Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.4e-175 617.8 312 100.0
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 2.5e-154 548.9 310 84.5
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 4.0e-152 541.6 310 83.9
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.2e-148 530.0 310 83.5
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.8e-136 489.6 311 76.5
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 2.2e-134 482.6 310 77.4
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 6.5e-134 481.1 310 77.4
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.1e-133 480.3 310 72.9
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.1e-132 476.1 310 74.2
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.6e-132 474.9 310 71.0
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 2.5e-130 469.2 309 73.5
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 4.3e-130 468.4 309 70.9
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 9.6e-130 467.2 310 69.7
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.2e-127 460.3 310 74.8
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.5e-125 451.4 311 72.3
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 9.3e-125 450.7 309 68.6
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 2.1e-124 449.5 310 70.0
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 7.4e-122 441.0 310 67.4
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 7.4e-122 441.0 310 68.1
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 2.8e-121 439.1 312 66.3
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 3.7e-121 438.7 312 66.3
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.8e-120 436.4 311 72.3
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 3.4e-119 432.2 306 69.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.7e-118 429.9 310 63.9
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 6.5e-118 427.9 310 64.2
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.3e-115 419.5 313 64.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 2.3e-115 419.5 313 64.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.3e-114 415.6 310 63.2
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 5.7e-114 414.8 312 62.8
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.7e-113 412.1 312 65.7
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 6.3e-113 411.4 309 60.5
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.1e-112 410.6 310 61.6
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.0e-111 406.4 306 62.1
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.4e-111 405.6 306 60.8
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 3.4e-111 405.6 306 59.2
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 5.9e-111 404.8 310 60.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 7.7e-111 404.4 310 60.0
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.7e-110 403.3 309 60.2
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.7e-110 403.3 309 59.5
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.2e-110 402.9 311 61.1
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 2.2e-110 402.9 308 59.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 2.9e-110 402.5 310 58.7
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 2.9e-110 402.5 310 61.6
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 3.8e-110 402.1 310 60.0
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 5.0e-110 401.7 309 60.2
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 6.5e-110 401.4 310 58.4
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 6.5e-110 401.4 310 64.2
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.1e-109 400.6 306 64.4
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.4e-109 400.2 311 60.5
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.4e-109 400.2 310 59.7
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.5e-109 399.4 309 60.2
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 4.2e-109 398.7 311 59.2
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.1e-108 396.4 309 59.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 7.9e-108 394.4 306 59.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.8e-107 393.3 306 58.8
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 3.9e-107 392.1 305 60.3
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 2.0e-106 389.8 310 59.4
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 3.3e-106 389.0 312 59.9
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 5.7e-106 388.3 309 57.9
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.2e-105 386.3 310 58.4
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 6.3e-105 384.8 311 59.2
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.4e-104 382.9 310 56.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.4e-104 382.9 310 58.1
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 1.6e-103 380.2 307 58.6
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 3.5e-103 379.0 310 60.0
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 7.7e-103 377.9 304 58.2
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.0e-102 377.5 310 55.5
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.3e-102 377.1 279 61.3
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 2.2e-102 376.3 310 60.6
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 2.9e-102 375.9 310 55.5
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.5e-101 373.6 310 55.5
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 4.2e-101 372.1 306 56.9
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.2e-101 372.1 310 61.6
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 5.5e-101 371.7 310 56.1
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.2e-100 370.5 310 55.2
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.7e-100 369.4 310 55.8
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 4.0e-99 365.5 307 55.4
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.0e-98 363.2 315 55.6
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.6e-98 362.8 310 58.1
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 9.7e-98 360.9 299 59.5
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 2.2e-97 359.8 300 59.3
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.2e-97 359.8 304 55.9
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.2e-97 359.8 323 57.6
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.8e-97 359.4 323 57.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 6.3e-97 358.2 310 54.2
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 6.3e-97 358.2 309 58.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 8.2e-97 357.8 306 56.2
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-96 357.5 310 59.7
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.4e-96 356.3 302 58.3
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.3e-96 355.1 309 57.6
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 9.1e-96 354.4 309 58.6
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.7e-95 352.8 312 59.6
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 5.9e-95 351.7 307 53.7
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 5.9e-95 351.7 309 58.3
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 7.7e-95 351.3 309 54.7
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-94 350.1 313 55.3
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.7e-94 350.1 309 57.9
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.8e-94 349.0 313 55.0
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 3.8e-94 349.0 309 57.3
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 8.5e-94 347.8 304 56.9
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.9e-93 346.7 313 54.6
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.2e-93 345.9 306 58.5
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 5.5e-93 345.1 313 55.0
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 5.5e-93 345.1 309 56.0
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 5.5e-93 345.1 301 54.8
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 4.0e-91 339.0 248 62.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 6.8e-91 338.2 307 55.4
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 8.8e-91 337.8 303 52.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.5e-90 337.0 269 58.7
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.5e-90 337.0 310 54.2
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 4.4e-90 335.5 310 54.8
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.3e-89 334.0 309 53.1
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.4e-88 329.7 305 55.7
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 5.4e-88 328.6 310 55.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.5e-87 325.5 310 53.5
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 3.8e-86 322.4 310 54.2
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 3.8e-86 322.4 310 54.2
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 5.0e-86 322.0 307 54.7
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 6.5e-86 321.6 310 53.5
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 4.2e-85 318.9 310 53.9
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 9.5e-85 317.8 288 53.1
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.6e-84 317.0 310 52.9
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 2.8e-84 316.2 310 51.3
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.4e-83 313.9 304 51.3
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.4e-83 313.9 304 51.6
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-82 310.5 304 51.3
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 7.5e-82 308.1 274 55.1
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 2.8e-81 306.2 215 64.7
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.4e-80 303.1 312 51.9
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 3.1e-80 302.8 312 51.9
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.2e-80 301.2 236 63.1
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 1.0e-78 297.7 307 51.1
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.3e-78 297.4 311 51.8
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.3e-78 297.4 311 51.8
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.5e-77 293.1 291 54.3
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 9.5e-77 291.2 310 50.0
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.4e-72 276.6 238 52.1
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 9.2e-72 274.6 242 53.3
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.7e-70 270.4 311 43.1
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 9.8e-66 254.6 279 50.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 9.2e-64 248.1 288 45.1
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.6e-63 247.3 236 55.5
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.7e-63 246.5 277 48.4
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 4.6e-63 245.7 292 42.1
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 8.6e-62 241.5 304 40.5
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.1e-61 241.1 295 46.8
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.6e-61 238.8 295 46.8
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.1e-59 234.6 196 55.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.7e-57 227.3 191 53.9
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.0e-54 216.5 318 37.1
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.9e-54 216.1 262 46.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.9e-54 216.1 262 46.2
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 6.2e-52 208.8 246 43.9
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 5.2e-51 205.7 267 38.2
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.5e-50 204.1 273 35.5
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.3e-46 190.3 271 36.2
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.5e-45 186.8 270 35.2
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.3e-45 186.4 180 51.7
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.2e-44 182.2 174 52.3
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 4.0e-43 179.5 137 61.3
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.1e-38 162.5 166 45.2
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.1e-35 154.8 118 61.9
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.4e-32 144.4 111 60.4
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.2e-31 141.4 161 44.1
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.3e-30 137.9 130 50.8
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.6e-29 131.7 164 47.0
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.4e-26 123.2 231 37.7
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.9e-24 117.5 82 64.6
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.1e-20 104.0 70 67.1
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 2.8e-20 103.6 82 54.9
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 9.3e-16 88.6 69 56.5
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 1.2e-15 88.2 60 65.0
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.0e-14 85.1 103 39.8
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 1.3e-14 84.7 246 24.0
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 4.1e-11 73.2 173 34.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.2e-08 63.5 101 38.6


User provided reference genes

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