Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28830_v3 Cicer arietinum L. HOM05D000216 ORTHO05D003518 2.5e-43 178.3 86 100.0
Migut.D01338 Erythranthe guttata HOM05D000216 ORTHO05D003518 9.5e-11 70.1 67 49.3
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.2e-10 69.7 66 48.5
CAN.G1648.11 Capsicum annuum HOM05D000216 ORTHO05D005696 1.6e-10 69.3 67 46.3
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 1.6e-10 69.3 67 46.3
Potri.013G139670 Populus trichocarpa HOM05D000216 ORTHO05D003518 1.6e-10 69.3 67 46.3
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.6e-10 69.3 67 46.3
DCAR_032473 Daucus carota HOM05D000216 ORTHO05D003518 2.8e-10 68.6 67 47.8
MSTRG.22048 Avicennia marina HOM05D000216 ORTHO05D003518 3.6e-10 68.2 67 47.8
RcHm_v2.0_CPg0502421 Rosa chinensis HOM05D000216 ORTHO05D003518 3.6e-10 68.2 67 46.3
Atru.chr13.1804 Acer truncatum HOM05D000216 ORTHO05D003518 4.7e-10 67.8 67 46.3
Atru.chr13.1817 Acer truncatum HOM05D000216 ORTHO05D003518 4.7e-10 67.8 67 46.3
LjContig00318g0019073 Lotus japonicus HOM05D000216 ORTHO05D003518 4.7e-10 67.8 67 47.8
AL2G20950 Arabidopsis lyrata HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
ATCG00160 Arabidopsis thaliana HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BcaC05g28802 Brassica carinata HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BNapus_Darmor_BZH_scaffold_253p00050 Brassica napus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BolSC37t60769H Brassica oleracea HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BolSC45t60877H Brassica oleracea HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BolSC45t60936H Brassica oleracea HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BraSC140t45609Z Brassica rapa HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BraSC143t45680Z Brassica rapa HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BraSC58t46404Z Brassica rapa HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
BraSC59t46514Z Brassica rapa HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
CAN.G1738.10 Capsicum annuum HOM05D000743 ORTHO05D000580 6.1e-10 67.4 67 46.3
CAN.G612.2 Capsicum annuum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
CARHR281910 Cardamine hirsuta HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr00c0300g0573191 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr00c0601g0576521 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr08g0210191 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr10g0282511 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr11g0326621 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQChr13g0414281 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
HanXRQCPg0579811 Helianthus annuus HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Psat6g219440 Pisum sativum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
PGR111G0003 Punica granatum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.1e-10 67.4 67 46.3
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 8.0e-10 67.0 67 44.8
Lalb_Chr01g0008431 Lupinus albus HOM05D000216 ORTHO05D003518 8.0e-10 67.0 67 44.8
Lalb_Chr09g0335351 Lupinus albus HOM05D000216 ORTHO05D003518 8.0e-10 67.0 67 44.8
PSO548G0007 Papaver somniferum HOM05D000216 ORTHO05D003518 8.0e-10 67.0 67 44.8
Pp3c7_4970 Physcomitrium patens HOM05D000216 ORTHO05D003518 8.0e-10 67.0 67 43.3
BraSC179t45791Z Brassica rapa HOM05D000216 ORTHO05D003518 1.4e-09 66.2 62 51.6
CSS0038652 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003518 1.4e-09 66.2 67 44.8
CsaV3_UNG207820 Cucumis sativus L. HOM05D000216 ORTHO05D003518 1.4e-09 66.2 67 44.8
Gohir.A01G128801 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.8e-09 65.9 67 44.8
Gohir.A05G086033 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.8e-09 65.9 67 44.8
LjContig00489g0007578 Lotus japonicus HOM05D000216 ORTHO05D003518 1.8e-09 65.9 67 44.8
Sed0025851 Sechium edule HOM05D000216 ORTHO05D003518 1.8e-09 65.9 67 46.3
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-09 65.5 67 43.3
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-09 65.5 67 43.3
arahy.Tifrunner.gnm1.ann1.D2ZWCD Arachis hypogaea HOM05D000216 ORTHO05D003518 2.3e-09 65.5 67 46.3
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-09 65.5 67 43.3
arahy.Tifrunner.gnm1.ann1.S81HDC Arachis hypogaea HOM05D000216 ORTHO05D003518 2.3e-09 65.5 67 46.3
CAN.G939.11 Capsicum annuum HOM05D000216 ORTHO05D004083 2.3e-09 65.5 67 44.8
Nitab4.5_0000349g0190 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-09 65.5 63 47.6
PGSC0003DMG403017663 Solanum tuberosum HOM05D000216 ORTHO05D003518 2.3e-09 65.5 67 44.8
unitig_91.g26495 Utricularia gibba HOM05D000216 ORTHO05D003518 2.3e-09 65.5 62 51.6
MD09G1229200 Malus domestica HOM05D000216 ORTHO05D003518 3.0e-09 65.1 67 44.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.0e-09 64.7 62 50.0
Ah.10g027610 Amaranthus hybridus HOM05D000216 ORTHO05D003518 5.2e-09 64.3 67 43.3
Ah.10g027790 Amaranthus hybridus HOM05D000216 ORTHO05D003518 5.2e-09 64.3 67 43.3
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 5.2e-09 64.3 67 43.3
Lj2P1239T112 Lonicera japonica HOM05D000216 ORTHO05D003518 5.2e-09 64.3 67 44.8
Solyc09g018555.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 5.2e-09 64.3 67 44.8
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund28912 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.8e-09 63.9 67 43.3
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund29986 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.8e-09 63.9 67 43.3
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
Hund30661 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.8e-09 63.9 67 43.3
Hund30710 Selenicereus undatus HOM05D000216 ORTHO05D003518 6.8e-09 63.9 67 43.3
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.8e-09 63.9 67 43.3
BolSC44t60846H Brassica oleracea HOM05D000216 ORTHO05D003518 8.9e-09 63.5 50 50.0
CiPaw.12G030900 Carya illinoinensis HOM05D000216 ORTHO05D003518 8.9e-09 63.5 67 43.3
AUR62030121 Chenopodium quinoa HOM05D000216 ORTHO05D003518 8.9e-09 63.5 67 43.3
AUR62041876 Chenopodium quinoa HOM05D000216 ORTHO05D003518 8.9e-09 63.5 67 43.3
HanXRQChr13g0415481 Helianthus annuus HOM05D000216 ORTHO05D003518 8.9e-09 63.5 50 50.0
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 8.9e-09 63.5 67 43.3
Psat2g044400 Pisum sativum HOM05D000216 ORTHO05D003518 1.2e-08 63.2 66 43.9
Sed0001731 Sechium edule HOM05D000216 ORTHO05D003518 1.2e-08 63.2 67 44.8
HanXRQChr14g0454981 Helianthus annuus HOM05D000216 ORTHO05D003518 1.5e-08 62.8 67 43.3
Medtr4g051110 Medicago truncatula HOM05D000216 ORTHO05D003518 1.5e-08 62.8 67 43.3
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 2.0e-08 62.4 67 41.8
QL93p1261_0001 Quercus lobata HOM05D000216 ORTHO05D003518 2.0e-08 62.4 62 48.4
arahy.Tifrunner.gnm1.ann1.RU7F0N Arachis hypogaea HOM05D000216 ORTHO05D003518 2.6e-08 62.0 62 46.8
Sed0001459 Sechium edule HOM05D000216 ORTHO05D003518 2.6e-08 62.0 50 50.0
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 2.6e-08 62.0 62 48.4
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.6e-08 62.0 67 41.8
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.6e-08 62.0 61 49.2
Ah.10g028510 Amaranthus hybridus HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Ah.11g051390 Amaranthus hybridus HOM05D000013 ORTHO05D000011 3.4e-08 61.6 67 41.8
Zm00001eb226420 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb271620 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb435260 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb435470 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb435740 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb436820 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb437140 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb437250 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb437790 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb438320 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb441580 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
Zm00001eb442730 Zea mays HOM05D000216 ORTHO05D003518 3.4e-08 61.6 67 41.8
BolSC29t60450H Brassica oleracea HOM05D000216 ORTHO05D003518 4.4e-08 61.2 49 46.9
PSO170G5124 Papaver somniferum HOM05D000216 ORTHO05D003518 4.4e-08 61.2 62 45.2
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 7.5e-08 60.5 67 43.3
AUR62030169 Chenopodium quinoa HOM05D000216 ORTHO05D003518 9.8e-08 60.1 67 41.8
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.8e-08 60.1 50 46.0
BraSC151t45694Z Brassica rapa HOM05D000216 ORTHO05D003518 1.3e-07 59.7 46 54.3
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 1.7e-07 59.3 45 53.3
AUR62021207 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.7e-07 59.3 67 40.3
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 1.7e-07 59.3 67 43.3
ATR0329G024 Amborella trichopoda HOM05D000216 ORTHO05D003518 2.2e-07 58.9 67 41.8
Lsat_1_v5_gn_4_163961 Lactuca sativa HOM05D000216 ORTHO05D003518 2.2e-07 58.9 64 42.2
HanXRQChr04g0097421 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-07 58.5 67 40.3
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.8e-07 58.5 61 45.9
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.8e-07 58.5 62 46.8
MD16G1263400 Malus domestica HOM05D000216 ORTHO05D003518 3.7e-07 58.2 67 38.8
Oeu039796.1 Olea europaea HOM05D000216 ORTHO05D003518 3.7e-07 58.2 67 38.8
HPP92_007918 Vanilla planifolia HOM05D000216 ORTHO05D003518 4.9e-07 57.8 67 38.8
Lalb_Chr06g0172991 Lupinus albus HOM05D000216 ORTHO05D003518 1.1e-06 56.6 50 42.0
Lalb_Chr23g0274561 Lupinus albus HOM05D000216 ORTHO05D003518 1.1e-06 56.6 51 43.1
Oeu012801.1 Olea europaea HOM05D000216 ORTHO05D003518 2.4e-06 55.5 67 35.8
Hund04026 Selenicereus undatus HOM05D000216 ORTHO05D003518 5.4e-06 54.3 67 38.8


User provided reference genes

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