1927 Trochodendron aralioides HOM05D000036 ORTHO05D000441 3.6e-06 55.5 80 40.0
CSS0034123 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000441 4.7e-06 55.1 80 38.8
MD13G1164800 Malus domestica HOM05D000036 ORTHO05D000441 4.7e-06 55.1 82 42.7
vmacro08185 Vaccinium macrocarpon HOM05D000036 ORTHO05D000441 4.7e-06 55.1 79 39.2
THA.LOC104821731 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 6.1e-06 54.7 79 40.5
CANSAT78G2165 Cannabis sativa HOM05D000036 ORTHO05D000441 7.9e-06 54.3 77 40.3
Hma1.2p1_0028F.1_g017770 Hydrangea macrophylla HOM05D000036 ORTHO05D029958 7.9e-06 54.3 84 38.1


User provided reference genes

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