Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 4.2e-161 571.2 279 100.0
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.8e-131 470.7 265 87.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 8.6e-130 467.2 264 88.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 5.2e-127 458.0 261 87.0
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 8.9e-127 457.2 281 82.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 5.1e-122 441.4 269 81.0
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 5.1e-122 441.4 251 85.3
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 2.1e-120 436.0 268 80.2
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.9e-116 422.9 252 83.3
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 9.3e-116 420.6 262 78.2
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.3e-114 416.0 259 79.2
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.1e-113 413.7 253 79.4
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.5e-113 413.3 256 79.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.1e-108 397.1 262 74.4
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.1e-108 397.1 258 74.0
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.2e-108 395.6 250 77.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 7.1e-108 394.4 252 77.4
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 9.3e-108 394.0 262 74.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 7.9e-107 391.0 260 74.2
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.3e-106 390.2 263 73.8
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.3e-106 390.2 259 74.9
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.0e-106 389.0 262 73.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 8.7e-106 387.5 254 74.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.1e-105 387.1 248 78.2
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.1e-105 387.1 252 77.4
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.9e-105 386.3 262 73.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.9e-105 386.3 252 75.4
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 2.5e-105 386.0 259 75.7
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.3e-104 383.6 252 76.6
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.6e-104 383.3 246 76.4
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 2.8e-104 382.5 260 73.8
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 3.6e-104 382.1 242 77.7
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 4.8e-104 381.7 249 76.7
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 6.2e-104 381.3 253 73.5
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.2e-104 381.3 252 73.8
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 8.1e-104 380.9 255 74.9
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.1e-104 380.9 255 74.9
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.1e-104 380.9 261 73.2
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 4.0e-103 378.6 254 73.6
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.3e-103 378.3 279 68.8
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 5.3e-103 378.3 254 74.0
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 9.0e-103 377.5 252 72.6
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.0e-102 376.3 223 83.0
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.0e-102 376.3 233 79.4
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.6e-102 375.9 234 76.9
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 7.6e-102 374.4 275 70.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 7.6e-102 374.4 252 72.6
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.2e-101 372.9 260 72.7
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 3.8e-101 372.1 255 72.9
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.8e-101 372.1 244 76.2
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.8e-101 372.1 267 71.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.9e-101 371.7 235 77.4
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 4.9e-101 371.7 259 70.3
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.4e-101 371.3 254 74.0
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.4e-101 370.9 254 74.0
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.1e-100 370.5 254 72.8
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.4e-100 370.2 262 71.4
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.9e-100 369.8 251 74.1
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.9e-100 369.8 276 69.9
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 4.2e-100 368.6 278 66.5
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 5.5e-100 368.2 248 73.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 9.3e-100 367.5 245 74.7
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.6e-99 366.7 256 68.4
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.1e-99 366.3 258 71.7
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 3.5e-99 365.5 248 72.6
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.6e-99 365.2 251 72.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 6.0e-99 364.8 251 72.5
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 7.9e-99 364.4 259 69.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.3e-98 363.6 242 74.8
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.8e-98 363.2 264 68.9
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.8e-98 363.2 252 71.4
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 2.3e-98 362.8 228 77.2
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.0e-98 362.5 270 67.8
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-97 360.1 250 72.0
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.5e-97 359.4 251 70.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 7.4e-97 357.8 249 72.3
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.3e-96 357.1 250 70.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 2.8e-96 355.9 235 73.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 4.8e-96 355.1 240 70.8
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 4.0e-95 352.1 256 68.8
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 4.0e-95 352.1 256 68.8
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.0e-93 347.4 210 79.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.2e-93 346.3 230 69.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 4.9e-93 345.1 238 72.7
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-92 344.0 267 64.4
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.9e-92 343.2 242 68.6
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.2e-92 342.4 268 63.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 5.5e-92 341.7 322 57.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.6e-91 340.1 247 68.0
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 3.5e-91 339.0 209 78.5
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.0e-90 337.4 211 76.3
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.3e-90 337.0 334 55.7
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 6.7e-90 334.7 216 74.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 8.7e-90 334.3 247 66.0
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 2.5e-89 332.8 347 54.5
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 7.4e-89 331.3 209 76.6
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 7.4e-89 331.3 209 77.0
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 8.2e-88 327.8 209 77.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 2.4e-87 326.2 210 76.7
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.1e-84 317.4 198 76.3
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.4e-84 317.0 200 80.0
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.6e-75 287.0 198 68.2
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.4e-71 273.1 225 61.3
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.6e-70 269.6 175 76.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 1.3e-69 267.3 230 55.2
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 6.7e-66 255.0 166 78.9
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 3.7e-64 249.2 235 52.8
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.6e-62 243.0 239 53.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.2e-59 234.2 155 71.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.2e-56 223.4 251 48.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.2e-49 201.1 135 70.4
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.2e-49 201.1 134 75.4
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 4.1e-47 192.6 144 69.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.0e-46 190.3 144 68.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 2.0e-46 190.3 143 69.2
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 7.2e-44 181.8 177 57.6
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.8e-43 179.9 119 68.9
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 4.7e-43 179.1 96 91.7
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 8.8e-42 174.9 115 77.4
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 3.8e-37 159.5 121 67.8
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-30 137.5 79 82.3
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 5.9e-30 135.6 95 68.4
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.3e-26 123.6 82 67.1
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.1e-23 112.8 117 55.6
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 1.5e-20 104.4 47 97.9
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 5.6e-12 75.9 112 45.5
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.2e-11 74.7 168 29.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 4.7e-11 72.8 112 44.6
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 7.8e-06 55.5 40 67.5


User provided reference genes

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