Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 9.3e-69 263.8 180 100.0
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.3e-67 260.0 180 98.9
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 3.3e-66 255.4 178 98.3
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 5.0e-54 214.9 181 82.3
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 6.5e-54 214.5 183 86.9
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 8.5e-54 214.2 180 82.2
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 1.6e-52 209.9 183 85.8
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.7e-52 209.1 183 85.8
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 2.6e-50 202.6 183 79.2
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 5.7e-50 201.4 181 71.3
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 5.9e-47 191.4 183 62.3
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 3.8e-46 188.7 183 61.2
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 1.2e-44 183.7 183 59.0
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.1e-44 183.0 188 76.6
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 1.8e-43 179.9 186 57.5
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 2.3e-43 179.5 182 61.0
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 6.7e-43 177.9 183 71.0
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 8.8e-43 177.6 181 65.7
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 2.0e-42 176.4 186 78.5
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 2.0e-42 176.4 185 78.4
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-42 176.4 186 71.0
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-42 176.4 186 71.0
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 2.6e-42 176.0 182 78.6
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.6e-42 176.0 183 77.6
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 2.6e-42 176.0 181 64.6
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 4.4e-42 175.3 185 56.8
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 7.5e-42 174.5 183 65.6
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.7e-42 174.1 183 68.9
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 2.8e-41 172.6 185 67.0
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 3.7e-41 172.2 188 55.3
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 4.8e-41 171.8 182 56.0
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.1e-40 170.6 173 71.1
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 1.4e-40 170.2 182 70.3
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 1.4e-40 170.2 180 68.3
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 2.4e-40 169.5 183 77.6
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 4.1e-40 168.7 190 70.5
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 4.1e-40 168.7 173 59.0
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 7.0e-40 167.9 184 58.2
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 1.2e-39 167.2 182 64.3
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 2.0e-39 166.4 187 55.1
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 3.5e-39 165.6 188 55.3
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 4.5e-39 165.2 183 77.0
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 7.7e-39 164.5 184 58.2
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 1.3e-38 163.7 184 65.8
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-38 163.7 166 71.7
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-38 163.7 166 71.7
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-38 163.7 166 71.7
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 1.7e-38 163.3 184 58.2
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 1.7e-38 163.3 191 67.5
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.9e-38 162.5 166 71.1
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 2.9e-38 162.5 186 62.9
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 3.8e-38 162.2 187 55.1
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 5.0e-38 161.8 183 55.7
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 6.5e-38 161.4 180 58.3
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 6.5e-38 161.4 188 62.2
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 8.5e-38 161.0 185 61.1
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 1.1e-37 160.6 184 61.4
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.1e-37 160.6 182 76.4
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 4.2e-37 158.7 180 55.0
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 4.2e-37 158.7 183 65.0
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 4.2e-37 158.7 192 52.6
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 5.5e-37 158.3 188 62.8
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 5.5e-37 158.3 182 55.5
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 5.5e-37 158.3 183 59.6
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 7.2e-37 157.9 183 59.6
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 9.4e-37 157.5 186 60.2
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 9.4e-37 157.5 189 54.5
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 1.2e-36 157.1 188 62.2
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 2.1e-36 156.4 183 62.3
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 2.1e-36 156.4 183 59.0
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 2.1e-36 156.4 183 62.3
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 2.1e-36 156.4 183 62.3
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 2.1e-36 156.4 182 54.4
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.1e-36 156.4 191 51.3
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 2.1e-36 156.4 186 64.0
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 2.7e-36 156.0 186 62.4
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.7e-36 156.0 191 61.8
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 3.6e-36 155.6 186 62.9
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 3.6e-36 155.6 181 60.2
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 6.1e-36 154.8 186 59.7
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 6.1e-36 154.8 191 50.3
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 8.0e-36 154.5 182 53.3
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 8.0e-36 154.5 191 61.3
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 1.8e-35 153.3 178 73.6
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 1.8e-35 153.3 179 53.6
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 3.0e-35 152.5 182 59.3
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 3.0e-35 152.5 182 73.1
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 3.0e-35 152.5 182 59.3
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 3.0e-35 152.5 182 59.3
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 4.0e-35 152.1 179 53.6
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 6.8e-35 151.4 188 62.8
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 8.8e-35 151.0 193 62.7
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 8.8e-35 151.0 185 53.0
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 8.8e-35 151.0 185 53.0
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 1.2e-34 150.6 182 72.5
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 1.5e-34 150.2 182 58.8
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 2.6e-34 149.4 184 71.7
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 2.6e-34 149.4 185 52.4
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.4e-34 149.1 172 54.1
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 5.7e-34 148.3 187 57.2
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 9.8e-34 147.5 80 97.5
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 1.3e-33 147.1 188 62.2
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.3e-33 147.1 187 51.9
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.2e-33 146.4 173 50.9
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 2.8e-33 146.0 187 56.1
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 2.8e-33 146.0 192 55.7
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.4e-32 143.7 189 57.7
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 4.1e-32 142.1 183 54.1
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 5.4e-32 141.7 187 50.3
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 1.2e-31 140.6 188 55.3
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 2.0e-31 139.8 181 50.3
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 3.5e-31 139.0 183 51.9
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 3.5e-31 139.0 187 49.7
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.0e-30 137.5 189 52.9
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.0e-30 137.5 179 63.7
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.3e-30 137.1 188 48.4
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.8e-30 135.6 172 52.3
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 6.5e-30 134.8 189 52.4
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.9e-29 133.3 191 60.2
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 1.9e-29 133.3 191 60.7
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.5e-29 132.9 187 60.4
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 7.2e-29 131.3 185 51.4
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 2.1e-28 129.8 179 59.8
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 1.0e-27 127.5 176 50.0
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 1.0e-27 127.5 180 47.8
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.8e-27 126.7 117 64.1
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.8e-27 126.7 117 64.1
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 3.0e-27 125.9 189 47.6
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 1.2e-26 124.0 117 62.4
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 1.5e-26 123.6 187 47.6
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 1.5e-26 123.6 182 45.6
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 2.0e-26 123.2 178 47.2
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 9.8e-26 120.9 175 58.9
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 2.8e-25 119.4 142 50.7
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 2.8e-25 119.4 187 58.3
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 4.9e-25 118.6 186 57.5
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 4.9e-25 118.6 173 50.3
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.0e-22 108.6 117 70.1
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 6.6e-22 108.2 118 59.3
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 8.6e-22 107.8 120 53.3
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 1.0e-19 100.9 181 54.1
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 1.4e-19 100.5 189 52.9
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 1.8e-19 100.1 185 41.6
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.5e-18 97.1 193 40.4
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 3.4e-18 95.9 125 53.6
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 9.8e-18 94.4 75 70.7
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 1.7e-17 93.6 160 44.4
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 7.0e-16 88.2 178 36.5
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 2.0e-15 86.7 109 54.1
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.7e-15 86.3 117 52.1
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.7e-15 86.3 120 60.8
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 8.6e-14 81.3 171 32.2
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.5e-13 80.5 91 58.2
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 4.3e-13 79.0 162 36.4
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 5.6e-13 78.6 175 36.0
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 4.0e-11 72.4 75 57.3
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 2.6e-10 69.7 211 29.9
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 3.2e-08 62.8 148 33.1
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 1.0e-06 57.8 175 33.7
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 1.3e-06 57.4 61 65.6
DCAR_013591 Daucus carota HOM05D003921 ORTHO05D004394 5.0e-06 55.5 103 37.9


User provided reference genes

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