Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29272_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 3.6e-94 348.2 172 100.0
SEGI_01886 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 3.7e-14 82.4 143 36.4
Phvul.003G296200 Phaseolus vulgaris HOM05D005531 ORTHO05D006332 4.8e-14 82.0 143 32.9
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 4.8e-14 82.0 143 32.9
Ca_18643_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 8.2e-14 81.3 143 32.9
Glyma.02G137000 Glycine max HOM05D005531 ORTHO05D006332 8.2e-14 81.3 145 34.5
TPR.G23541 Trifolium pratense HOM05D005531 ORTHO05D006332 8.2e-14 81.3 143 32.9
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 1.1e-13 80.9 145 33.1
Medtr4g087250 Medicago truncatula HOM05D005531 ORTHO05D006332 1.1e-13 80.9 143 32.9
Sp5g10250 Schrenkiella parvula HOM05D005531 ORTHO05D006332 1.1e-13 80.9 143 35.0
BcaNung06967 Brassica carinata HOM05D005531 ORTHO05D006332 1.4e-13 80.5 143 35.0
AUR62023806 Chenopodium quinoa HOM05D005531 ORTHO05D006332 1.4e-13 80.5 148 32.4
HanXRQChr14g0432131 Helianthus annuus HOM05D005531 ORTHO05D006332 1.4e-13 80.5 143 33.6
AUR62002375 Chenopodium quinoa HOM05D005531 ORTHO05D006332 1.8e-13 80.1 144 34.7
A09p45110 Brassica napus HOM05D005531 ORTHO05D006332 2.4e-13 79.7 143 34.3
Thhalv10010410m.g Eutrema salsugineum HOM05D005531 ORTHO05D006332 2.4e-13 79.7 143 33.6
Lj4g0014314 Lotus japonicus HOM05D005531 ORTHO05D006332 2.4e-13 79.7 145 33.1
BolC8t50347H Brassica oleracea HOM05D005531 ORTHO05D006332 3.1e-13 79.3 143 34.3
Sed0016017 Sechium edule HOM05D005531 ORTHO05D006332 3.1e-13 79.3 143 34.3
BcaB01g00451 Brassica carinata HOM05D005531 ORTHO05D006332 4.1e-13 79.0 143 34.3
C08p27300 Brassica napus HOM05D005531 ORTHO05D006332 4.1e-13 79.0 143 34.3
GSVIVG01038136001 Vitis vinifera HOM05D005531 ORTHO05D006332 5.3e-13 78.6 143 33.6
Cpa.g.sc9.358 Carica papaya HOM05D005531 ORTHO05D006332 6.9e-13 78.2 143 32.9
Manes.04G036700 Manihot esculenta HOM05D005531 ORTHO05D006332 6.9e-13 78.2 144 35.4
EL10Ac3g06068 Beta vulgaris HOM05D005531 ORTHO05D006332 9.1e-13 77.8 143 34.3
Oeu021570.1 Olea europaea HOM05D005531 ORTHO05D006332 9.1e-13 77.8 143 33.6
FvH4_5g12060 Fragaria vesca HOM05D005531 ORTHO05D006332 1.2e-12 77.4 158 31.0
FAN04G0151 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-12 77.4 158 31.0
FAN13G1713 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-12 77.4 158 31.0
FAN18G3014 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-12 77.4 158 31.0
FAN18G3485 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-12 77.4 158 31.0
BraA09t39972Z Brassica rapa HOM05D005531 ORTHO05D006332 1.5e-12 77.0 143 33.6
Oeu016608.2 Olea europaea HOM05D005531 ORTHO05D006332 1.5e-12 77.0 143 32.9
Aa31LG10G7090 Aethionema arabicum HOM05D005531 ORTHO05D006332 2.0e-12 76.6 143 32.9
AT3G52050 Arabidopsis thaliana HOM05D005531 ORTHO05D006332 2.0e-12 76.6 143 32.9
Dinv09088 Davidia involucrata HOM05D005531 ORTHO05D006332 2.0e-12 76.6 143 33.6
MCO14G121 Micromonas commoda HOM05D005531 ORTHO05D006332 2.0e-12 76.6 127 34.6
Potri.013G125700 Populus trichocarpa HOM05D005531 ORTHO05D006332 2.0e-12 76.6 165 31.5
ATR0743G039 Amborella trichopoda HOM05D005531 ORTHO05D006332 2.6e-12 76.3 143 34.3
TAR362G0104 Trochodendron aralioides HOM05D005531 ORTHO05D006332 2.6e-12 76.3 143 34.3
CiPaw.01G171100 Carya illinoinensis HOM05D005531 ORTHO05D006332 3.4e-12 75.9 144 32.6
FAN08G1892 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.4e-12 75.9 158 31.0
MD04G1048800 Malus domestica HOM05D005531 ORTHO05D006332 3.4e-12 75.9 148 34.5
TWI15G0620 Tripterygium wilfordii HOM05D005531 ORTHO05D006332 3.4e-12 75.9 143 32.9
MSTRG.22027 Avicennia marina HOM05D005531 ORTHO05D006332 4.5e-12 75.5 143 32.9
Carub.0005s1837 Capsella rubella HOM05D005531 ORTHO05D006332 4.5e-12 75.5 143 31.5
Thecc.04G166800 Theobroma cacao HOM05D005531 ORTHO05D006332 4.5e-12 75.5 143 33.6
AL5G32590 Arabidopsis lyrata HOM05D005531 ORTHO05D006332 5.9e-12 75.1 143 32.2
Cfa015263 Carpinus fangiana HOM05D005531 ORTHO05D006332 5.9e-12 75.1 146 32.9
MELO3C033213.2 Cucumis melo HOM05D005531 ORTHO05D006332 5.9e-12 75.1 144 34.0
CsaV3_4G029900 Cucumis sativus L. HOM05D005531 ORTHO05D006332 5.9e-12 75.1 144 34.0
Eucgr.A00006 Eucalyptus grandis HOM05D005531 ORTHO05D006332 5.9e-12 75.1 144 34.0
HPP92_024943 Vanilla planifolia HOM05D005531 ORTHO05D006332 5.9e-12 75.1 142 31.0
CAN.G87.3 Capsicum annuum HOM05D005531 ORTHO05D006332 7.7e-12 74.7 143 32.2
CDE07G1035 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 7.7e-12 74.7 143 34.3
Sabra13G0104500 Salix brachista HOM05D005531 ORTHO05D006332 7.7e-12 74.7 160 30.6
THA.LOC104817577 Tarenaya hassleriana HOM05D005531 ORTHO05D006332 7.7e-12 74.7 145 33.1
RcHm_v2.0_Chr4g0406021 Rosa chinensis HOM05D005531 ORTHO05D006332 1.3e-11 73.9 143 31.5
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 1.7e-11 73.6 157 32.5
Mapoly0001s0155 Marchantia polymorpha HOM05D005531 ORTHO05D006332 1.7e-11 73.6 173 32.9
Aqoxy1G02291 Aquilegia oxysepala HOM05D005531 ORTHO05D006332 2.2e-11 73.2 143 31.5
ECA238G0637 Erigeron canadensis HOM05D005531 ORTHO05D006332 2.2e-11 73.2 143 31.5
QL10p054586 Quercus lobata HOM05D005531 ORTHO05D006332 2.2e-11 73.2 143 32.2
QL93p1902_0778 Quercus lobata HOM05D005531 ORTHO05D006332 2.2e-11 73.2 143 32.2
CANSAT54G2817 Cannabis sativa HOM05D005531 ORTHO05D006332 2.9e-11 72.8 143 30.1
Ciclev10021434m.g Citrus clementina HOM05D005531 ORTHO05D006332 2.9e-11 72.8 143 32.9
Gohir.A02G090900 Gossypium hirsutum HOM05D005531 ORTHO05D006332 2.9e-11 72.8 143 32.9
COL.COLO4_07535 Corchorus olitorius HOM05D005531 ORTHO05D006332 6.5e-11 71.6 143 32.2
PGR042G0031 Punica granatum HOM05D005531 ORTHO05D006332 6.5e-11 71.6 144 31.9
Sabra13G0105100 Salix brachista HOM05D005531 ORTHO05D006332 6.5e-11 71.6 160 30.0
arahy.Tifrunner.gnm1.ann1.6AY0JN Arachis hypogaea HOM05D005531 ORTHO05D006332 1.1e-10 70.9 114 34.2
arahy.Tifrunner.gnm1.ann1.77ZG52 Arachis hypogaea HOM05D005531 ORTHO05D006332 1.1e-10 70.9 114 34.2
Cc01_g03590 Coffea canephora HOM05D005531 ORTHO05D006332 1.1e-10 70.9 149 31.5
Os03g0227300 Oryza sativa ssp. japonica HOM05D005531 ORTHO05D006332 1.1e-10 70.9 143 30.8
Gohir.D02G109600 Gossypium hirsutum HOM05D005531 ORTHO05D006332 1.4e-10 70.5 143 32.2
Gorai.005G123800 Gossypium raimondii HOM05D005531 ORTHO05D006332 1.4e-10 70.5 143 32.2
Lsat_1_v5_gn_2_38340 Lactuca sativa HOM05D005531 ORTHO05D006332 1.4e-10 70.5 136 31.6
Lalb_Chr16g0384491 Lupinus albus HOM05D005531 ORTHO05D006332 1.4e-10 70.5 114 36.0
MBI08_g25563_MAGBIO Magnolia biondii HOM05D005531 ORTHO05D006332 1.4e-10 70.5 143 32.9
HPP92_024926 Vanilla planifolia HOM05D005531 ORTHO05D006332 1.4e-10 70.5 142 30.3
Actinidia12100 Actinidia chinensis HOM05D005531 ORTHO05D006332 1.9e-10 70.1 143 30.1
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 2.5e-10 69.7 164 29.3
Prupe.1G206500 Prunus persica HOM05D005531 ORTHO05D006332 4.2e-10 68.9 114 34.2
PSO675G8407 Papaver somniferum HOM05D005531 ORTHO05D006332 5.5e-10 68.6 152 32.2
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 9.4e-10 67.8 143 32.2
PSO017G4245 Papaver somniferum HOM05D005531 ORTHO05D006332 1.2e-09 67.4 143 32.2
Hund12388 Selenicereus undatus HOM05D005531 ORTHO05D006332 2.7e-09 66.2 136 30.9
Zm00001eb399280 Zea mays HOM05D005531 ORTHO05D006332 2.7e-09 66.2 150 28.0
Rhsim02G0083700 Rhododendron simsii HOM05D005531 ORTHO05D006332 3.6e-09 65.9 114 34.2
SMO232G0046 Selaginella moellendorffii HOM05D005531 ORTHO05D006332 3.6e-09 65.9 162 32.7
CBR_g41469 Chara braunii HOM05D000019 ORTHO05D009492 4.7e-09 65.5 175 29.7
Nn7g37674 Nelumbo nucifera HOM05D005531 ORTHO05D006332 4.7e-09 65.5 143 30.1
PRCOL_00005660 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 1.8e-08 63.5 168 28.6
Cre03.g205809 Chlamydomonas reinhardtii HOM05D005531 ORTHO05D006332 2.3e-08 63.2 67 46.3
Atru.chr4.1396 Acer truncatum HOM05D005531 ORTHO05D006332 3.9e-08 62.4 114 33.3
SEGI_24465 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 8.8e-08 61.2 126 33.3
Migut.N03071 Erythranthe guttata HOM05D005531 ORTHO05D006332 2.6e-07 59.7 125 31.2
DCAR_028442 Daucus carota HOM05D005531 ORTHO05D006332 3.3e-07 59.3 141 30.5
SGA_v2.0_scaffold25G10999 Striga asiatica HOM05D005531 ORTHO05D006332 5.7e-07 58.5 181 28.7
CSS0024284 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 1.7e-06 57.0 157 28.0
unitig_0.g2525 Utricularia gibba HOM05D005531 ORTHO05D006332 6.3e-06 55.1 148 29.7


User provided reference genes

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