Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28357_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000563 4.1e-23 110.5 56 100.0
Cpa.g.sc782.1 Carica papaya HOM05D000004 ORTHO05D000563 6.8e-10 66.6 56 60.7
Lalb_Chr19g0128701 Lupinus albus HOM05D000004 ORTHO05D000002 1.2e-09 65.9 47 74.5
TPR.G7214 Trifolium pratense HOM05D000004 ORTHO05D000563 1.2e-09 65.9 47 70.2
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 65.1 56 55.4
Cpa.g.sc303.8 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 65.1 56 57.1
QL11p008013 Quercus lobata HOM05D000004 ORTHO05D000563 2.0e-09 65.1 55 65.5
Cpa.g.sc32.163 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 64.7 56 57.1
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 64.7 56 57.1
TPR.G29503 Trifolium pratense HOM05D000004 ORTHO05D000002 2.6e-09 64.7 42 76.2
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 64.3 56 57.1
Cpa.g.sc4640.1 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 64.3 47 70.2
Cpa.g.sc79.56 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 64.3 56 55.4
Cpa.g.sc172.3 Carica papaya HOM05D000004 ORTHO05D000002 4.4e-09 63.9 56 57.1
Cpa.g.sc826.2 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 63.9 47 63.8
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-09 63.9 55 65.5
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 5.8e-09 63.5 56 57.1
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 5.8e-09 63.5 56 57.1
Cpa.g.sc219.4 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-09 63.5 56 55.4
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-09 63.5 56 55.4
Cpa.g.sc949.1 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-09 63.5 47 70.2
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 5.8e-09 63.5 56 60.7
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.8e-09 63.5 55 60.0
Atru.chr9.178 Acer truncatum HOM05D000004 ORTHO05D000563 7.5e-09 63.2 53 62.3
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 47 63.8
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 56 55.4
Cpa.g.sc159.1 Carica papaya HOM05D000004 ORTHO05D000002 7.5e-09 63.2 56 58.9
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 56 55.4
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 56 55.4
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 56 57.1
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 63.2 56 58.9
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 63.2 55 60.0
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 63.2 55 60.0
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR119G0902 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 63.2 55 60.0
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 63.2 55 60.0
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 63.2 55 60.0
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-09 62.8 56 55.4
Cpa.g.sc28.107 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 62.4 56 53.6
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 62.4 56 57.1
Cpa.g.sc971.1 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 62.4 47 61.7
Cpa.g.sc0.189 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 51.8
Cpa.g.sc138.37 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 53.6
Cpa.g.sc210.9 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 53.6
Cpa.g.sc269.3 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 55.4
Cpa.g.sc303.3 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 55.4
Cpa.g.sc32.165 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 55.4
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 47 59.6
Cpa.g.sc60.66 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 51.8
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 1.7e-08 62.0 56 51.8
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 62.0 56 58.9
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 62.0 56 58.9
Cpa.g.sc210.2 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 57.1
Cpa.g.sc210.3 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 53.6
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
Cpa.g.sc3092.1 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 53.6
Cpa.g.sc372.2 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 53.6
Cpa.g.sc39.67 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 62.5
Cpa.g.sc645.1 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 54 59.3
Cpa.g.sc949.5 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 61.6 56 55.4
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 57.1
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 61.6 56 58.9
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.2e-08 61.6 55 58.2
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-08 61.6 55 58.2
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 61.2 56 58.9
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 61.2 47 59.6
Cpa.g.sc172.1 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 61.2 56 53.6
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 61.2 47 68.1
Cpa.g.sc175.28 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-08 60.8 56 51.8
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-08 60.8 56 51.8
Cpa.g.sc60.41 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-08 60.8 56 60.7
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-08 60.8 56 55.4
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 3.7e-08 60.8 55 58.2
Cpa.g.sc126.28 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 56 53.6
Cpa.g.sc1384.1 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 58 51.7
Cpa.g.sc24.81 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 45 62.2
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 56 53.6
Cpa.g.sc303.7 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 56 51.8
Cpa.g.sc38.14 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 56 51.8
Cpa.g.sc440.2 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 55 54.5
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 55 54.5
Cpa.g.sc45.13 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 60.5 56 62.5
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 60.5 55 58.2
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 60.5 55 58.2
Cpa.g.sc215.10 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 60.1 56 51.8
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 6.4e-08 60.1 56 57.1
Cpa.g.sc28.154 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 60.1 56 53.6
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 60.1 55 52.7
SHI30667 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-08 60.1 47 66.0
Cpa.g.sc102.31 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 59.7 56 53.6
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 59.7 47 59.6
Cpa.g.sc28.99 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 59.7 56 51.8
Cpa.g.sc38.36 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 59.7 56 53.6
Cpa.g.sc60.61 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 59.7 54 53.7
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 8.3e-08 59.7 56 57.1
Cpa.g.sc391.4 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 59.3 56 51.8
Cpa.g.sc41.47 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 59.3 56 57.1
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 59.3 56 50.0
Cpa.g.sc943.4 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 59.3 47 66.0
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-07 59.3 55 56.4
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 1.1e-07 59.3 42 69.0
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-07 58.9 55 56.4
Cpa.g.sc0.192 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.2 47 57.4
Cpa.g.sc225.2 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.2 44 61.4
Cpa.g.sc31.87 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.2 54 53.7
Cpa.g.sc49.152 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.2 54 51.9
Cpa.g.sc60.43 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.2 56 48.2
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 2.4e-07 58.2 46 65.2
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-07 58.2 56 55.4
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-07 58.2 56 55.4
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-07 58.2 56 55.4
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 57.8 56 55.4
Cpa.g.sc0.42 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 57.4 56 55.4
Cpa.g.sc101.17 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 57.4 47 63.8
Cpa.g.sc143.12 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 57.4 51 52.9
Cpa.g.sc207.15 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 57.4 56 50.0
Cpa.g.sc3434.1 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 57.4 56 50.0
Cpa.g.sc0.35 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 56 46.4
Cpa.g.sc2066.1 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 54 51.9
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 56 50.0
Cpa.g.sc35.66 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 54 48.1
Cpa.g.sc71.25 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 56 50.0
Cpa.g.sc78.89 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 56 51.8
Cpa.g.sc880.3 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.0 51 52.9
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 5.4e-07 57.0 55 54.5
SHI40194 Sapria himalayana HOM05D000004 ORTHO05D000563 5.4e-07 57.0 54 51.9
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 5.4e-07 57.0 54 51.9
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 5.4e-07 57.0 54 51.9
Cpa.g.sc41.27 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-07 56.6 56 51.8
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.0e-07 56.6 56 55.4
TAR452G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000563 7.0e-07 56.6 41 70.7
Cpa.g.sc11.128 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 47 66.0
Cpa.g.sc15.39 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 56 55.4
Cpa.g.sc23.28 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 56 50.0
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 56 50.0
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 42 59.5
Cpa.g.sc35.45 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 56.2 51 51.0
PGR102G1518 Punica granatum HOM05D000004 ORTHO05D000563 9.2e-07 56.2 46 65.2
Cpa.g.sc17.151 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-06 55.8 56 48.2
Cpa.g.sc305.2 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 55.8 56 48.2
Cpa.g.sc89.24 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 55.8 44 63.6
Cpa.g.sc135.1 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 55.5 56 46.4
Cpa.g.sc172.9 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 55.5 51 52.9
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 1.6e-06 55.5 48 58.3
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-06 55.5 48 58.3
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 55.1 54 48.1
Cpa.g.sc305.5 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 55.1 54 48.1
VMungo0720G1424 Vigna mungo HOM05D008055 ORTHO05D009927 2.1e-06 55.1 41 68.3
Cpa.g.sc38.5 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 54.7 53 52.8
Cpa.g.sc8.259 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 54.7 51 51.0
Cpa.g.sc92.118 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 54.7 52 51.9
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 2.7e-06 54.7 54 50.0
Cpa.g.sc0.47 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-06 54.3 56 44.6
Cpa.g.sc251.2 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-06 54.3 50 54.0
Cpa.g.sc39.102 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-06 54.3 51 49.0
Cpa.g.sc72.51 Carica papaya HOM05D006162 ORTHO05D000563 3.5e-06 54.3 56 50.0
Cpa.g.sc174.2 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 53.9 56 50.0
Cpa.g.sc207.1 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 53.9 39 59.0
Cpa.g.sc29.191 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 53.9 56 50.0
Cpa.g.sc31.29 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 53.9 56 48.2
THA.LOC104818535 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.6e-06 53.9 56 48.2
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.6e-06 53.9 56 48.2
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-06 53.5 50 56.0
Cpa.g.sc2945.1 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-06 53.5 48 56.2
Cpa.g.sc56.13 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-06 53.5 54 51.9
SHI47923 Sapria himalayana HOM05D000004 ORTHO05D000563 6.0e-06 53.5 54 48.1
SHI48037 Sapria himalayana HOM05D000004 ORTHO05D000563 6.0e-06 53.5 54 48.1
SHI50247 Sapria himalayana HOM05D000004 ORTHO05D000563 6.0e-06 53.5 54 48.1
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 7.8e-06 53.1 45 55.6
Cpa.g.sc330.2 Carica papaya HOM05D000004 ORTHO05D000563 7.8e-06 53.1 56 48.2


User provided reference genes

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