Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 6.2e-130 468.8 233 100.0
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.5e-99 367.1 237 74.3
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 1.1e-97 361.7 194 88.7
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 1.2e-96 358.2 194 85.1
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.2e-93 348.2 219 77.2
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 1.6e-93 347.8 174 93.7
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 7.9e-93 345.5 195 84.1
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 8.7e-92 342.0 192 81.8
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 3.3e-91 340.1 214 73.8
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 7.6e-88 328.9 191 78.5
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 6.2e-82 309.3 191 74.3
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 2.0e-72 277.7 217 64.1
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 6.5e-71 272.7 187 65.2
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.1e-70 271.9 191 64.4
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.5e-70 270.8 221 58.8
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 3.2e-70 270.4 232 55.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 6.1e-69 266.2 221 55.7
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.3e-68 265.0 192 63.5
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 3.0e-68 263.8 192 62.5
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.9e-67 261.2 192 63.5
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 3.3e-67 260.4 188 62.8
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 4.3e-67 260.0 226 54.9
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 4.3e-67 260.0 171 67.8
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.4e-67 259.2 188 62.2
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.8e-66 257.3 171 66.7
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 2.8e-66 257.3 189 61.4
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 3.7e-66 256.9 189 60.8
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 3.7e-66 256.9 194 60.8
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 8.2e-66 255.8 193 63.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 8.2e-66 255.8 187 63.1
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.1e-65 255.4 191 64.9
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-65 255.4 201 60.2
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.1e-65 255.4 189 60.8
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.4e-65 255.0 188 62.8
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.4e-65 255.0 190 62.6
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.8e-65 254.6 192 60.9
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 2.4e-65 254.2 225 52.9
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 2.4e-65 254.2 195 61.5
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 4.1e-65 253.4 190 62.1
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 4.1e-65 253.4 194 60.3
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 5.3e-65 253.1 194 61.3
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 9.1e-65 252.3 199 57.8
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.5e-64 251.5 220 53.6
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.5e-64 251.5 173 65.9
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.5e-64 251.5 194 61.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 1.5e-64 251.5 194 59.8
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 2.6e-64 250.8 171 63.7
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 3.4e-64 250.4 203 56.2
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 4.5e-64 250.0 189 60.8
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 5.9e-64 249.6 204 55.4
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 5.9e-64 249.6 204 55.9
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 5.9e-64 249.6 199 56.8
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 5.9e-64 249.6 192 58.9
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.7e-64 249.2 188 60.6
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.0e-63 248.8 204 55.4
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.3e-63 248.4 229 52.8
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 2.9e-63 247.3 228 51.3
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.4e-62 245.0 195 56.4
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 4.2e-62 243.4 212 53.8
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 3.6e-61 240.4 193 56.5
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 4.6e-61 240.0 185 56.2
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.8e-60 238.0 214 52.3
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 3.0e-60 237.3 183 57.9
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 194 59.3
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 3.9e-60 236.9 216 54.2
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 5.1e-60 236.5 185 54.6
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 1.1e-59 235.3 197 56.3
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 1.1e-59 235.3 159 66.7
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 2.6e-59 234.2 163 62.6
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 9.7e-59 232.3 184 57.1
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.7e-58 231.5 192 53.6
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.2e-58 231.1 176 59.7
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.1e-57 228.8 190 58.9
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 6.9e-57 226.1 200 53.5
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 2.0e-56 224.6 191 53.9
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 7.7e-56 222.6 160 61.9
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.0e-55 222.2 225 49.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.1e-54 218.8 181 53.6
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.9e-54 218.0 167 61.1
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 4.2e-54 216.9 185 55.7
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 9.4e-54 215.7 161 60.9
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 2.7e-53 214.2 239 46.9
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 4.4e-51 206.8 154 60.4
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.7e-50 204.9 153 58.2
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 2.2e-50 204.5 190 51.6
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 1.8e-49 201.4 188 52.1
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 7.7e-48 196.1 144 68.1
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 1.3e-47 195.3 136 64.0
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.5e-40 170.6 196 44.9
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 1.6e-37 161.8 176 45.5
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 1.4e-33 148.7 133 49.6
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 2.5e-30 137.9 131 51.1
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 1.4e-28 132.1 149 45.6
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.7e-26 124.0 92 64.1
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 6.3e-26 123.2 133 44.4
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 2.0e-24 118.2 131 38.9
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.7e-24 117.9 77 68.8
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 3.0e-20 104.4 128 34.4
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 2.0e-19 101.7 123 45.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 3.4e-19 100.9 136 35.3
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.3e-18 99.0 189 32.3
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 7.0e-17 93.2 149 32.9
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 5.6e-14 83.6 94 53.2
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 8.0e-13 79.7 71 52.1
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 1.4e-12 79.0 52 59.6
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.5e-11 75.5 131 36.6
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 2.2e-10 71.6 50 56.0
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 7.0e-09 66.6 107 39.3
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.6e-08 65.5 36 83.3
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.6e-08 65.5 36 83.3
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 2.7e-08 64.7 37 75.7
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 6.0e-08 63.5 45 55.6
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 7.8e-08 63.2 35 88.6
Cfa002018 Carpinus fangiana HOM05D000082 ORTHO05D000038 1.3e-07 62.4 65 52.3
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 1.9e-06 58.5 35 74.3
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 2.5e-06 58.2 103 30.1
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.3e-06 57.8 46 50.0
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 3.3e-06 57.8 36 69.4
Sed0005187 Sechium edule HOM05D000424 ORTHO05D000355 9.5e-06 56.2 115 21.7


User provided reference genes

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