Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28811_v3 Cicer arietinum L. HOM05D001026 ORTHO05D148174 2.8e-72 275.0 123 100.0
SMO143G0219 Selaginella moellendorffii HOM05D001026 ORTHO05D007776 2.7e-11 72.4 124 30.6
Pp3c14_11860 Physcomitrium patens HOM05D001026 ORTHO05D003027 1.8e-10 69.7 126 34.1
Mapoly0016s0146 Marchantia polymorpha HOM05D001026 ORTHO05D003027 5.1e-10 68.2 123 34.1
SEGI_02786 Sequoiadendron giganteum HOM05D001026 ORTHO05D003027 5.1e-10 68.2 99 36.4
SMO367G0997 Selaginella moellendorffii HOM05D001026 ORTHO05D003027 2.0e-09 66.2 120 33.3
AUR62027816 Chenopodium quinoa HOM05D001026 ORTHO05D003027 2.6e-09 65.9 133 34.6
PRCOL_00003870 Prasinoderma coloniale HOM05D001026 ORTHO05D003027 3.3e-09 65.5 76 44.7
CBR_g640 Chara braunii HOM05D001026 ORTHO05D003027 4.4e-09 65.1 144 32.6
Nn4g26174 Nelumbo nucifera HOM05D001026 ORTHO05D007776 5.7e-09 64.7 123 30.9
Cfa006105 Carpinus fangiana HOM05D001026 ORTHO05D007776 7.4e-09 64.3 126 34.1
Zm00001eb315710 Zea mays HOM05D001026 ORTHO05D003027 1.3e-08 63.5 84 41.7
AagrBONN_evm.TU.Sc2ySwM_228.4732 Anthoceros agrestis HOM05D001026 ORTHO05D003027 1.7e-08 63.2 123 32.5
AUR62018975 Chenopodium quinoa HOM05D001026 ORTHO05D003027 1.7e-08 63.2 133 33.8
Sc14g0001410 Simmondsia chinensis HOM05D001026 ORTHO05D003027 1.7e-08 63.2 96 32.3
CBR_g22242 Chara braunii HOM05D001026 ORTHO05D007776 2.2e-08 62.8 121 33.1
Pp3c8_12820 Physcomitrium patens HOM05D001026 ORTHO05D007776 2.2e-08 62.8 124 33.1
Nn5g29991 Nelumbo nucifera HOM05D001026 ORTHO05D003027 2.8e-08 62.4 82 43.9
EL10Ac1g01143 Beta vulgaris HOM05D001026 ORTHO05D003027 3.7e-08 62.0 134 34.3
Haze_04745 Corylus avellana HOM05D001026 ORTHO05D007776 4.8e-08 61.6 126 32.5
EL10Ac8g18322 Beta vulgaris HOM05D001026 ORTHO05D003027 8.2e-08 60.8 127 26.0
Hund26992 Selenicereus undatus HOM05D001026 ORTHO05D003027 1.1e-07 60.5 133 33.8
Ah.05g169650 Amaranthus hybridus HOM05D001026 ORTHO05D003027 1.4e-07 60.1 134 35.1
ATR0626G365 Amborella trichopoda HOM05D001026 ORTHO05D003027 1.8e-07 59.7 130 32.3
AagrBONN_evm.TU.Sc2ySwM_344.2278 Anthoceros agrestis HOM05D001026 ORTHO05D003027 1.8e-07 59.7 121 34.7
MELO3C017391.2 Cucumis melo HOM05D001026 ORTHO05D003027 1.8e-07 59.7 99 30.3
ClCG06G013990 Citrullus lanatus HOM05D001026 ORTHO05D003027 2.4e-07 59.3 105 31.4
CiPaw.15G045600 Carya illinoinensis HOM05D001026 ORTHO05D003027 3.1e-07 58.9 85 40.0
MBI02_g10704_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 3.1e-07 58.9 86 40.7
MSTRG.5953 Avicennia marina HOM05D001026 ORTHO05D003027 4.1e-07 58.5 99 31.3
CsaV3_1G032200 Cucumis sativus L. HOM05D001026 ORTHO05D003027 4.1e-07 58.5 99 30.3
Hma1.2p1_1613F.1_g293630 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 4.1e-07 58.5 52 53.8
PSO700G0091 Papaver somniferum HOM05D001026 ORTHO05D003027 4.1e-07 58.5 86 43.0
ATR0684G064 Amborella trichopoda HOM05D001026 ORTHO05D003027 5.3e-07 58.2 87 42.5
Mapoly0105s0013 Marchantia polymorpha HOM05D001026 ORTHO05D007776 5.3e-07 58.2 124 29.8
unitig_578.g15826 Utricularia gibba HOM05D001026 ORTHO05D003027 5.3e-07 58.2 99 32.3
Ah.09g230140 Amaranthus hybridus HOM05D001026 ORTHO05D003027 7.0e-07 57.8 101 28.7
Manes.18G063352 Manihot esculenta HOM05D001026 ORTHO05D003027 7.0e-07 57.8 86 43.0
PGR044G2410 Punica granatum HOM05D001026 ORTHO05D003027 7.0e-07 57.8 96 30.2
Aqoxy6G00080 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 9.1e-07 57.4 87 42.5
Dinv44806 Davidia involucrata HOM05D001026 ORTHO05D003027 9.1e-07 57.4 86 38.4
Nn8g41047 Nelumbo nucifera HOM05D001026 ORTHO05D003027 9.1e-07 57.4 122 28.7
Os09g0469400 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D003027 9.1e-07 57.4 125 36.0
CANSAT64G2664 Cannabis sativa HOM05D001026 ORTHO05D003027 1.2e-06 57.0 86 41.9
Ciclev10007489m.g Citrus clementina HOM05D001026 ORTHO05D003027 1.2e-06 57.0 91 30.8
Cc06_g22150 Coffea canephora HOM05D001026 ORTHO05D003027 1.2e-06 57.0 52 42.3
HanXRQChr09g0248901 Helianthus annuus HOM05D001026 ORTHO05D003027 1.2e-06 57.0 86 37.2
Solyc06g009220.4 Solanum lycopersicum HOM05D001026 ORTHO05D003027 1.2e-06 57.0 81 38.3
Sopen06g003990 Solanum pennellii HOM05D001026 ORTHO05D003027 1.2e-06 57.0 81 38.3
Cc10_g11550 Coffea canephora HOM05D001026 ORTHO05D003027 1.5e-06 56.6 94 33.0
ECA232G0643 Erigeron canadensis HOM05D001026 ORTHO05D003027 1.5e-06 56.6 86 40.7
MBI16_g18205_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 1.5e-06 56.6 112 28.6
PSO447G0331 Papaver somniferum HOM05D001026 ORTHO05D003027 1.5e-06 56.6 86 43.0
Sed0020974 Sechium edule HOM05D001026 ORTHO05D003027 1.5e-06 56.6 81 40.7
unitig_578.g16559 Utricularia gibba HOM05D001026 ORTHO05D003027 1.5e-06 56.6 86 39.5
Cfa017894 Carpinus fangiana HOM05D001026 ORTHO05D005232 2.0e-06 56.2 81 40.7
Haze_18256 Corylus avellana HOM05D001026 ORTHO05D003027 2.0e-06 56.2 81 39.5
DCAR_019290 Daucus carota HOM05D001026 ORTHO05D003027 2.0e-06 56.2 87 40.2
Sed0017236 Sechium edule HOM05D001026 ORTHO05D003027 2.0e-06 56.2 96 31.2
GSVIVG01009087001 Vitis vinifera HOM05D001026 ORTHO05D003027 2.0e-06 56.2 86 40.7
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 2.6e-06 55.8 91 31.9
Migut.J00824 Erythranthe guttata HOM05D001026 ORTHO05D003027 2.6e-06 55.8 127 28.3
Eucgr.C02189 Eucalyptus grandis HOM05D001026 ORTHO05D003027 2.6e-06 55.8 91 30.8
SalBow6G3178 Salvia bowleyana HOM05D001026 ORTHO05D003027 2.6e-06 55.8 96 31.2
ClCG11G014330 Citrullus lanatus HOM05D001026 ORTHO05D005232 3.4e-06 55.5 81 38.3
Ciclev10000347m.g Citrus clementina HOM05D001026 ORTHO05D003027 3.4e-06 55.5 87 41.4
Migut.C00087 Erythranthe guttata HOM05D001026 ORTHO05D003027 3.4e-06 55.5 79 40.5
Peaxi162Scf00937g00013 Petunia axillaris HOM05D001026 ORTHO05D003027 3.4e-06 55.5 81 37.0
RcHm_v2.0_Chr7g0238421 Rosa chinensis HOM05D001026 ORTHO05D003027 3.4e-06 55.5 86 38.4
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 4.5e-06 55.1 94 29.8
Mapoly0118s0006 Marchantia polymorpha HOM05D001026 ORTHO05D003027 4.5e-06 55.1 85 38.8
Sabra02G0079100 Salix brachista HOM05D001026 ORTHO05D003027 4.5e-06 55.1 86 36.0
Sp4g22240 Schrenkiella parvula HOM05D001026 ORTHO05D003027 4.5e-06 55.1 91 29.7
TPR.G25465 Trifolium pratense HOM05D001026 ORTHO05D003027 4.5e-06 55.1 96 31.2
Aqoxy7G02694 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 5.9e-06 54.7 99 28.3
Cpa.g.sc36.185 Carica papaya HOM05D001026 ORTHO05D003027 5.9e-06 54.7 86 39.5
Cc10_g06640 Coffea canephora HOM05D001026 ORTHO05D003027 5.9e-06 54.7 87 41.4
CsaV3_3G047730 Cucumis sativus L. HOM05D001026 ORTHO05D003027 5.9e-06 54.7 81 39.5
Gohir.D05G226200 Gossypium hirsutum HOM05D001026 ORTHO05D003027 5.9e-06 54.7 86 37.2
MD15G1376800 Malus domestica HOM05D001026 ORTHO05D003027 5.9e-06 54.7 86 39.5
PSO170G5814 Papaver somniferum HOM05D001026 ORTHO05D003027 5.9e-06 54.7 94 29.8
SalBow7G2792 Salvia bowleyana HOM05D001026 ORTHO05D003027 5.9e-06 54.7 86 39.5
C04p07570 Brassica napus HOM05D001026 ORTHO05D003027 7.7e-06 54.3 91 29.7
BolC4t22374H Brassica oleracea HOM05D001026 ORTHO05D003027 7.7e-06 54.3 91 29.7
Cpa.g.sc115.45 Carica papaya HOM05D001026 ORTHO05D003027 7.7e-06 54.3 96 32.3
Cfa020723 Carpinus fangiana HOM05D001026 ORTHO05D003027 7.7e-06 54.3 94 29.8
CBR_g494 Chara braunii HOM05D001026 ORTHO05D003027 7.7e-06 54.3 83 38.6
ECA236G4714 Erigeron canadensis HOM05D001026 ORTHO05D003027 7.7e-06 54.3 124 26.6
HanXRQChr05g0136381 Helianthus annuus HOM05D001026 ORTHO05D003027 7.7e-06 54.3 96 27.1
Oeu000971.1 Olea europaea HOM05D001026 ORTHO05D003027 7.7e-06 54.3 96 28.1


User provided reference genes

Program Settings