Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28090_v3 Cicer arietinum L. HOM05D005109 ORTHO05D006084 1.8e-194 682.6 374 100.0
TPR.G18473 Trifolium pratense HOM05D005109 ORTHO05D006084 5.0e-133 478.4 387 72.9
Psat6g041760 Pisum sativum HOM05D005109 ORTHO05D006084 8.0e-123 444.5 365 72.3
Medtr1g069855 Medicago truncatula HOM05D005109 ORTHO05D006084 6.4e-120 434.9 375 66.1
Lj5g0011614 Lotus japonicus HOM05D005109 ORTHO05D006084 9.5e-116 421.0 381 65.4
Glyma.10G037400 Glycine max HOM05D005109 ORTHO05D006084 1.4e-111 407.1 384 64.3
Phvul.007G192400 Phaseolus vulgaris HOM05D005109 ORTHO05D006084 6.2e-107 391.7 381 61.4
VMungo0720G0144 Vigna mungo HOM05D005109 ORTHO05D006084 2.0e-105 386.7 366 63.7
Glyma.13G124000 Glycine max HOM05D005109 ORTHO05D006084 1.3e-104 384.0 386 63.0
Lalb_Chr21g0313891 Lupinus albus HOM05D005109 ORTHO05D006084 1.2e-102 377.5 399 59.9
Lalb_Chr06g0170501 Lupinus albus HOM05D005109 ORTHO05D006084 9.9e-89 331.3 439 51.7
arahy.Tifrunner.gnm1.ann1.ZTJ4VR Arachis hypogaea HOM05D005109 ORTHO05D006084 3.9e-85 319.3 379 58.6
arahy.Tifrunner.gnm1.ann1.A1W3C7 Arachis hypogaea HOM05D005109 ORTHO05D006084 8.7e-85 318.2 376 58.8
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 2.5e-84 316.6 267 67.8
Lalb_Chr02g0152441 Lupinus albus HOM05D005109 ORTHO05D006084 4.0e-82 309.3 396 53.0
CiPaw.03G265200 Carya illinoinensis HOM05D005109 ORTHO05D006084 1.8e-69 267.3 397 48.6
QL09p039103 Quercus lobata HOM05D005109 ORTHO05D006084 5.1e-69 265.8 392 49.5
GSVIVG01028346001 Vitis vinifera HOM05D005109 ORTHO05D006084 1.7e-64 250.8 377 48.8
Cfa002435 Carpinus fangiana HOM05D005109 ORTHO05D006084 8.4e-64 248.4 415 46.3
Prupe.8G222600 Prunus persica HOM05D005109 ORTHO05D006084 2.5e-63 246.9 389 48.8
Manes.13G034800 Manihot esculenta HOM05D005109 ORTHO05D006084 9.3e-63 245.0 391 44.8
Dinv34633 Davidia involucrata HOM05D005109 ORTHO05D006084 7.9e-62 241.9 366 47.8
Glyma.03G163800 Glycine max HOM05D005109 ORTHO05D006084 1.8e-61 240.7 384 46.1
Haze_24641 Corylus avellana HOM05D005109 ORTHO05D006084 3.0e-61 240.0 408 45.3
MBI10_g20266_MAGBIO Magnolia biondii HOM05D005109 ORTHO05D006084 8.7e-61 238.4 373 45.8
Manes.12G033000 Manihot esculenta HOM05D005109 ORTHO05D006084 2.5e-60 236.9 396 42.2
Ciclev10024128m.g Citrus clementina HOM05D005109 ORTHO05D006084 7.4e-60 235.3 399 44.6
CSS0032892 Camellia sinensis var. sinensis HOM05D005109 ORTHO05D006084 1.6e-59 234.2 379 43.8
MD05G1196200 Malus domestica HOM05D005109 ORTHO05D006084 2.2e-59 233.8 395 45.8
Potri.002G037800 Populus trichocarpa HOM05D005109 ORTHO05D006084 2.2e-59 233.8 393 46.8
RcHm_v2.0_Chr6g0287941 Rosa chinensis HOM05D005109 ORTHO05D006084 2.8e-59 233.4 416 44.2
Thecc.01G257200 Theobroma cacao HOM05D005109 ORTHO05D006084 2.8e-59 233.4 385 46.5
Cc01_g18260 Coffea canephora HOM05D005109 ORTHO05D006084 5.3e-58 229.2 384 43.8
MD10G1183500 Malus domestica HOM05D005109 ORTHO05D006084 9.0e-58 228.4 396 46.5
TWI18G0717 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 9.0e-58 228.4 384 44.8
FAN15G3301 Fragaria x ananassa HOM05D005109 ORTHO05D006084 1.5e-57 227.6 389 45.2
FvH4_2g21350 Fragaria vesca HOM05D005109 ORTHO05D006084 2.6e-57 226.9 408 46.3
Sabra02G0030500 Salix brachista HOM05D005109 ORTHO05D006084 2.6e-57 226.9 397 43.6
Nn1g02784 Nelumbo nucifera HOM05D005109 ORTHO05D006084 3.4e-57 226.5 391 45.0
Peaxi162Scf01280g00016 Petunia axillaris HOM05D005109 ORTHO05D006084 1.0e-56 224.9 378 41.3
CANSAT01G1854 Cannabis sativa HOM05D005109 ORTHO05D006084 2.2e-56 223.8 409 42.8
Eucgr.G01947 Eucalyptus grandis HOM05D005109 ORTHO05D006084 3.8e-56 223.0 362 45.0
CAN.G1147.5 Capsicum annuum HOM05D005109 ORTHO05D006084 6.5e-56 222.2 377 42.4
FAN20G2708 Fragaria x ananassa HOM05D005109 ORTHO05D006084 6.5e-56 222.2 387 45.2
Cpa.g.sc50.15 Carica papaya HOM05D005109 ORTHO05D006084 8.5e-56 221.9 397 45.3
Duzib211G0434 Durio zibethinus HOM05D005109 ORTHO05D006084 8.5e-56 221.9 386 45.1
Gohir.A08G190200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 8.5e-56 221.9 395 41.8
Duzib133G1173 Durio zibethinus HOM05D005109 ORTHO05D006084 1.1e-55 221.5 384 44.5
Eucgr.B01549 Eucalyptus grandis HOM05D005109 ORTHO05D006084 1.4e-55 221.1 387 43.7
COL.COLO4_03875 Corchorus olitorius HOM05D005109 ORTHO05D006084 2.5e-55 220.3 391 43.5
Sopen09g028260 Solanum pennellii HOM05D005109 ORTHO05D006084 4.2e-55 219.5 380 40.8
PGSC0003DMG400010318 Solanum tuberosum HOM05D005109 ORTHO05D006084 1.2e-54 218.0 381 40.9
Gohir.D08G208700 Gossypium hirsutum HOM05D005109 ORTHO05D006084 1.6e-54 217.6 385 41.6
Duzib138G0302 Durio zibethinus HOM05D005109 ORTHO05D006084 2.1e-54 217.2 385 44.4
Gorai.004G221100 Gossypium raimondii HOM05D005109 ORTHO05D006084 3.6e-54 216.5 383 41.5
Migut.D00430 Erythranthe guttata HOM05D005109 ORTHO05D006084 4.6e-54 216.1 393 41.0
Gohir.D11G136900 Gossypium hirsutum HOM05D005109 ORTHO05D006084 1.0e-53 214.9 378 42.9
FAN24G2940 Fragaria x ananassa HOM05D005109 ORTHO05D006084 1.8e-53 214.2 408 45.3
Gorai.007G146600 Gossypium raimondii HOM05D005109 ORTHO05D006084 1.8e-53 214.2 378 43.4
Solyc09g025260.4 Solanum lycopersicum HOM05D005109 ORTHO05D006084 1.8e-53 214.2 379 39.8
ClCG07G001090 Citrullus lanatus HOM05D005109 ORTHO05D006084 1.1e-52 211.5 420 41.4
Nitab4.5_0000470g0030 Nicotiana tabacum HOM05D005109 ORTHO05D006084 1.1e-52 211.5 381 41.5
TWI12G1013 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 2.0e-52 210.7 385 42.1
Gohir.A11G131200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 2.2e-51 207.2 379 42.5
Migut.N02209 Erythranthe guttata HOM05D005109 ORTHO05D006084 2.8e-51 206.8 382 40.3
Hma1.2p1_0273F.1_g109610 Hydrangea macrophylla HOM05D005109 ORTHO05D006084 3.7e-51 206.5 378 41.3
Oeu063313.1 Olea europaea HOM05D005109 ORTHO05D006084 4.8e-51 206.1 360 43.3
EL10As5g23493 Beta vulgaris HOM05D005109 ORTHO05D006084 1.2e-49 201.4 395 41.3
Ah.11g049450 Amaranthus hybridus HOM05D005109 ORTHO05D006084 1.5e-49 201.1 407 41.0
MSTRG.17494 Avicennia marina HOM05D005109 ORTHO05D006084 1.5e-49 201.1 389 41.4
Sed0014438 Sechium edule HOM05D005109 ORTHO05D006084 3.4e-49 199.9 421 39.7
PGR031G1666 Punica granatum HOM05D005109 ORTHO05D006084 1.0e-48 198.4 376 42.0
HanXRQChr04g0110521 Helianthus annuus HOM05D005109 ORTHO05D006084 1.7e-48 197.6 371 41.2
Sed0018169 Sechium edule HOM05D005109 ORTHO05D006084 2.2e-48 197.2 402 40.5
PSO832G0134 Papaver somniferum HOM05D005109 ORTHO05D006084 1.1e-47 194.9 370 41.9
Glyma.19G165100 Glycine max HOM05D005109 ORTHO05D006084 1.4e-47 194.5 375 42.1
THA.LOC104826217 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 1.4e-47 194.5 393 44.8
PSO210G5198 Papaver somniferum HOM05D005109 ORTHO05D006084 9.4e-47 191.8 377 43.2
CsaV3_3G022220 Cucumis sativus L. HOM05D005109 ORTHO05D006084 4.7e-46 189.5 424 42.0
SalBow4G0920 Salvia bowleyana HOM05D005109 ORTHO05D006084 4.7e-46 189.5 364 41.2
DCAR_012551 Daucus carota HOM05D005109 ORTHO05D006084 1.4e-45 188.0 334 41.6
TAR633G2233 Trochodendron aralioides HOM05D005109 ORTHO05D006084 1.4e-45 188.0 365 41.6
AUR62011844 Chenopodium quinoa HOM05D005109 ORTHO05D006084 1.8e-45 187.6 319 43.3
ECA236G0222 Erigeron canadensis HOM05D005109 ORTHO05D006084 1.8e-45 187.6 321 42.7
Sabra05G0173800 Salix brachista HOM05D005109 ORTHO05D006084 5.1e-45 186.0 378 41.8
Aa31LG5G5770 Aethionema arabicum HOM05D005109 ORTHO05D006084 6.7e-45 185.7 395 42.0
MELO3C012881.2 Cucumis melo HOM05D005109 ORTHO05D006084 6.7e-45 185.7 401 39.4
THA.LOC104800869 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 1.1e-44 184.9 385 41.6
Atru.chr5.1705 Acer truncatum HOM05D005109 ORTHO05D006084 3.3e-44 183.3 384 41.1
Aqoxy5G00221 Aquilegia oxysepala HOM05D005109 ORTHO05D006084 4.4e-44 183.0 404 39.1
Sp1g05000 Schrenkiella parvula HOM05D005109 ORTHO05D006084 2.2e-43 180.6 388 39.9
Actinidia09543 Actinidia chinensis HOM05D005109 ORTHO05D006084 4.8e-43 179.5 317 41.6
AT1G06190 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 1.8e-42 177.6 419 38.7
AL163U10030 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 3.1e-42 176.8 413 39.0
Carub.0001s0555 Capsella rubella HOM05D005109 ORTHO05D006084 4.1e-42 176.4 423 39.0
ATR0736G115 Amborella trichopoda HOM05D005109 ORTHO05D006084 5.3e-42 176.0 336 43.2
C03p20590 Brassica napus HOM05D005109 ORTHO05D006084 3.5e-41 173.3 395 41.0
CARHR005720 Cardamine hirsuta HOM05D005109 ORTHO05D006084 3.5e-41 173.3 421 40.1
BcaC01g05971 Brassica carinata HOM05D005109 ORTHO05D006084 4.5e-41 172.9 397 40.8
BolC3t14465H Brassica oleracea HOM05D005109 ORTHO05D006084 4.5e-41 172.9 397 40.8
BcaB02g06816 Brassica carinata HOM05D005109 ORTHO05D006084 2.9e-40 170.2 406 39.2
Potri.005G225200 Populus trichocarpa HOM05D005109 ORTHO05D006084 2.9e-40 170.2 392 39.3
BcaC01g05975 Brassica carinata HOM05D005109 ORTHO05D006084 3.8e-40 169.9 392 40.6
C03p20550 Brassica napus HOM05D005109 ORTHO05D006084 3.8e-40 169.9 392 40.6
BolC3t14435H Brassica oleracea HOM05D005109 ORTHO05D006084 3.8e-40 169.9 392 40.6
Sp4g13630 Schrenkiella parvula HOM05D005109 ORTHO05D006084 6.5e-40 169.1 405 40.5
A10p04820 Brassica napus HOM05D005109 ORTHO05D006084 2.5e-39 167.2 417 38.4
CARHR124750 Cardamine hirsuta HOM05D005109 ORTHO05D006084 9.4e-39 165.2 362 41.7
BraA10t42751Z Brassica rapa HOM05D005109 ORTHO05D006084 1.2e-38 164.9 401 38.7
Sc17g0000590 Simmondsia chinensis HOM05D005109 ORTHO05D006084 1.2e-38 164.9 442 33.9
Nitab4.5_0005001g0040 Nicotiana tabacum HOM05D005109 ORTHO05D006084 8.0e-38 162.2 327 38.2
A03p17410 Brassica napus HOM05D005109 ORTHO05D006084 8.8e-37 158.7 394 39.3
BraA03t11013Z Brassica rapa HOM05D005109 ORTHO05D006084 8.8e-37 158.7 394 39.3
DCAR_018491 Daucus carota HOM05D005109 ORTHO05D006084 2.0e-36 157.5 364 36.0
Zm00001eb258380 Zea mays HOM05D005109 ORTHO05D006084 2.0e-36 157.5 358 37.7
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 3.3e-36 156.8 394 36.0
unitig_8.g3734 Utricularia gibba HOM05D005109 ORTHO05D006084 1.7e-35 154.5 380 35.0
Thhalv10016746m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 2.8e-35 153.7 412 37.9
BcaC05g24297 Brassica carinata HOM05D005109 ORTHO05D006084 6.3e-35 152.5 392 37.0
C05p04510 Brassica napus HOM05D005109 ORTHO05D006084 6.3e-35 152.5 392 37.0
BolC5t29222H Brassica oleracea HOM05D005109 ORTHO05D006084 1.1e-34 151.8 405 38.0
BcaB01g04060 Brassica carinata HOM05D005109 ORTHO05D006084 3.1e-34 150.2 406 40.4
Aa31LG1G7210 Aethionema arabicum HOM05D005109 ORTHO05D006084 9.1e-34 148.7 400 36.8
vmacro02668 Vaccinium macrocarpon HOM05D005109 ORTHO05D006084 5.9e-33 146.0 340 37.6
Os03g0183100 Oryza sativa ssp. japonica HOM05D005109 ORTHO05D006084 7.7e-33 145.6 361 36.6
Rhsim13G0035600 Rhododendron simsii HOM05D005109 ORTHO05D006084 2.9e-32 143.7 405 32.1
SGA_v2.0_scaffold138G35226 Striga asiatica HOM05D003989 ORTHO05D004626 7.2e-31 139.0 376 35.9
AL4G26340 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 4.7e-30 136.3 401 35.9
Thhalv10007829m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 4.7e-30 136.3 393 35.1
Actinidia07301 Actinidia chinensis HOM05D005109 ORTHO05D006084 1.0e-29 135.2 194 47.9
COL.COLO4_04035 Corchorus olitorius HOM05D005109 ORTHO05D006084 5.2e-29 132.9 268 41.4
HPP92_012858 Vanilla planifolia HOM05D005109 ORTHO05D006084 9.7e-28 128.6 314 36.3
Psat2g009520 Pisum sativum HOM05D005109 ORTHO05D006084 4.8e-27 126.3 90 73.3
Dinv33475 Davidia involucrata HOM05D005109 ORTHO05D006084 2.4e-26 124.0 182 49.5
Cc05_g01680 Coffea canephora HOM05D005109 ORTHO05D006084 3.1e-26 123.6 142 55.6
Actinidia30161 Actinidia chinensis HOM05D005109 ORTHO05D006084 3.2e-23 113.6 239 38.9
AL1G16170 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 2.3e-21 107.5 423 31.4
AT2G31150 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 1.7e-16 91.3 198 42.4
Hund00596 Selenicereus undatus HOM05D005109 ORTHO05D006084 1.2e-14 85.1 206 39.8
Lj1C67T4 Lonicera japonica HOM05D005109 ORTHO05D006084 5.2e-13 79.7 304 31.2
CDE02G3939 Ceratophyllum demersum HOM05D005109 ORTHO05D006084 8.9e-13 79.0 324 29.0
Rhsim01G0262800 Rhododendron simsii HOM05D005109 ORTHO05D006084 2.3e-08 64.3 554 24.4


User provided reference genes

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