Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 3.0e-196 688.3 354 100.0
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 4.8e-186 654.4 356 94.7
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 6.5e-183 644.0 356 93.5
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 8.8e-180 633.6 356 91.9
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 2.8e-178 628.6 356 91.9
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 7.0e-169 597.4 357 87.7
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 2.7e-168 595.5 357 87.7
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 1.0e-167 593.6 357 86.8
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 2.3e-167 592.4 357 87.4
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 6.8e-164 580.9 371 83.8
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 7.8e-160 567.4 358 84.6
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 9.5e-158 560.5 369 81.8
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.4e-156 556.6 340 85.9
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.5e-150 536.6 308 89.6
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 5.4e-145 518.1 355 76.3
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 4.6e-144 515.0 356 79.5
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 9.5e-142 507.3 364 73.9
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 1.1e-140 503.8 354 75.7
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.1e-140 503.8 359 74.9
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.1e-140 502.3 355 74.6
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 8.9e-140 500.7 363 73.6
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.0e-139 499.6 356 73.9
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 4.4e-139 498.4 362 72.7
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.3e-138 496.9 348 74.1
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 8.4e-138 494.2 353 73.9
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 8.4e-138 494.2 320 78.4
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 8.4e-138 494.2 362 72.9
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.4e-137 493.4 354 74.9
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.4e-137 493.4 347 74.6
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 2.4e-137 492.7 361 73.1
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 3.2e-137 492.3 354 72.3
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.2e-136 490.3 354 74.9
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 3.5e-136 488.8 298 84.6
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 4.6e-136 488.4 348 74.1
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 6.0e-136 488.0 359 73.8
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 7.8e-136 487.6 304 82.2
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 6.6e-135 484.6 301 83.1
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.1e-134 483.8 354 72.3
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.5e-134 483.4 301 80.7
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 3.3e-134 482.3 354 72.3
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 7.3e-134 481.1 355 73.0
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 9.6e-134 480.7 354 72.0
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.7e-133 478.4 297 82.8
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 4.7e-133 478.4 302 82.8
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.4e-132 476.9 354 72.6
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.4e-132 476.9 300 83.3
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.4e-132 476.1 354 71.5
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.0e-132 475.3 351 72.6
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 5.2e-132 474.9 336 74.7
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 3.4e-131 472.2 298 81.2
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 1.1e-129 467.2 356 71.3
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 1.4e-129 466.8 345 70.7
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 3.2e-129 465.7 354 71.2
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 4.6e-128 461.8 347 69.7
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 6.0e-128 461.5 301 81.7
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 1.0e-127 460.7 348 69.0
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 5.1e-127 458.4 351 69.2
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 5.1e-127 458.4 350 68.6
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.5e-126 456.8 348 68.4
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.5e-126 456.1 337 69.1
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 3.3e-126 455.7 348 68.7
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 3.3e-126 455.7 300 76.0
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 7.3e-126 454.5 358 69.6
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 7.3e-126 454.5 292 80.8
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.6e-126 454.1 309 75.7
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.3e-125 453.8 354 69.5
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 2.1e-125 453.0 301 77.1
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 2.1e-125 453.0 300 78.3
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 4.8e-125 451.8 312 73.4
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.4e-124 450.3 352 67.6
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 1.8e-124 449.9 302 75.2
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 1.8e-124 449.9 302 75.2
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 3.1e-124 449.1 312 73.4
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 3.1e-124 449.1 360 66.7
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 4.0e-124 448.7 302 74.8
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 9.0e-124 447.6 357 66.9
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 4.5e-123 445.3 302 75.2
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 9.9e-123 444.1 356 67.1
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.7e-122 443.4 353 68.0
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 6.4e-122 441.4 292 79.5
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.9e-121 439.9 359 67.1
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 2.4e-121 439.5 366 67.8
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 9.3e-121 437.6 340 69.4
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.1e-120 436.4 354 69.2
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 3.5e-120 435.6 304 75.3
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 1.0e-119 434.1 261 85.1
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 3.0e-119 432.6 326 71.2
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 5.1e-119 431.8 308 74.4
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 8.7e-119 431.0 358 65.6
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 7.4e-118 427.9 361 64.0
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 4.8e-117 425.2 356 65.7
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 6.2e-117 424.9 353 65.7
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 6.9e-116 421.4 242 91.7
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 2.6e-115 419.5 290 74.8
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 7.6e-115 417.9 317 70.0
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 4.9e-114 415.2 301 71.4
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.9e-113 413.3 352 64.8
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 9.3e-113 411.0 297 74.1
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 2.7e-112 409.5 297 73.7
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 1.8e-111 406.8 298 72.5
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 8.7e-111 404.4 351 64.1
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.5e-110 403.7 352 63.4
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 1.9e-110 403.3 352 63.4
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 2.5e-110 402.9 351 63.2
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 1.6e-109 400.2 352 62.8
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.8e-109 399.4 352 63.1
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.2e-109 397.9 352 62.5
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 5.3e-108 395.2 356 62.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 5.3e-108 395.2 258 77.1
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 7.6e-107 391.3 258 77.9
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.9e-106 389.4 284 71.1
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 8.4e-106 387.9 257 77.4
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 1.4e-105 387.1 352 63.4
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 4.6e-104 382.1 296 67.6
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 6.0e-104 381.7 262 74.0
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 3.9e-103 379.0 258 75.6
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 1.2e-99 367.5 312 63.1
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.5e-98 361.3 353 59.2
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 4.6e-96 355.5 245 75.9
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 2.9e-90 336.3 252 66.7
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 7.4e-86 321.6 256 63.3
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 1.8e-84 317.0 254 68.9
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 3.6e-80 302.8 177 91.0
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 6.3e-77 292.0 275 55.6
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 5.5e-73 278.9 313 54.0
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 4.8e-69 265.8 193 69.9
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.2e-67 261.2 191 75.4
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 3.5e-51 206.5 157 69.4
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 1.5e-46 191.0 124 73.4
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.6e-43 181.0 103 91.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 7.8e-35 152.1 103 76.7
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 7.8e-35 152.1 103 76.7
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 1.8e-31 141.0 79 81.0
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 5.1e-26 122.9 225 40.0
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 2.2e-21 107.5 63 84.1
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 2.4e-20 104.0 192 32.3
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.2e-11 75.1 46 76.1


User provided reference genes

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