Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28277_v3 Cicer arietinum L. HOM05D000435 ORTHO05D012716 3.0e-55 218.4 120 100.0
TPR.G34448 Trifolium pratense HOM05D000435 ORTHO05D000430 6.5e-42 174.1 120 80.8
Psat3g027640 Pisum sativum HOM05D000435 ORTHO05D000430 5.7e-38 161.0 119 78.2
Medtr7g106880 Medicago truncatula HOM05D000435 ORTHO05D000430 5.3e-36 154.5 117 76.9
Glyma.02G188300 Glycine max HOM05D000435 ORTHO05D000430 2.8e-29 132.1 125 66.4
VMungo0720G1776 Vigna mungo HOM05D000435 ORTHO05D000430 3.7e-29 131.7 129 65.1
Lalb_Chr02g0154221 Lupinus albus HOM05D000435 ORTHO05D000430 1.1e-28 130.2 129 65.9
Phvul.007G265300 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 2.4e-28 129.0 127 63.8
Psat6g087200 Pisum sativum HOM05D000435 ORTHO05D000430 2.0e-27 125.9 128 63.3
CSS0024033 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 5.9e-27 124.4 131 61.1
CSS0028515 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 1.3e-26 123.2 131 60.3
TPR.G21233 Trifolium pratense HOM05D000435 ORTHO05D000430 6.5e-26 120.9 126 61.9
Glyma.10G086800 Glycine max HOM05D000435 ORTHO05D000430 8.5e-26 120.6 125 62.4
Psat2g075680 Pisum sativum HOM05D004351 ORTHO05D005196 1.1e-25 120.2 76 86.8
Sed0023924 Sechium edule HOM05D000435 ORTHO05D000430 1.1e-25 120.2 127 62.2
FAN09G4773 Fragaria x ananassa HOM05D000435 ORTHO05D000430 4.2e-25 118.2 124 64.5
Medtr1g054935 Medicago truncatula HOM05D000435 ORTHO05D000430 4.2e-25 118.2 120 62.5
Atru.chr8.1286 Acer truncatum HOM05D000435 ORTHO05D000430 5.5e-25 117.9 122 63.9
Ca_11654_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 9.4e-25 117.1 120 62.5
FvH4_6g21010 Fragaria vesca HOM05D000435 ORTHO05D000430 9.4e-25 117.1 124 63.7
FAN14G0489 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.4e-25 117.1 124 63.7
Oeu020157.1 Olea europaea HOM05D000435 ORTHO05D000430 9.4e-25 117.1 132 61.4
Ciclev10011143m.g Citrus clementina HOM05D000435 ORTHO05D000430 1.2e-24 116.7 131 61.8
Dinv25080 Davidia involucrata HOM05D000059 ORTHO05D000430 3.6e-24 115.2 134 58.2
FAN05G2031 Fragaria x ananassa HOM05D000435 ORTHO05D000430 3.6e-24 115.2 124 62.9
MD12G1045900 Malus domestica HOM05D000435 ORTHO05D000430 4.7e-24 114.8 130 58.5
Manes.08G037200 Manihot esculenta HOM05D000435 ORTHO05D000430 4.7e-24 114.8 122 60.7
FAN02G3368 Fragaria x ananassa HOM05D000435 ORTHO05D000430 6.1e-24 114.4 124 62.9
Lj5g0020894 Lotus japonicus HOM05D000435 ORTHO05D000430 6.1e-24 114.4 120 59.2
Potri.016G065900 Populus trichocarpa HOM05D000435 ORTHO05D000430 6.1e-24 114.4 133 61.7
Oeu045027.1 Olea europaea HOM05D000435 ORTHO05D000430 1.4e-23 113.2 132 59.8
TWI74G0089 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 1.4e-23 113.2 128 57.8
Cpa.g.sc222.15 Carica papaya HOM05D000435 ORTHO05D000430 1.8e-23 112.8 131 58.0
MSTRG.10412 Avicennia marina HOM05D000435 ORTHO05D000430 3.0e-23 112.1 130 56.9
CiPaw.11G082100 Carya illinoinensis HOM05D000435 ORTHO05D000430 5.2e-23 111.3 131 59.5
Prupe.7G089500 Prunus persica HOM05D000435 ORTHO05D000430 6.7e-23 110.9 130 59.2
Haze_20126 Corylus avellana HOM05D000435 ORTHO05D000430 1.2e-22 110.2 133 60.9
COL.COLO4_29496 Corchorus olitorius HOM05D000435 ORTHO05D000430 1.5e-22 109.8 122 56.6
Sp6g36340 Schrenkiella parvula HOM05D000435 ORTHO05D000430 1.5e-22 109.8 129 55.8
FAN05G4339 Fragaria x ananassa HOM05D000435 ORTHO05D000430 2.0e-22 109.4 124 59.7
AT5G06530 Arabidopsis thaliana HOM05D000435 ORTHO05D000430 2.6e-22 109.0 134 56.0
Duzib093G0068 Durio zibethinus HOM05D000435 ORTHO05D000430 4.4e-22 108.2 132 57.6
Eucgr.K01911 Eucalyptus grandis HOM05D000435 ORTHO05D000430 4.4e-22 108.2 134 58.2
Nitab4.5_0000429g0030 Nicotiana tabacum HOM05D000435 ORTHO05D000430 4.4e-22 108.2 131 56.5
AL6G16620 Arabidopsis lyrata HOM05D000435 ORTHO05D000430 5.7e-22 107.8 135 54.8
C02p02740 Brassica napus HOM05D000435 ORTHO05D000430 5.7e-22 107.8 129 55.8
Carub.0006s0541 Capsella rubella HOM05D000435 ORTHO05D000430 5.7e-22 107.8 135 54.8
TWI53G1860 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 5.7e-22 107.8 128 57.8
BcaB05g21665 Brassica carinata HOM05D000435 ORTHO05D000430 7.5e-22 107.5 130 56.2
CARHR206670 Cardamine hirsuta HOM05D000435 ORTHO05D000430 9.7e-22 107.1 132 55.3
AUR62036323 Chenopodium quinoa HOM05D000435 ORTHO05D000430 9.7e-22 107.1 129 54.3
AUR62038429 Chenopodium quinoa HOM05D000435 ORTHO05D000430 9.7e-22 107.1 129 54.3
Nitab4.5_0002599g0030 Nicotiana tabacum HOM05D000435 ORTHO05D000430 9.7e-22 107.1 131 56.5
Migut.L01842 Erythranthe guttata HOM05D000435 ORTHO05D000430 1.3e-21 106.7 135 55.6
Gohir.A01G135900 Gossypium hirsutum HOM05D000435 ORTHO05D000430 1.3e-21 106.7 132 55.3
Gohir.D01G123000 Gossypium hirsutum HOM05D000435 ORTHO05D000430 1.3e-21 106.7 132 55.3
Gohir.D01G189700 Gossypium hirsutum HOM05D000435 ORTHO05D000430 1.3e-21 106.7 125 56.8
Gorai.002G153900 Gossypium raimondii HOM05D000435 ORTHO05D000430 1.3e-21 106.7 132 55.3
Gorai.002G233500 Gossypium raimondii HOM05D000435 ORTHO05D000430 1.3e-21 106.7 125 56.8
Actinidia37777 Actinidia chinensis HOM05D000435 ORTHO05D000430 2.2e-21 105.9 135 54.8
Duzib128G1358 Durio zibethinus HOM05D000435 ORTHO05D000430 2.2e-21 105.9 124 57.3
Gohir.A01G199700 Gossypium hirsutum HOM05D000435 ORTHO05D000430 2.2e-21 105.9 133 56.4
C09p70240 Brassica napus HOM05D000435 ORTHO05D000430 3.7e-21 105.1 130 55.4
Peaxi162Scf00210g01615 Petunia axillaris HOM05D000435 ORTHO05D000430 3.7e-21 105.1 123 58.5
BolC2t06239H Brassica oleracea HOM05D000435 ORTHO05D000430 4.8e-21 104.8 129 55.0
Cfa020069 Carpinus fangiana HOM05D000435 ORTHO05D000430 4.8e-21 104.8 131 60.3
Aa31sc336G20 Aethionema arabicum HOM05D000435 ORTHO05D000430 6.3e-21 104.4 130 56.2
EL10Ac5g11808 Beta vulgaris HOM05D000435 ORTHO05D000430 6.3e-21 104.4 133 56.4
BcaC06g32563 Brassica carinata HOM05D000435 ORTHO05D000430 6.3e-21 104.4 129 54.3
A10p29870 Brassica napus HOM05D000435 ORTHO05D000430 6.3e-21 104.4 130 55.4
BolC9t59768H Brassica oleracea HOM05D000435 ORTHO05D000430 6.3e-21 104.4 130 55.4
Potri.006G199500 Populus trichocarpa HOM05D000435 ORTHO05D000430 6.3e-21 104.4 130 56.9
GSVIVG01022526001 Vitis vinifera HOM05D000435 ORTHO05D000430 8.3e-21 104.0 122 59.8
Actinidia03854 Actinidia chinensis HOM05D000435 ORTHO05D000430 1.1e-20 103.6 132 53.8
Actinidia03964 Actinidia chinensis HOM05D000435 ORTHO05D000430 1.1e-20 103.6 132 53.8
CANSAT64G1430 Cannabis sativa HOM05D000435 ORTHO05D000430 2.4e-20 102.4 135 55.6
Lj1g0010379 Lotus japonicus HOM05D000435 ORTHO05D000430 4.1e-20 101.7 120 60.0
DCAR_020679 Daucus carota HOM05D000435 ORTHO05D000430 5.3e-20 101.3 129 52.7
Thhalv10012760m.g Eutrema salsugineum HOM05D000435 ORTHO05D000430 7.0e-20 100.9 137 53.3
arahy.Tifrunner.gnm1.ann1.810EMS Arachis hypogaea HOM05D000435 ORTHO05D000430 9.1e-20 100.5 134 54.5
Glyma.03G204800 Glycine max HOM05D000435 ORTHO05D000430 9.1e-20 100.5 131 55.7
Lsat_1_v5_gn_1_56901 Lactuca sativa HOM05D000435 ORTHO05D000430 9.1e-20 100.5 127 52.0
arahy.Tifrunner.gnm1.ann1.NEY80F Arachis hypogaea HOM05D000435 ORTHO05D000430 1.2e-19 100.1 135 54.1
Sopen01g002710 Solanum pennellii HOM05D000435 ORTHO05D000430 1.6e-19 99.8 132 56.8
Phvul.001G198400 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 2.0e-19 99.4 123 57.7
PGR142G3890 Punica granatum HOM05D000435 ORTHO05D000430 2.0e-19 99.4 140 50.7
THA.LOC104826788 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 2.7e-19 99.0 124 56.5
Ah.12g059590 Amaranthus hybridus HOM05D000435 ORTHO05D000430 3.5e-19 98.6 136 52.9
TAR633G2167 Trochodendron aralioides HOM05D000435 ORTHO05D012716 3.5e-19 98.6 120 60.0
arahy.Tifrunner.gnm1.ann1.99ED2B Arachis hypogaea HOM05D000435 ORTHO05D012716 3.8e-18 95.1 127 58.3
ECA248G3236 Erigeron canadensis HOM05D000435 ORTHO05D000430 5.0e-18 94.7 121 52.1
Gohir.A09G132100 Gossypium hirsutum HOM05D000435 ORTHO05D000430 5.0e-18 94.7 136 52.2
QL07p026386 Quercus lobata HOM05D000435 ORTHO05D000430 6.5e-18 94.4 127 50.4
Sabra06G0153400 Salix brachista HOM05D000435 ORTHO05D000430 6.5e-18 94.4 129 55.0
Hund10796 Selenicereus undatus HOM05D000435 ORTHO05D000430 8.5e-18 94.0 134 52.2
CiPaw.09G024000 Carya illinoinensis HOM05D000435 ORTHO05D000430 2.5e-17 92.4 109 55.0
DCAR_016908 Daucus carota HOM05D000435 ORTHO05D000430 2.5e-17 92.4 123 46.3
HanXRQChr11g0347601 Helianthus annuus HOM05D000435 ORTHO05D000430 4.2e-17 91.7 131 51.9
Rhsim03G0058600 Rhododendron simsii HOM05D000435 ORTHO05D000430 5.5e-17 91.3 135 48.9
Gohir.D09G128400 Gossypium hirsutum HOM05D000435 ORTHO05D000430 7.2e-17 90.9 136 50.7
Gorai.006G147000 Gossypium raimondii HOM05D000435 ORTHO05D000430 7.2e-17 90.9 136 50.7
arahy.Tifrunner.gnm1.ann1.T4ZW2M Arachis hypogaea HOM05D000435 ORTHO05D000430 9.4e-17 90.5 126 56.3
Solyc01g006720.4 Solanum lycopersicum HOM05D000435 ORTHO05D000430 9.4e-17 90.5 100 65.0
Cc06_g06960 Coffea canephora HOM05D000435 ORTHO05D000430 1.2e-16 90.1 112 58.0
PGSC0003DMG400021343 Solanum tuberosum HOM05D000435 ORTHO05D000430 1.2e-16 90.1 104 62.5
Aqoxy1G00601 Aquilegia oxysepala HOM05D004133 ORTHO05D004683 3.6e-16 88.6 118 56.8
COL.COLO4_02846 Corchorus olitorius HOM05D000435 ORTHO05D012716 4.7e-16 88.2 72 69.4
ECA233G6042 Erigeron canadensis HOM05D000435 ORTHO05D000430 2.3e-15 85.9 131 51.1
Sc01g0005640 Simmondsia chinensis HOM05D000435 ORTHO05D000430 2.3e-15 85.9 133 50.4
Lsat_1_v5_gn_6_34200 Lactuca sativa HOM05D000435 ORTHO05D000430 5.2e-15 84.7 131 48.1
SGA_v2.0_scaffold41G15770 Striga asiatica HOM05D000435 ORTHO05D000430 5.2e-15 84.7 146 45.9
Nn6g34589 Nelumbo nucifera HOM05D000435 ORTHO05D000430 1.5e-14 83.2 134 51.5
Glyma.19G202200 Glycine max HOM05D000435 ORTHO05D000430 2.0e-14 82.8 116 49.1
Manes.09G041900 Manihot esculenta HOM05D000435 ORTHO05D000430 2.0e-14 82.8 123 48.8
VMungo1383G2447 Vigna mungo HOM05D000435 ORTHO05D000430 2.6e-14 82.4 63 74.6
THA.LOC104823509 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 1.7e-13 79.7 126 46.0
RcHm_v2.0_Chr3g0477391 Rosa chinensis HOM05D000435 ORTHO05D000430 6.3e-13 77.8 74 66.2
HanXRQChr01g0026181 Helianthus annuus HOM05D000435 ORTHO05D000430 4.1e-12 75.1 100 57.0
HPP92_002244 Vanilla planifolia HOM05D000435 ORTHO05D000430 9.1e-12 73.9 130 46.9
PSO339G0312 Papaver somniferum HOM05D000435 ORTHO05D000430 2.0e-11 72.8 123 46.3
Lalb_Chr01g0017721 Lupinus albus HOM05D000435 ORTHO05D000430 4.5e-11 71.6 121 47.1
MBI11_g26201_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D000430 1.0e-10 70.5 119 49.6
Dinv11897 Davidia involucrata HOM05D000435 ORTHO05D000430 6.6e-10 67.8 107 47.7
AL5G32940 Arabidopsis lyrata HOM05D000435 ORTHO05D000430 8.6e-10 67.4 127 43.3
Thhalv10010138m.g Eutrema salsugineum HOM05D000435 ORTHO05D000430 1.5e-09 66.6 117 46.2
HanXRQChr13g0398731 Helianthus annuus HOM05D000435 ORTHO05D000430 1.9e-09 66.2 91 49.5
vmacro07511 Vaccinium macrocarpon HOM05D000435 ORTHO05D000430 3.6e-08 62.0 45 73.3
Aa31LG10G7400 Aethionema arabicum HOM05D000435 ORTHO05D000430 4.7e-08 61.6 118 44.1
DCAR_013460 Daucus carota HOM05D000435 ORTHO05D000430 8.0e-08 60.8 125 36.0
Carub.0005s1867 Capsella rubella HOM05D000435 ORTHO05D000430 1.4e-07 60.1 119 40.3
Psat2g075720 Pisum sativum HOM05D000058 ORTHO05D002699 3.4e-06 55.5 32 87.5
A04p07090 Brassica napus HOM05D002241 ORTHO05D000430 4.4e-06 55.1 132 41.7
BraA04t16406Z Brassica rapa HOM05D002241 ORTHO05D000430 9.8e-06 53.9 132 40.9


User provided reference genes

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