Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26811_v3 Cicer arietinum L. HOM05D004715 ORTHO05D005644 9.5e-83 310.1 151 100.0
Ca_12943_v3 Cicer arietinum L. HOM05D004715 ORTHO05D005644 1.3e-50 203.4 114 87.7
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.2e-48 196.8 114 83.3
Psat5g222760 Pisum sativum HOM05D004715 ORTHO05D005644 1.5e-48 196.4 114 81.6
Medtr3g005080 Medicago truncatula HOM05D004715 ORTHO05D005644 1.0e-47 193.7 114 81.6
TPR.G25532 Trifolium pratense HOM05D004715 ORTHO05D005644 4.9e-47 191.4 114 80.7
TPR.G1414 Trifolium pratense HOM05D004715 ORTHO05D005644 8.4e-47 190.7 114 80.7
Medtr1g052500 Medicago truncatula HOM05D004715 ORTHO05D005644 4.2e-46 188.3 114 78.9
QL05p027948 Quercus lobata HOM05D004715 ORTHO05D005644 3.3e-43 178.7 114 71.9
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea HOM05D004715 ORTHO05D005644 5.7e-43 177.9 143 66.4
Phvul.005G004200 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 1.3e-42 176.8 114 74.6
Phvul.005G019100 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 4.8e-42 174.9 114 73.7
Haze_16520 Corylus avellana HOM05D004715 ORTHO05D005644 6.3e-42 174.5 114 71.9
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea HOM05D004715 ORTHO05D005644 1.4e-41 173.3 114 75.4
Cfa001997 Carpinus fangiana HOM05D004715 ORTHO05D005644 4.1e-41 171.8 114 70.2
Lj3g0005798 Lotus japonicus HOM05D004715 ORTHO05D005644 6.9e-41 171.0 114 71.9
CANSAT56G4056 Cannabis sativa HOM05D004715 ORTHO05D005644 3.4e-40 168.7 114 66.7
CiPaw.01G245000 Carya illinoinensis HOM05D004715 ORTHO05D005644 7.6e-40 167.5 114 68.4
Lalb_Chr22g0350991 Lupinus albus HOM05D004715 ORTHO05D005644 1.3e-39 166.8 114 71.1
Glyma.07G105000 Glycine max HOM05D004715 ORTHO05D005644 3.8e-39 165.2 112 71.4
Glyma.04G133700 Glycine max HOM05D004715 ORTHO05D005644 1.1e-38 163.7 112 70.5
TWI12G0849 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 1.9e-38 162.9 114 65.8
TWI18G0840 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 2.5e-38 162.5 114 65.8
ClCG09G002750 Citrullus lanatus HOM05D004715 ORTHO05D005644 4.2e-38 161.8 115 67.8
Sed0013432 Sechium edule HOM05D004715 ORTHO05D005644 5.5e-38 161.4 127 64.6
CsaV3_7G032580 Cucumis sativus L. HOM05D004715 ORTHO05D005644 7.2e-38 161.0 115 67.8
MELO3C023404.2 Cucumis melo HOM05D004715 ORTHO05D005644 9.3e-38 160.6 115 67.8
GSVIVG01017274001 Vitis vinifera HOM05D004715 ORTHO05D005644 1.6e-37 159.8 114 64.0
FAN19G1260 Fragaria x ananassa HOM05D000191 ORTHO05D005644 5.7e-35 151.4 114 58.8
FAN26G3166 Fragaria x ananassa HOM05D004715 ORTHO05D005644 9.7e-35 150.6 114 59.6
FAN28G2078 Fragaria x ananassa HOM05D004715 ORTHO05D005644 9.7e-35 150.6 114 59.6
Prupe.3G081400 Prunus persica HOM05D004715 ORTHO05D005644 2.2e-34 149.4 114 60.5
TAR369G0040 Trochodendron aralioides HOM05D004715 ORTHO05D005644 2.2e-34 149.4 114 58.8
FvH4_1g25440 Fragaria vesca HOM05D004715 ORTHO05D005644 2.8e-34 149.1 114 57.9
RcHm_v2.0_Chr2g0136471 Rosa chinensis HOM05D004715 ORTHO05D005644 3.7e-34 148.7 114 59.6
RcHm_v2.0_Chr2g0123461 Rosa chinensis HOM05D004715 ORTHO05D005644 1.1e-33 147.1 114 58.8
Duzib160G0636 Durio zibethinus HOM05D004715 ORTHO05D005644 2.4e-33 146.0 115 62.6
PGR102G1320 Punica granatum HOM05D004715 ORTHO05D005644 3.1e-33 145.6 114 62.3
Thecc.06G070800 Theobroma cacao HOM05D004715 ORTHO05D005644 4.1e-33 145.2 115 62.6
Gohir.D10G075500 Gossypium hirsutum HOM05D004715 ORTHO05D005644 9.1e-33 144.1 115 62.6
Gorai.011G081500 Gossypium raimondii HOM05D004715 ORTHO05D005644 9.1e-33 144.1 115 62.6
FAN23G0015 Fragaria x ananassa HOM05D004715 ORTHO05D005644 1.2e-32 143.7 114 57.0
PSO339G1448 Papaver somniferum HOM05D004715 ORTHO05D005644 1.2e-32 143.7 114 57.9
PSO384G1744 Papaver somniferum HOM05D004715 ORTHO05D005644 1.2e-32 143.7 114 57.9
TPR.G1424 Trifolium pratense HOM05D004715 ORTHO05D005644 1.5e-32 143.3 110 65.5
Cpa.g.sc10.228 Carica papaya HOM05D004715 ORTHO05D005644 2.0e-32 142.9 115 63.5
HPP92_025406 Vanilla planifolia HOM05D004715 ORTHO05D005644 2.6e-32 142.5 114 56.1
Aqoxy1G00791 Aquilegia oxysepala HOM05D004715 ORTHO05D005644 4.5e-32 141.7 114 53.5
Thhalv10019155m.g Eutrema salsugineum HOM05D004715 ORTHO05D005644 1.3e-31 140.2 115 63.5
Nn7g35903 Nelumbo nucifera HOM05D004715 ORTHO05D005644 1.7e-31 139.8 114 56.1
Carub.0002s2733 Capsella rubella HOM05D004715 ORTHO05D005644 2.9e-31 139.0 115 61.7
Carub.0005s0104 Capsella rubella HOM05D004715 ORTHO05D005644 2.9e-31 139.0 115 61.7
Gohir.A05G125400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 2.9e-31 139.0 115 60.9
Aa31LG4G470 Aethionema arabicum HOM05D004715 ORTHO05D005644 3.8e-31 138.7 115 62.6
Gohir.D05G126400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 3.8e-31 138.7 115 60.9
Gorai.009G130400 Gossypium raimondii HOM05D004715 ORTHO05D005644 3.8e-31 138.7 115 60.9
Manes.11G053500 Manihot esculenta HOM05D004715 ORTHO05D005644 3.8e-31 138.7 121 56.2
AT1G80190 Arabidopsis thaliana HOM05D004715 ORTHO05D005644 5.0e-31 138.3 115 60.9
CARHR074290 Cardamine hirsuta HOM05D004715 ORTHO05D005644 6.5e-31 137.9 115 61.7
Aa31LG1G19480 Aethionema arabicum HOM05D004715 ORTHO05D005644 1.1e-30 137.1 115 61.7
AL2G41320 Arabidopsis lyrata HOM05D004715 ORTHO05D005644 1.4e-30 136.7 115 60.0
Lsat_1_v5_gn_5_132400 Lactuca sativa HOM05D004715 ORTHO05D005644 1.9e-30 136.3 113 60.2
DCAR_025488 Daucus carota HOM05D004715 ORTHO05D005644 2.5e-30 136.0 114 58.8
Hund21699 Selenicereus undatus HOM05D004715 ORTHO05D005644 4.2e-30 135.2 113 55.8
Os05g0453900 Oryza sativa ssp. japonica HOM05D004715 ORTHO05D005644 5.5e-30 134.8 113 54.9
Sp5g35610 Schrenkiella parvula HOM05D004715 ORTHO05D005644 5.5e-30 134.8 115 60.0
Actinidia01764 Actinidia chinensis HOM05D004715 ORTHO05D005644 7.2e-30 134.4 113 57.5
Ciclev10027256m.g Citrus clementina HOM05D004715 ORTHO05D005644 1.2e-29 133.7 117 58.1
Potri.006G142300 Populus trichocarpa HOM05D004715 ORTHO05D005644 1.6e-29 133.3 116 55.2
BcaC03g15994 Brassica carinata HOM05D004715 ORTHO05D005644 2.7e-29 132.5 112 58.0
C02p37490 Brassica napus HOM05D004715 ORTHO05D005644 2.7e-29 132.5 112 58.0
Sc14g0006620 Simmondsia chinensis HOM05D004715 ORTHO05D005644 2.7e-29 132.5 113 56.6
AUR62000794 Chenopodium quinoa HOM05D004715 ORTHO05D005644 3.6e-29 132.1 113 55.8
THA.LOC104812498 Tarenaya hassleriana HOM05D004715 ORTHO05D005644 3.6e-29 132.1 115 58.3
CDE02G3949 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 4.6e-29 131.7 114 52.6
vmacro18968 Vaccinium macrocarpon HOM05D004715 ORTHO05D005644 4.6e-29 131.7 113 58.4
Ciclev10026407m.g Citrus clementina HOM05D004715 ORTHO05D005644 7.9e-29 131.0 117 57.3
CDE09G0533 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 1.0e-28 130.6 114 50.9
BcaB05g25289 Brassica carinata HOM05D004715 ORTHO05D005644 1.4e-28 130.2 115 57.4
AUR62005173 Chenopodium quinoa HOM05D004715 ORTHO05D005644 1.4e-28 130.2 113 54.9
Sabra06G0111400 Salix brachista HOM05D004715 ORTHO05D005644 1.4e-28 130.2 120 55.8
Duzib235G0750 Durio zibethinus HOM05D004715 ORTHO05D005644 2.3e-28 129.4 115 57.4
A02p23740 Brassica napus HOM05D004715 ORTHO05D005644 3.9e-28 128.6 112 57.1
BraA02t07366Z Brassica rapa HOM05D004715 ORTHO05D005644 3.9e-28 128.6 112 57.1
Dinv30576 Davidia involucrata HOM05D004715 ORTHO05D005644 3.9e-28 128.6 113 55.8
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 3.9e-28 128.6 113 54.9
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 3.9e-28 128.6 113 54.9
MD17G1206800 Malus domestica HOM05D004715 ORTHO05D005644 3.9e-28 128.6 114 54.4
BcaB02g07291 Brassica carinata HOM05D004715 ORTHO05D005644 5.1e-28 128.3 116 55.2
SEGI_27675 Sequoiadendron giganteum HOM05D004715 ORTHO05D005644 5.1e-28 128.3 114 50.9
EL10Ac4g09393 Beta vulgaris HOM05D004715 ORTHO05D005644 1.1e-27 127.1 113 53.1
BolC2t09760H Brassica oleracea HOM05D004715 ORTHO05D005644 1.1e-27 127.1 115 56.5
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 3.3e-27 125.6 113 54.0
BcaC08g45296 Brassica carinata HOM05D004715 ORTHO05D005644 7.4e-27 124.4 115 55.7
HanXRQChr15g0463891 Helianthus annuus HOM05D004715 ORTHO05D005644 7.4e-27 124.4 114 56.1
TPR.G13435 Trifolium pratense HOM05D004715 ORTHO05D005644 6.3e-26 121.3 82 68.3
C06p28980 Brassica napus HOM05D004715 ORTHO05D005644 8.2e-26 120.9 116 54.3
Ah.06g189580 Amaranthus hybridus HOM05D004715 ORTHO05D005644 1.4e-25 120.2 113 52.2
BolC6t38064H Brassica oleracea HOM05D004715 ORTHO05D005644 3.1e-25 119.0 116 53.4
CSS0021095 Camellia sinensis var. sinensis HOM05D004715 ORTHO05D005644 1.5e-24 116.7 113 54.0
Gohir.A10G075900 Gossypium hirsutum HOM05D004715 ORTHO05D005644 2.6e-24 115.9 79 67.1
A07p26560 Brassica napus HOM05D004715 ORTHO05D005644 1.7e-23 113.2 115 53.0
SMO347G0348 Selaginella moellendorffii HOM05D004715 ORTHO05D005644 2.2e-23 112.8 114 46.5
FAN14G0801 Fragaria x ananassa HOM05D004715 ORTHO05D005644 3.8e-23 112.1 71 69.0
Rhsim08G0215800 Rhododendron simsii HOM05D004715 ORTHO05D005644 8.5e-23 110.9 145 42.8
MSTRG.11119 Avicennia marina HOM05D004715 ORTHO05D005644 4.2e-22 108.6 143 44.1
Oeu052278.1 Olea europaea HOM05D004715 ORTHO05D005644 7.2e-22 107.8 140 45.0
TAR369G0577 Trochodendron aralioides HOM05D004715 ORTHO05D005644 7.2e-22 107.8 79 58.2
Migut.I00797 Erythranthe guttata HOM05D004715 ORTHO05D005644 1.2e-21 107.1 140 43.6
Lj5A69G39 Lonicera japonica HOM05D004715 ORTHO05D005644 1.6e-21 106.7 146 43.2
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 1.6e-21 106.7 140 43.6
Atru.chr1.3057 Acer truncatum HOM05D004715 ORTHO05D005644 2.1e-21 106.3 101 54.5
SGA_v2.0_scaffold5G02664 Striga asiatica HOM05D004715 ORTHO05D005644 2.7e-21 105.9 140 45.7
Eucgr.F02544 Eucalyptus grandis HOM05D004715 ORTHO05D005644 3.6e-21 105.5 89 55.1
AagrBONN_evm.TU.Sc2ySwM_368.872 Anthoceros agrestis HOM05D004715 ORTHO05D005644 8.8e-20 100.9 119 40.3
Cc04_g04100 Coffea canephora HOM05D004715 ORTHO05D005644 7.4e-19 97.8 128 45.3
ATR0210G050 Amborella trichopoda HOM05D004715 ORTHO05D005644 9.7e-19 97.4 89 48.3
Nitab4.5_0004281g0110 Nicotiana tabacum HOM05D004715 ORTHO05D005644 8.2e-18 94.4 146 39.0
Zm00001eb065860 Zea mays HOM05D004715 ORTHO05D005644 2.0e-16 89.7 103 42.7
Solyc09g008630.3 Solanum lycopersicum HOM05D004715 ORTHO05D005644 1.0e-15 87.4 146 36.3
CAN.G1830.13 Capsicum annuum HOM05D004715 ORTHO05D005644 1.3e-15 87.0 146 34.9
Sopen09g003430 Solanum pennellii HOM05D004715 ORTHO05D005644 2.2e-15 86.3 146 35.6
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 2.2e-15 86.3 66 63.6
PGSC0003DMG403012981 Solanum tuberosum HOM05D004715 ORTHO05D005644 3.8e-15 85.5 146 36.3
unitig_0.g2002 Utricularia gibba HOM05D004715 ORTHO05D005644 8.5e-15 84.3 168 32.7
VMungo0331G0566 Vigna mungo HOM05D004715 ORTHO05D005644 1.9e-14 83.2 79 57.0
Rhsim03G0103800 Rhododendron simsii HOM05D004715 ORTHO05D005644 5.5e-14 81.6 109 39.4
MCO12G383 Micromonas commoda HOM05D004715 ORTHO05D005644 4.7e-13 78.6 116 33.6
Rhsim03G0101400 Rhododendron simsii HOM05D004715 ORTHO05D005644 8.0e-13 77.8 108 38.9
Atru.BG.159.p Acer truncatum HOM05D004715 ORTHO05D005644 1.8e-12 76.6 70 57.1
Pp3c20_16980 Physcomitrium patens HOM05D004715 ORTHO05D005644 2.3e-12 76.3 114 36.0
Pp3c20_17250 Physcomitrium patens HOM05D004715 ORTHO05D005644 2.3e-12 76.3 114 36.0
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 4.0e-12 75.5 112 35.7
FvH4_6g30230 Fragaria vesca HOM05D004715 ORTHO05D005644 1.5e-11 73.6 47 68.1
Medtr7g052330 Medicago truncatula HOM05D004715 ORTHO05D005644 1.5e-11 73.6 100 43.0
SalBow2G3045 Salvia bowleyana HOM05D004715 ORTHO05D005644 6.3e-10 68.2 115 36.5
Cc00_g27240 Coffea canephora HOM05D004715 ORTHO05D005644 4.5e-08 62.0 104 38.5
SHI09667 Sapria himalayana HOM05D000105 ORTHO05D000023 7.7e-08 61.2 60 46.7
Mapoly0008s0246 Marchantia polymorpha HOM05D004715 ORTHO05D005644 1.3e-07 60.5 113 30.1
Oeu063807.1 Olea europaea HOM05D004715 ORTHO05D005644 2.9e-07 59.3 66 47.0
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 1.5e-06 57.0 128 29.7
MSTRG.22727 Avicennia marina HOM05D004715 ORTHO05D005644 9.4e-06 54.3 66 39.4
ECA234G4462 Erigeron canadensis HOM05D004715 ORTHO05D005644 9.4e-06 54.3 64 46.9


User provided reference genes

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