Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29230_v3 Cicer arietinum L. HOM05D002357 ORTHO05D148772 1.7e-171 605.9 303 100.0
Glyma.18G034400 Glycine max HOM05D002357 ORTHO05D002676 1.4e-08 64.7 273 26.7
Glyma.11G223700 Glycine max HOM05D002357 ORTHO05D002676 1.8e-08 64.3 273 26.7
Solyc09g011220.3 Solanum lycopersicum HOM05D002357 ORTHO05D002676 1.8e-08 64.3 267 25.5
TAR623G0425 Trochodendron aralioides HOM05D002357 ORTHO05D002676 2.4e-08 63.9 267 27.0
unitig_27.g25069 Utricularia gibba HOM05D002357 ORTHO05D002676 2.4e-08 63.9 268 28.0
PSO339G4371 Papaver somniferum HOM05D002357 ORTHO05D002676 3.1e-08 63.5 273 25.6
AT3G55590 Arabidopsis thaliana HOM05D002357 ORTHO05D002676 4.1e-08 63.2 267 25.5
Nitab4.5_0000779g0050 Nicotiana tabacum HOM05D002357 ORTHO05D002676 4.1e-08 63.2 266 27.1
Sopen09g005970 Solanum pennellii HOM05D002357 ORTHO05D002676 4.1e-08 63.2 267 25.1
VMungo1383G1094 Vigna mungo HOM05D002357 ORTHO05D002676 4.1e-08 63.2 273 26.4
Migut.F00743 Erythranthe guttata HOM05D002357 ORTHO05D002676 7.0e-08 62.4 232 28.4
Thhalv10025578m.g Eutrema salsugineum HOM05D002357 ORTHO05D002676 7.0e-08 62.4 199 31.2
Lalb_Chr17g0346391 Lupinus albus HOM05D002357 ORTHO05D002676 7.0e-08 62.4 273 26.7
PGSC0003DMG400008891 Solanum tuberosum HOM05D002357 ORTHO05D002676 7.0e-08 62.4 268 25.0
Hma1.2p1_0039F.1_g024640 Hydrangea macrophylla HOM05D002357 ORTHO05D002676 9.1e-08 62.0 235 28.1
TAR636G1448 Trochodendron aralioides HOM05D002357 ORTHO05D002676 9.1e-08 62.0 270 26.3
TAR636G2491 Trochodendron aralioides HOM05D002357 ORTHO05D002676 9.1e-08 62.0 267 27.0
HanXRQChr09g0247091 Helianthus annuus HOM05D002357 ORTHO05D002676 1.2e-07 61.6 267 26.2
Aqoxy1G00834 Aquilegia oxysepala HOM05D002357 ORTHO05D002676 1.5e-07 61.2 233 27.9
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 1.5e-07 61.2 199 30.7
BolC7t46260H Brassica oleracea HOM05D002357 ORTHO05D002676 1.5e-07 61.2 199 30.7
CSS0033764 Camellia sinensis var. sinensis HOM05D002357 ORTHO05D002676 1.5e-07 61.2 233 27.9
CAN.G554.10 Capsicum annuum HOM05D002357 ORTHO05D002676 1.5e-07 61.2 274 25.2
PSO384G3371 Papaver somniferum HOM05D002357 ORTHO05D002676 1.5e-07 61.2 273 25.3
CiPaw.01G292000 Carya illinoinensis HOM05D002357 ORTHO05D002676 2.0e-07 60.8 233 27.9
Lalb_Chr18g0053001 Lupinus albus HOM05D002357 ORTHO05D002676 2.0e-07 60.8 233 28.8
Haze_17126 Corylus avellana HOM05D002357 ORTHO05D002676 2.6e-07 60.5 233 27.9
FAN03G1469 Fragaria x ananassa HOM05D002357 ORTHO05D002676 2.6e-07 60.5 233 27.0
Aqoxy2G02346 Aquilegia oxysepala HOM05D002357 ORTHO05D002676 3.4e-07 60.1 268 26.9
BcaB01g02740 Brassica carinata HOM05D002357 ORTHO05D002676 3.4e-07 60.1 199 29.1
Cpa.g.sc33.165 Carica papaya HOM05D002357 ORTHO05D002676 3.4e-07 60.1 233 27.9
Lj1C943T6 Lonicera japonica HOM05D002357 ORTHO05D002676 3.4e-07 60.1 232 27.2
Sabra08G0044200 Salix brachista HOM05D002357 ORTHO05D002676 3.4e-07 60.1 233 27.9
Sp5g06890 Schrenkiella parvula HOM05D002357 ORTHO05D002676 3.4e-07 60.1 265 25.7
Thecc.05G032900 Theobroma cacao HOM05D002357 ORTHO05D002676 3.4e-07 60.1 265 26.4
Cfa001418 Carpinus fangiana HOM05D002357 ORTHO05D002676 4.5e-07 59.7 233 27.5
Cc02_g07370 Coffea canephora HOM05D002357 ORTHO05D002676 4.5e-07 59.7 231 28.1
Haze_20847 Corylus avellana HOM05D002357 ORTHO05D002676 4.5e-07 59.7 231 27.3
Nitab4.5_0003098g0070 Nicotiana tabacum HOM05D002357 ORTHO05D002676 4.5e-07 59.7 268 25.4
Peaxi162Scf00658g00419 Petunia axillaris HOM05D002357 ORTHO05D002676 4.5e-07 59.7 270 25.2
Sabra08G0003700 Salix brachista HOM05D002357 ORTHO05D002676 4.5e-07 59.7 270 25.9
TAR633G2071 Trochodendron aralioides HOM05D002357 ORTHO05D002676 4.5e-07 59.7 267 26.6
CANSAT35G0571 Cannabis sativa HOM05D002357 ORTHO05D002676 5.9e-07 59.3 233 27.5
CiPaw.09G198100 Carya illinoinensis HOM05D002357 ORTHO05D002676 5.9e-07 59.3 267 26.2
ClCG11G006630 Citrullus lanatus HOM05D002357 ORTHO05D002676 5.9e-07 59.3 267 25.8
MELO3C008241.2 Cucumis melo HOM05D002357 ORTHO05D002676 5.9e-07 59.3 267 26.2
ECA232G0864 Erigeron canadensis HOM05D002357 ORTHO05D002676 5.9e-07 59.3 266 25.9
Nitab4.5_0003362g0030 Nicotiana tabacum HOM05D002357 ORTHO05D002676 5.9e-07 59.3 268 25.0
Potri.010G198800 Populus trichocarpa HOM05D002357 ORTHO05D002676 5.9e-07 59.3 265 25.7
RcHm_v2.0_Chr1g0368511 Rosa chinensis HOM05D002357 ORTHO05D002676 5.9e-07 59.3 233 27.0
Sabra10G0153100 Salix brachista HOM05D002357 ORTHO05D002676 5.9e-07 59.3 265 25.7
SMO347G0343 Selaginella moellendorffii HOM05D002357 ORTHO05D002676 5.9e-07 59.3 273 25.6
Atru.chr12.320 Acer truncatum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.0
Atru.chr12.353 Acer truncatum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.0
Atru.chr8.2047 Acer truncatum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
Atru.chr8.2055 Acer truncatum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
Aa31LG11G5700 Aethionema arabicum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 265 26.4
CAN.G115.4 Capsicum annuum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
Cpa.g.sc454.1 Carica papaya HOM05D002357 ORTHO05D002676 7.7e-07 58.9 271 25.5
Duzib106G0509 Durio zibethinus HOM05D002357 ORTHO05D002676 7.7e-07 58.9 265 26.0
Lalb_Chr10g0104761 Lupinus albus HOM05D002357 ORTHO05D002676 7.7e-07 58.9 273 26.0
Lalb_Chr15g0084511 Lupinus albus HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.5
PSO339G0833 Papaver somniferum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
PSO513G0138 Papaver somniferum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
Peaxi162Scf00584g00016 Petunia axillaris HOM05D002357 ORTHO05D002676 7.7e-07 58.9 234 26.1
Phvul.001G236801 Phaseolus vulgaris HOM05D002357 ORTHO05D002676 7.7e-07 58.9 272 26.1
Solyc03g096730.3 Solanum lycopersicum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
Sopen03g027180 Solanum pennellii HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
PGSC0003DMG400015098 Solanum tuberosum HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.9
TPR.G25856 Trifolium pratense HOM05D002357 ORTHO05D002676 7.7e-07 58.9 233 27.0
ATR0559G104 Amborella trichopoda HOM05D002357 ORTHO05D002676 1.0e-06 58.5 273 26.4
AagrBONN_evm.TU.Sc2ySwM_117.1509 Anthoceros agrestis HOM05D002357 ORTHO05D002676 1.0e-06 58.5 274 27.4
arahy.Tifrunner.gnm1.ann1.DLQL5C Arachis hypogaea HOM05D002357 ORTHO05D002676 1.0e-06 58.5 267 26.6
arahy.Tifrunner.gnm1.ann1.W674VD Arachis hypogaea HOM05D002357 ORTHO05D002676 1.0e-06 58.5 267 26.6
BcaNung04567 Brassica carinata HOM05D002357 ORTHO05D002676 1.0e-06 58.5 199 29.6
BraA03t11460Z Brassica rapa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 183 29.0
Ciclev10012040m.g Citrus clementina HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
FvH4_7g23380 Fragaria vesca HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
FAN01G0410 Fragaria x ananassa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
FAN06G0516 Fragaria x ananassa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
FAN06G4516 Fragaria x ananassa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
FAN10G0498 Fragaria x ananassa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
Glyma.02G250800 Glycine max HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.9
Glyma.14G065900 Glycine max HOM05D002357 ORTHO05D002676 1.0e-06 58.5 267 26.2
LjContig00141g0028232 Lotus japonicus HOM05D002357 ORTHO05D002676 1.0e-06 58.5 265 26.0
Potri.008G060100 Populus trichocarpa HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
Rhsim09G0168600 Rhododendron simsii HOM05D002357 ORTHO05D002676 1.0e-06 58.5 233 27.5
SEGI_36926 Sequoiadendron giganteum HOM05D002357 ORTHO05D002676 1.0e-06 58.5 275 25.1
Actinidia02374 Actinidia chinensis HOM05D002357 ORTHO05D002676 1.3e-06 58.2 233 27.5
BolC4t28259H Brassica oleracea HOM05D002357 ORTHO05D002676 1.3e-06 58.2 196 28.6
Ciclev10033733m.g Citrus clementina HOM05D002357 ORTHO05D002676 1.3e-06 58.2 233 28.8
Manes.10G025000 Manihot esculenta HOM05D002357 ORTHO05D002676 1.3e-06 58.2 233 27.5
QL08p061522 Quercus lobata HOM05D002357 ORTHO05D002676 1.3e-06 58.2 232 27.6
Rhsim03G0136400 Rhododendron simsii HOM05D002357 ORTHO05D002676 1.3e-06 58.2 232 28.0
Sp4g22060 Schrenkiella parvula HOM05D002357 ORTHO05D002676 1.3e-06 58.2 196 29.1
Sed0026845 Sechium edule HOM05D002357 ORTHO05D002676 1.3e-06 58.2 233 27.0
AL4G37250 Arabidopsis lyrata HOM05D002357 ORTHO05D002676 1.7e-06 57.8 196 29.1
arahy.Tifrunner.gnm1.ann1.I9S39B Arachis hypogaea HOM05D002357 ORTHO05D002676 1.7e-06 57.8 267 26.2
arahy.Tifrunner.gnm1.ann1.YDJ0SS Arachis hypogaea HOM05D002357 ORTHO05D002676 1.7e-06 57.8 267 26.2
A03p22280 Brassica napus HOM05D002357 ORTHO05D002676 1.7e-06 57.8 173 29.5
C03p26380 Brassica napus HOM05D002357 ORTHO05D002676 1.7e-06 57.8 173 29.5
BolC3t15023H Brassica oleracea HOM05D002357 ORTHO05D002676 1.7e-06 57.8 173 29.5
BraA05t19629Z Brassica rapa HOM05D002357 ORTHO05D002676 1.7e-06 57.8 196 29.1
CANSAT56G3546 Cannabis sativa HOM05D002357 ORTHO05D002676 1.7e-06 57.8 233 27.0
Phvul.008G230600 Phaseolus vulgaris HOM05D002357 ORTHO05D002676 1.7e-06 57.8 234 28.6
Potri.006G090300 Populus trichocarpa HOM05D002357 ORTHO05D002676 1.7e-06 57.8 233 27.9
THA.LOC104824291 Tarenaya hassleriana HOM05D002357 ORTHO05D002676 1.7e-06 57.8 265 26.4
GSVIVG01016470001 Vitis vinifera HOM05D002357 ORTHO05D002676 1.7e-06 57.8 234 29.1
BcaC02g12111 Brassica carinata HOM05D002357 ORTHO05D002676 2.2e-06 57.4 196 29.6
A05p06620 Brassica napus HOM05D002357 ORTHO05D002676 2.2e-06 57.4 196 29.1
C04p67600 Brassica napus HOM05D002357 ORTHO05D002676 2.2e-06 57.4 196 28.6
Carub.0004s2185 Capsella rubella HOM05D002357 ORTHO05D002676 2.2e-06 57.4 196 29.1
COL.COLO4_14741 Corchorus olitorius HOM05D002357 ORTHO05D002676 2.2e-06 57.4 231 27.3
Prupe.2G240500 Prunus persica HOM05D002357 ORTHO05D002676 2.2e-06 57.4 233 27.0
TAR369G0891 Trochodendron aralioides HOM05D002357 ORTHO05D002676 2.2e-06 57.4 233 26.6
VMungo0647G0710 Vigna mungo HOM05D002357 ORTHO05D002676 2.2e-06 57.4 241 27.8
AT2G39770 Arabidopsis thaliana HOM05D002357 ORTHO05D002676 2.9e-06 57.0 196 29.1
MSTRG.264 Avicennia marina HOM05D002357 ORTHO05D002676 2.9e-06 57.0 233 27.0
BcaNung04569 Brassica carinata HOM05D002357 ORTHO05D002676 2.9e-06 57.0 198 29.3
A04p30260 Brassica napus HOM05D002357 ORTHO05D002676 2.9e-06 57.0 196 28.6
BraA04t18482Z Brassica rapa HOM05D002357 ORTHO05D002676 2.9e-06 57.0 196 28.6
CARHR134630 Cardamine hirsuta HOM05D002357 ORTHO05D002676 2.9e-06 57.0 196 28.6
CiPaw.02G187100 Carya illinoinensis HOM05D002357 ORTHO05D002676 2.9e-06 57.0 232 27.6
Ca_05903_v3 Cicer arietinum L. HOM05D002357 ORTHO05D002676 2.9e-06 57.0 233 27.0
Eucgr.G02988 Eucalyptus grandis HOM05D002357 ORTHO05D002676 2.9e-06 57.0 233 27.0
Thhalv10016850m.g Eutrema salsugineum HOM05D002357 ORTHO05D002676 2.9e-06 57.0 196 28.6
Gohir.A10G223100 Gossypium hirsutum HOM05D002357 ORTHO05D002676 2.9e-06 57.0 233 27.5
Hund14190 Selenicereus undatus HOM05D002357 ORTHO05D002676 2.9e-06 57.0 232 27.6
SEGI_25688 Sequoiadendron giganteum HOM05D002357 ORTHO05D002676 2.9e-06 57.0 292 25.0
Ah.10g037090 Amaranthus hybridus HOM05D002357 ORTHO05D002676 3.8e-06 56.6 267 25.8
ATR0559G321 Amborella trichopoda HOM05D002357 ORTHO05D002676 3.8e-06 56.6 216 28.7
A03p29100 Brassica napus HOM05D002357 ORTHO05D002676 3.8e-06 56.6 198 29.8
C03p35160 Brassica napus HOM05D002357 ORTHO05D002676 3.8e-06 56.6 198 29.8
BolC4t22389H Brassica oleracea HOM05D002357 ORTHO05D002676 3.8e-06 56.6 198 30.3
CDE03G0316 Ceratophyllum demersum HOM05D002357 ORTHO05D002676 3.8e-06 56.6 270 24.4
CsaV3_6G001370 Cucumis sativus L. HOM05D002357 ORTHO05D002676 3.8e-06 56.6 267 25.8
Gohir.D10G235400 Gossypium hirsutum HOM05D002357 ORTHO05D002676 3.8e-06 56.6 233 27.5
Gorai.011G269100 Gossypium raimondii HOM05D002357 ORTHO05D002676 3.8e-06 56.6 233 27.5
Medtr5g080770 Medicago truncatula HOM05D002357 ORTHO05D002676 3.8e-06 56.6 233 26.2
Potri.008G006700 Populus trichocarpa HOM05D002357 ORTHO05D002676 3.8e-06 56.6 270 25.9
Sabra06G0068300 Salix brachista HOM05D002357 ORTHO05D002676 3.8e-06 56.6 233 27.5
Solyc06g051270.3 Solanum lycopersicum HOM05D002357 ORTHO05D002676 3.8e-06 56.6 198 28.8
PGSC0003DMG400015645 Solanum tuberosum HOM05D002357 ORTHO05D002676 3.8e-06 56.6 198 28.8
AagrBONN_evm.TU.Sc2ySwM_228.909 Anthoceros agrestis HOM05D002357 ORTHO05D002676 5.0e-06 56.2 172 31.4
Cc05_g00320 Coffea canephora HOM05D002357 ORTHO05D002676 5.0e-06 56.2 231 26.8
Duzib106G1327 Durio zibethinus HOM05D002357 ORTHO05D002676 5.0e-06 56.2 233 27.9
Duzib114G0381 Durio zibethinus HOM05D002357 ORTHO05D002676 5.0e-06 56.2 233 27.9
THA.LOC104806548 Tarenaya hassleriana HOM05D002357 ORTHO05D002676 5.0e-06 56.2 230 27.8
unitig_61.g26164 Utricularia gibba HOM05D002357 ORTHO05D002676 5.0e-06 56.2 233 27.0
AUR62012144 Chenopodium quinoa HOM05D002357 ORTHO05D002676 6.5e-06 55.8 232 26.7
AUR62040691 Chenopodium quinoa HOM05D002357 ORTHO05D002676 6.5e-06 55.8 232 26.7
COL.COLO4_25505 Corchorus olitorius HOM05D002357 ORTHO05D002676 6.5e-06 55.8 231 27.3
Gohir.A04G084900 Gossypium hirsutum HOM05D002357 ORTHO05D002676 6.5e-06 55.8 173 30.1
Gohir.D04G123800 Gossypium hirsutum HOM05D002357 ORTHO05D002676 6.5e-06 55.8 173 30.1
Gorai.012G106900 Gossypium raimondii HOM05D002357 ORTHO05D002676 6.5e-06 55.8 173 30.1
Sed0006207 Sechium edule HOM05D002357 ORTHO05D002676 6.5e-06 55.8 267 25.1
SGA_v2.0_scaffold108G31004 Striga asiatica HOM05D002357 ORTHO05D002676 6.5e-06 55.8 233 27.0
TWI38G0414 Tripterygium wilfordii HOM05D002357 ORTHO05D002676 6.5e-06 55.8 233 27.5
BraA03t12105Z Brassica rapa HOM05D002357 ORTHO05D002676 8.5e-06 55.5 198 29.3
Hma1.2p1_0026F.1_g016330 Hydrangea macrophylla HOM05D002357 ORTHO05D002676 8.5e-06 55.5 198 28.3
Lj8A78T48 Lonicera japonica HOM05D002357 ORTHO05D002676 8.5e-06 55.5 233 27.0
Psat2g038640 Pisum sativum HOM05D002357 ORTHO05D002676 8.5e-06 55.5 233 26.2
PGR142G2988 Punica granatum HOM05D002357 ORTHO05D002676 8.5e-06 55.5 233 27.5
THA.LOC104810049 Tarenaya hassleriana HOM05D002357 ORTHO05D002676 8.5e-06 55.5 271 25.8


User provided reference genes

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