Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 6.2e-70 267.3 133 100.0
Ca_05093_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.1e-56 221.1 131 82.4
Ca_07325_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 9.7e-55 216.9 131 84.0
Ca_11480_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.9e-51 205.3 132 81.8
Ca_19963_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 6.5e-51 204.1 124 83.9
Ca_19616_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-49 199.1 125 80.0
Ca_23063_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.1e-49 197.6 125 80.0
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.4e-48 196.4 117 84.6
Ca_23929_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.2e-46 189.1 109 88.1
Ca_19783_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.4e-42 176.4 110 84.5
Ca_27138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.4e-42 176.4 112 82.1
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.7e-41 172.2 99 88.9
Ca_26647_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 4.7e-41 171.4 100 89.0
Ca_27011_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.7e-39 164.5 104 78.8
Ca_07471_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000016 7.4e-39 164.1 131 67.2
Ca_04650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 9.7e-39 163.7 104 81.7
Ca_26894_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.7e-39 163.7 100 84.0
Ca_27944_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-38 162.9 102 83.3
Ca_23985_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.3e-38 161.0 105 80.0
Ca_06635_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.4e-37 159.8 101 81.2
Ca_26291_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.5e-36 155.2 100 78.0
Ca_09584_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-35 153.7 100 81.0
Ca_14687_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-35 152.9 99 81.8
Ca_11934_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.2e-34 147.5 100 74.0
Ca_19853_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.1e-33 144.4 125 65.6
TPR.G17328 Trifolium pratense HOM05D000014 ORTHO05D000016 1.2e-31 140.2 144 56.2
Ca_23984_v3 Cicer arietinum L. HOM05D001980 ORTHO05D000016 2.0e-31 139.4 131 58.0
TPR.G23039 Trifolium pratense HOM05D000014 ORTHO05D009530 4.4e-31 138.3 145 56.6
Ca_22785_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.8e-30 135.6 73 84.9
Ca_03067_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.3e-30 134.0 131 57.3
Ca_26009_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 4.1e-29 131.7 72 84.7
TPR.G31962 Trifolium pratense HOM05D000014 ORTHO05D000016 6.5e-27 124.4 147 51.0
TPR.G770 Trifolium pratense HOM05D000014 ORTHO05D000016 2.1e-25 119.4 134 56.0
TPR.G24565 Trifolium pratense HOM05D000014 ORTHO05D000016 2.7e-25 119.0 133 55.6
Ca_27251_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.1e-25 117.9 103 63.1
Ca_30733_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.3e-24 115.9 85 68.2
VMungo0720G1022 Vigna mungo HOM05D000014 ORTHO05D000016 3.0e-24 115.5 147 46.9
Ca_26232_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.5e-23 113.2 100 68.0
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.7e-22 108.6 131 50.4
Ca_19559_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.6e-20 103.2 102 59.8
Oeu009438.1 Olea europaea HOM05D008689 ORTHO05D009530 6.6e-19 97.8 132 47.7
Ca_28228_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 1.5e-18 96.7 131 47.3
Oeu041515.1 Olea europaea HOM05D008689 ORTHO05D009530 3.3e-18 95.5 130 46.2
Oeu048386.1 Olea europaea HOM05D008689 ORTHO05D009530 3.3e-18 95.5 130 46.2
TPR.G40343 Trifolium pratense HOM05D008689 ORTHO05D009530 4.2e-18 95.1 99 60.6
Oeu033904.1 Olea europaea HOM05D008689 ORTHO05D009530 1.6e-17 93.2 129 45.0
VMungo0540G0970 Vigna mungo HOM05D001400 ORTHO05D001795 4.7e-17 91.7 126 44.4
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 2.0e-15 86.3 118 42.4
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 2.0e-15 86.3 118 42.4
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 2.0e-15 86.3 118 42.4
Ca_27783_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.5e-15 84.3 103 50.5
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-14 83.6 134 42.5
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-14 83.6 134 42.5
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-14 83.6 134 42.5
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-14 83.6 134 42.5
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 1.7e-14 83.2 134 41.8
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 2.2e-14 82.8 140 38.6
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 1.1e-13 80.5 125 40.0
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-13 80.5 134 41.8
TWI23G0302 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.1e-13 80.5 139 39.6
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.8e-13 79.7 126 41.3
Ca_26651_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.4e-13 79.3 96 50.0
AUR62013962 Chenopodium quinoa HOM05D008689 ORTHO05D009530 3.2e-13 79.0 139 36.7
SGA_v2.0_scaffold279G46771 Striga asiatica HOM05D000014 ORTHO05D000016 5.4e-13 78.2 133 40.6
TWI23G1233 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 9.2e-13 77.4 139 38.1
AUR62031362 Chenopodium quinoa HOM05D008689 ORTHO05D009530 1.2e-12 77.0 140 36.4
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 1.2e-12 77.0 108 42.6
Oeu036301.1 Olea europaea HOM05D008689 ORTHO05D009530 3.5e-12 75.5 132 40.2
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 4.5e-12 75.1 122 39.3
Ah.02g118730 Amaranthus hybridus HOM05D008689 ORTHO05D009530 7.8e-12 74.3 100 45.0
Ca_06731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-11 73.9 47 83.0
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 1.0e-11 73.9 94 43.6
AUR62041646 Chenopodium quinoa HOM05D008689 ORTHO05D009530 1.3e-11 73.6 116 43.1
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 1.7e-11 73.2 136 37.5
AUR62028942 Chenopodium quinoa HOM05D008689 ORTHO05D009530 2.3e-11 72.8 130 35.4
Oeu038457.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-11 72.8 113 44.2
AUR62040118 Chenopodium quinoa HOM05D008689 ORTHO05D009530 2.9e-11 72.4 139 36.0
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 2.9e-11 72.4 117 36.8
TPR.G30974 Trifolium pratense HOM05D000014 ORTHO05D000016 5.0e-11 71.6 76 57.9
SGA_v2.0_scaffold162G37885 Striga asiatica HOM05D000014 ORTHO05D000016 6.6e-11 71.2 133 38.3
AUR62038193 Chenopodium quinoa HOM05D008689 ORTHO05D009530 1.5e-10 70.1 141 36.2
FvH4_3g26316 Fragaria vesca HOM05D000014 ORTHO05D000016 1.5e-10 70.1 117 35.9
Hund08269 Selenicereus undatus HOM05D015217 ORTHO05D018115 1.5e-10 70.1 116 38.8
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 1.9e-10 69.7 125 38.4
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 1.9e-10 69.7 101 40.6
Gohir.D09G044366 Gossypium hirsutum HOM05D000014 ORTHO05D000016 3.3e-10 68.9 130 38.5
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 3.3e-10 68.9 132 37.9
AUR62037558 Chenopodium quinoa HOM05D008689 ORTHO05D009530 7.3e-10 67.8 118 35.6
AUR62024034 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.5e-10 67.4 132 35.6
Ca_11645_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 9.5e-10 67.4 90 47.8
Oeu048209.1 Olea europaea HOM05D008689 ORTHO05D009530 9.5e-10 67.4 125 39.2
Ah.05g176490 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.6e-09 66.6 128 35.9
AUR62037522 Chenopodium quinoa HOM05D008689 ORTHO05D009530 1.6e-09 66.6 120 35.8
AUR62036519 Chenopodium quinoa HOM05D008689 ORTHO05D009530 2.8e-09 65.9 136 36.0
TPR.G29200 Trifolium pratense HOM05D000014 ORTHO05D000016 6.1e-09 64.7 57 52.6
Ca_23501_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.0e-09 64.3 101 43.6
Oeu020307.1 Olea europaea HOM05D000014 ORTHO05D000016 8.0e-09 64.3 77 49.4
FvH4_6g23372 Fragaria vesca HOM05D000014 ORTHO05D000016 1.4e-08 63.5 132 34.1
TWI56G1009 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 3.1e-08 62.4 126 33.3
TWI74G0887 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 3.1e-08 62.4 126 33.3
TWI23G1083 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 5.2e-08 61.6 126 33.3
FvH4_1g29494 Fragaria vesca HOM05D000014 ORTHO05D000093 6.8e-08 61.2 124 32.3
EL10Ac5g11602 Beta vulgaris HOM05D000014 ORTHO05D000016 8.9e-08 60.8 120 36.7
TWI39G0697 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.9e-08 60.8 123 35.8
TWI81G0756 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.9e-08 60.8 123 35.8
arahy.Tifrunner.gnm1.ann1.DU2Q8J Arachis hypogaea HOM05D012201 ORTHO05D000016 1.5e-07 60.1 131 31.3
Ca_19729_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.5e-07 60.1 50 58.0
Oeu062459.1 Olea europaea HOM05D008689 ORTHO05D009530 1.5e-07 60.1 77 48.1
TWI39G0775 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.5e-07 60.1 126 32.5
MD08G1150100 Malus domestica HOM05D000014 ORTHO05D000016 2.0e-07 59.7 86 41.9
TWI81G1095 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.0e-07 59.7 123 35.8
ECA232G1448 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.4e-07 58.9 136 32.4
VMungo0540G1909 Vigna mungo HOM05D009087 ORTHO05D000016 3.4e-07 58.9 68 45.6
EL10Ac6g14688 Beta vulgaris HOM05D000014 ORTHO05D000016 4.4e-07 58.5 120 36.7
ECA236G3420 Erigeron canadensis HOM05D000014 ORTHO05D000093 4.4e-07 58.5 137 32.8
FvH4_1g29771 Fragaria vesca HOM05D000014 ORTHO05D000016 4.4e-07 58.5 125 33.6
MD08G1099400 Malus domestica HOM05D031194 ORTHO05D029699 4.4e-07 58.5 110 37.3
ECA233G0374 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.8e-07 58.2 136 32.4
ECA232G1971 Erigeron canadensis HOM05D000014 ORTHO05D000016 7.5e-07 57.8 141 31.9
ECA246G2918 Erigeron canadensis HOM05D000014 ORTHO05D000093 9.8e-07 57.4 136 32.4
ECA247G1798 Erigeron canadensis HOM05D000014 ORTHO05D000093 9.8e-07 57.4 135 31.1
ECA232G3605 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 136 32.4
ECA238G0158 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 136 32.4
ECA238G1304 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 136 32.4
VMungo0331G1442 Vigna mungo HOM05D009087 ORTHO05D000016 1.3e-06 57.0 66 45.5
Ah.09g227080 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.7e-06 56.6 79 39.2
ECA232G2394 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-06 56.6 106 34.0
FvH4_4g05352 Fragaria vesca HOM05D000014 ORTHO05D000016 1.7e-06 56.6 131 31.3
ECA232G4168 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.2e-06 56.2 135 31.1
ECA238G3745 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.2e-06 56.2 125 32.8
Ah.01g016530 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.7e-06 55.5 77 41.6
CANSAT21G0085 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-06 55.5 112 33.9
ECA048G0001 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA232G2166 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA232G4102 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 132 31.1
ECA232G4103 Erigeron canadensis HOM05D000508 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA233G1610 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA233G2865 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA233G3560 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 136 31.6
ECA234G3340 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 136 32.4
ECA236G1890 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA238G1422 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA240G3545 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA246G0041 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA246G2406 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA247G3828 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA289G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
ECA292G0002 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.7e-06 55.5 135 31.1
Oeu018771.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-06 55.5 75 45.3
CANSAT01G2491 Cannabis sativa HOM05D000014 ORTHO05D000016 4.9e-06 55.1 112 33.9
AUR62031361 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.9e-06 55.1 81 37.0
ECA247G2016 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.4e-06 54.7 136 31.6
CANSAT80G0973 Cannabis sativa HOM05D000014 ORTHO05D000016 8.3e-06 54.3 109 35.8
ECA232G3687 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.3e-06 54.3 136 31.6
ECA234G1330 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.3e-06 54.3 136 31.6
HanXRQChr05g0135921 Helianthus annuus HOM05D000014 ORTHO05D000016 8.3e-06 54.3 108 34.3
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 8.3e-06 54.3 120 34.2


User provided reference genes

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