Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25459_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 0.0e+00 1156.0 611 100.0
Ca_25458_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 0.0e+00 1152.5 611 99.7
Medtr8g104380 Medicago truncatula HOM05D003928 ORTHO05D007133 3.5e-285 984.6 612 84.3
TPR.G32710 Trifolium pratense HOM05D003928 ORTHO05D007133 8.4e-279 963.4 612 85.5
Psat7g010840 Pisum sativum HOM05D003928 ORTHO05D007133 2.8e-274 948.3 611 83.3
Lj6g0007940 Lotus japonicus HOM05D003928 ORTHO05D007133 3.4e-248 861.7 623 75.6
VMungo0251G0737 Vigna mungo HOM05D003928 ORTHO05D007133 2.2e-242 842.4 623 73.0
Glyma.05G237400 Glycine max HOM05D003928 ORTHO05D007133 8.5e-239 830.5 627 72.7
Lalb_Chr24g0397881 Lupinus albus HOM05D003928 ORTHO05D007133 1.5e-222 776.5 624 68.9
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 6.5e-215 751.1 623 66.6
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea HOM05D003928 ORTHO05D007133 1.0e-207 727.2 594 69.7
Glyma.08G044600 Glycine max HOM05D003928 ORTHO05D007133 5.0e-207 724.9 621 66.0
Cfa019749 Carpinus fangiana HOM05D003928 ORTHO05D007133 7.5e-187 657.9 628 58.9
CiPaw.16G051800 Carya illinoinensis HOM05D003928 ORTHO05D007133 8.6e-183 644.4 625 58.2
QL10p025782 Quercus lobata HOM05D003928 ORTHO05D007133 2.4e-180 636.3 626 57.7
Haze_18702 Corylus avellana HOM05D003928 ORTHO05D007133 1.5e-179 633.6 626 58.3
Atru.chr9.882 Acer truncatum HOM05D003928 ORTHO05D007133 1.5e-171 607.1 630 55.4
CiPaw.16G088000 Carya illinoinensis HOM05D003928 ORTHO05D007133 1.6e-168 597.0 630 54.1
Ciclev10018705m.g Citrus clementina HOM05D003928 ORTHO05D007133 2.3e-167 593.2 628 54.6
RcHm_v2.0_Chr7g0185741 Rosa chinensis HOM05D003928 ORTHO05D007133 3.3e-166 589.3 626 55.1
Thecc.03G037800 Theobroma cacao HOM05D003928 ORTHO05D007133 4.3e-166 589.0 619 55.1
Prupe.5G223200 Prunus persica HOM05D003928 ORTHO05D007133 1.4e-164 583.9 625 54.6
MD14G1228200 Malus domestica HOM05D003928 ORTHO05D007133 3.1e-164 582.8 626 55.0
Duzib068G1360 Durio zibethinus HOM05D003928 ORTHO05D007133 2.6e-163 579.7 616 54.5
Duzib084G0756 Durio zibethinus HOM05D003928 ORTHO05D007133 1.7e-162 577.0 619 55.3
Potri.015G045600 Populus trichocarpa HOM05D003928 ORTHO05D007133 1.9e-161 573.5 621 52.3
MD06G1218100 Malus domestica HOM05D003928 ORTHO05D007133 4.2e-161 572.4 627 54.5
Cpa.g.sc3.486 Carica papaya HOM05D003928 ORTHO05D007133 9.3e-161 571.2 624 54.0
FAN08G0705 Fragaria x ananassa HOM05D003928 ORTHO05D007133 9.3e-161 571.2 623 52.6
FAN18G3471 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.6e-160 570.5 623 53.0
FvH4_5g11850 Fragaria vesca HOM05D003928 ORTHO05D007133 2.1e-160 570.1 623 52.8
Manes.05G124730 Manihot esculenta HOM05D003928 ORTHO05D007133 7.9e-160 568.2 612 53.6
FAN18G2650 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.8e-159 567.0 623 52.5
TWI15G0374 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 1.8e-159 567.0 635 53.4
FAN13G0494 Fragaria x ananassa HOM05D003928 ORTHO05D007133 3.0e-159 566.2 626 52.9
Duzib205G0965 Durio zibethinus HOM05D003928 ORTHO05D007133 5.1e-159 565.5 619 54.1
Potri.012G055000 Populus trichocarpa HOM05D003928 ORTHO05D007133 5.1e-159 565.5 624 53.5
Sabra12G0038700 Salix brachista HOM05D003928 ORTHO05D007133 6.7e-159 565.1 636 51.4
Sabra15G0040100 Salix brachista HOM05D003928 ORTHO05D007133 1.9e-158 563.5 621 51.0
CSS0042498 Camellia sinensis var. sinensis HOM05D003928 ORTHO05D007133 5.6e-158 562.0 628 52.5
PGR044G0175 Punica granatum HOM05D003928 ORTHO05D007133 4.8e-157 558.9 623 53.1
Rhsim08G0131700 Rhododendron simsii HOM05D003928 ORTHO05D007133 1.8e-156 557.0 631 52.5
COL.COLO4_05244 Corchorus olitorius HOM05D003928 ORTHO05D007133 3.4e-155 552.7 618 55.3
MELO3C002096.2 Cucumis melo HOM05D003928 ORTHO05D007133 4.5e-155 552.4 626 50.5
Lj5A151T51 Lonicera japonica HOM05D003928 ORTHO05D007133 7.6e-155 551.6 619 51.5
TWI81G1044 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 1.7e-154 550.4 637 52.6
CsaV3_1G006710 Cucumis sativus L. HOM05D003928 ORTHO05D007133 3.8e-154 549.3 626 50.2
Actinidia02661 Actinidia chinensis HOM05D003928 ORTHO05D007133 6.4e-154 548.5 632 52.2
TAR629G1872 Trochodendron aralioides HOM05D003928 ORTHO05D007133 1.9e-153 547.0 628 52.9
Dinv15697 Davidia involucrata HOM05D003928 ORTHO05D007133 3.2e-153 546.2 603 53.4
Eucgr.K02232 Eucalyptus grandis HOM05D003928 ORTHO05D007133 1.3e-151 540.8 625 51.0
vmacro17703 Vaccinium macrocarpon HOM05D003928 ORTHO05D007133 3.0e-151 539.7 630 50.5
GSVIVG01008318001 Vitis vinifera HOM05D003928 ORTHO05D007133 3.0e-151 539.7 612 52.6
ClCG00G001070 Citrullus lanatus HOM05D003928 ORTHO05D007133 3.3e-150 536.2 623 49.9
ClCG04G011000 Citrullus lanatus HOM05D003928 ORTHO05D007133 3.3e-150 536.2 623 49.9
Gohir.A12G266900 Gossypium hirsutum HOM05D003928 ORTHO05D007133 6.2e-149 531.9 622 52.3
Gorai.008G287400 Gossypium raimondii HOM05D003928 ORTHO05D007133 1.4e-148 530.8 622 51.4
Gohir.D12G267400 Gossypium hirsutum HOM05D003928 ORTHO05D007133 7.6e-147 525.0 622 51.3
Sed0028203 Sechium edule HOM05D003928 ORTHO05D007133 6.5e-146 521.9 615 51.1
CAN.G1425.25 Capsicum annuum HOM05D003928 ORTHO05D007133 3.2e-145 519.6 624 50.3
Nitab4.5_0003433g0050 Nicotiana tabacum HOM05D003928 ORTHO05D007133 1.6e-144 517.3 625 49.0
Cc04_g07000 Coffea canephora HOM05D003928 ORTHO05D007133 3.5e-144 516.2 623 48.6
Nitab4.5_0008233g0010 Nicotiana tabacum HOM05D003928 ORTHO05D007133 3.5e-144 516.2 626 50.0
Peaxi162Scf00683g00003 Petunia axillaris HOM05D003928 ORTHO05D007133 1.3e-143 514.2 630 51.0
CANSAT80G1256 Cannabis sativa HOM05D003928 ORTHO05D007133 5.1e-143 512.3 623 50.4
Sopen03g038150 Solanum pennellii HOM05D003928 ORTHO05D007133 8.7e-143 511.5 626 49.2
Solyc03g119270.1 Solanum lycopersicum HOM05D003928 ORTHO05D007133 1.5e-142 510.8 624 49.7
DCAR_023214 Daucus carota HOM05D003928 ORTHO05D007133 6.3e-141 505.4 621 49.1
Aqoxy3G00241 Aquilegia oxysepala HOM05D003928 ORTHO05D007133 5.5e-137 492.3 631 49.1
Sc04g0003430 Simmondsia chinensis HOM05D003928 ORTHO05D007133 3.0e-135 486.5 620 47.3
Hund10276 Selenicereus undatus HOM05D003928 ORTHO05D007133 1.7e-133 480.7 623 48.3
Nn6g34767 Nelumbo nucifera HOM05D003928 ORTHO05D007133 7.2e-129 465.3 471 55.0
PGSC0003DMG400005647 Solanum tuberosum HOM05D003928 ORTHO05D007133 9.4e-129 464.9 622 47.9
ECA233G2967 Erigeron canadensis HOM05D003928 ORTHO05D007133 3.6e-128 463.0 618 48.7
MBI16_g28239_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 1.7e-125 454.1 624 48.7
PSO017G5964 Papaver somniferum HOM05D003928 ORTHO05D007133 1.7e-125 454.1 625 46.9
PSO478G2973 Papaver somniferum HOM05D003928 ORTHO05D007133 2.8e-125 453.4 622 46.9
HanXRQChr17g0558301 Helianthus annuus HOM05D003928 ORTHO05D007133 1.2e-123 448.0 528 50.0
Ah.15g090400 Amaranthus hybridus HOM05D003928 ORTHO05D007133 1.5e-123 447.6 615 45.7
Lsat_1_v5_gn_8_145181 Lactuca sativa HOM05D003928 ORTHO05D007133 2.0e-123 447.2 606 46.2
AUR62033807 Chenopodium quinoa HOM05D003928 ORTHO05D007133 1.0e-122 444.9 543 48.1
AUR62029899 Chenopodium quinoa HOM05D003928 ORTHO05D007133 3.6e-120 436.4 540 46.9
Migut.I00406 Erythranthe guttata HOM05D003928 ORTHO05D007133 2.6e-118 430.3 505 50.7
EL10Ac4g08652 Beta vulgaris HOM05D003928 ORTHO05D007133 4.8e-117 426.0 624 43.6
SGA_v2.0_scaffold25G10975 Striga asiatica HOM05D003928 ORTHO05D007133 8.2e-117 425.2 616 45.3
THA.LOC104820383 Tarenaya hassleriana HOM05D003928 ORTHO05D007133 2.7e-107 393.7 506 48.6
Aa31LG8G5140 Aethionema arabicum HOM05D003928 ORTHO05D007133 6.1e-104 382.5 521 45.7
AT1G48760 Arabidopsis thaliana HOM05D003928 ORTHO05D007133 2.6e-102 377.1 549 44.6
ATR1125G015 Amborella trichopoda HOM05D003928 ORTHO05D007133 5.7e-102 375.9 616 41.6
Zm00001eb410080 Zea mays HOM05D003928 ORTHO05D007133 9.8e-102 375.2 622 39.7
Carub.0001s3791 Capsella rubella HOM05D003928 ORTHO05D007133 8.3e-101 372.1 509 45.6
AL1G55480 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 1.4e-100 371.3 547 44.1
Sp1g35680 Schrenkiella parvula HOM05D003928 ORTHO05D007133 1.4e-100 371.3 513 45.8
Aa31LG10G4780 Aethionema arabicum HOM05D003928 ORTHO05D007133 4.1e-100 369.8 512 45.5
Sp3g16410 Schrenkiella parvula HOM05D003928 ORTHO05D007133 5.4e-100 369.4 530 43.6
CDE04G1035 Ceratophyllum demersum HOM05D003928 ORTHO05D007133 7.0e-100 369.0 537 43.9
Phvul.002G317900 Phaseolus vulgaris HOM05D003928 ORTHO05D007133 1.2e-99 368.2 241 79.3
SHI26956 Sapria himalayana HOM05D003928 ORTHO05D007133 1.0e-98 365.2 476 45.8
CARHR038730 Cardamine hirsuta HOM05D003928 ORTHO05D007133 3.8e-98 363.2 531 43.5
C05p35390 Brassica napus HOM05D003928 ORTHO05D007133 2.3e-95 354.0 518 43.4
Thhalv10020046m.g Eutrema salsugineum HOM05D003928 ORTHO05D007133 3.0e-95 353.6 520 43.7
Zm00001eb137140 Zea mays HOM05D003928 ORTHO05D007133 4.0e-95 353.2 631 38.4
Os01g0512200 Oryza sativa ssp. japonica HOM05D003928 ORTHO05D007133 5.2e-95 352.8 622 39.2
SEGI_04687 Sequoiadendron giganteum HOM05D003928 ORTHO05D007133 8.9e-95 352.1 574 39.9
HPP92_023134 Vanilla planifolia HOM05D003928 ORTHO05D007133 1.5e-94 351.3 631 39.9
A05p20900 Brassica napus HOM05D003928 ORTHO05D007133 2.6e-94 350.5 502 42.8
BraA05t20995Z Brassica rapa HOM05D003928 ORTHO05D007133 2.6e-94 350.5 502 42.8
BolC5t33475H Brassica oleracea HOM05D003928 ORTHO05D007133 1.4e-92 344.7 514 42.0
A05p31370 Brassica napus HOM05D003928 ORTHO05D007133 3.5e-91 340.1 514 42.0
Actinidia19834 Actinidia chinensis HOM05D003928 ORTHO05D007133 2.3e-90 337.4 472 44.9
C05p47670 Brassica napus HOM05D003928 ORTHO05D007133 2.5e-89 334.0 514 41.4
CARHR093630 Cardamine hirsuta HOM05D003928 ORTHO05D007133 8.9e-87 325.5 542 40.8
BcaC05g27555 Brassica carinata HOM05D003928 ORTHO05D007133 2.0e-86 324.3 497 42.1
BraA05t21975Z Brassica rapa HOM05D003928 ORTHO05D007133 9.8e-86 322.0 500 41.2
AL3G31520 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 7.0e-84 315.8 520 39.6
MBI16_g33214_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 7.0e-84 315.8 355 50.7
CAN.G1129.1 Capsicum annuum HOM05D003928 ORTHO05D007133 6.2e-72 276.2 442 42.3
AagrBONN_evm.TU.Sc2ySwM_368.2497 Anthoceros agrestis HOM05D003928 ORTHO05D007133 2.2e-69 267.7 585 34.0
Mapoly0001s0514 Marchantia polymorpha HOM05D003928 ORTHO05D007133 8.6e-66 255.8 672 33.5
Carub.0003s1806 Capsella rubella HOM05D003928 ORTHO05D007133 9.9e-62 242.3 551 33.6
Ca_28055_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 1.7e-58 231.5 300 55.0
Pp3c5_28670 Physcomitrium patens HOM05D003928 ORTHO05D007133 3.8e-53 213.8 658 31.2
SMO367G0105 Selaginella moellendorffii HOM05D003928 ORTHO05D007133 1.6e-48 198.4 345 34.2
FAN22G1762 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.5e-41 175.3 105 79.0
FAN04G0052 Fragaria x ananassa HOM05D003928 ORTHO05D011217 2.5e-41 174.5 105 80.0
CBR_g44606 Chara braunii HOM05D003928 ORTHO05D007133 1.7e-29 135.2 166 40.4
MBI16_g33212_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D048557 8.4e-29 132.9 229 47.6
FAN22G1848 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.4e-23 115.5 66 81.8
VMungo1127G1783 Vigna mungo HOM05D003928 ORTHO05D007133 1.0e-21 109.4 82 70.7
MCO13G008 Micromonas commoda HOM05D003928 ORTHO05D007133 2.5e-20 104.8 162 31.5
SEGI_11458 Sequoiadendron giganteum HOM05D003928 ORTHO05D048557 5.0e-13 80.5 118 44.9


User provided reference genes

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