Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 1.1e-218 763.1 398 100.0
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 3.7e-211 738.0 398 96.2
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 6.4e-211 737.3 398 96.5
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 1.9e-210 735.7 398 96.0
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 7.0e-210 733.8 398 95.7
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 4.6e-209 731.1 398 95.2
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 3.0e-208 728.4 398 94.7
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 6.6e-208 727.2 398 94.7
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 6.4e-203 710.7 398 92.2
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 6.4e-203 710.7 398 92.7
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 8.3e-203 710.3 398 92.2
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.9e-202 709.1 398 92.0
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.9e-202 709.1 398 92.0
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 1.9e-202 709.1 398 91.7
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 3.2e-202 708.4 398 92.0
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 4.1e-202 708.0 398 92.2
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 5.4e-202 707.6 397 91.7
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 7.1e-202 707.2 398 91.5
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 9.2e-202 706.8 398 91.7
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.6e-201 706.1 398 91.5
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.7e-201 705.3 398 91.5
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 3.5e-201 704.9 398 91.7
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 7.8e-201 703.7 398 91.0
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 3.3e-199 698.4 398 90.2
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 90.5
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 91.7
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 7.3e-199 697.2 398 91.0
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 7.3e-199 697.2 398 90.7
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 3.6e-198 694.9 398 90.2
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 3.6e-198 694.9 398 90.2
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 3.1e-197 691.8 403 89.1
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 4.0e-197 691.4 398 89.2
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.2e-197 691.0 398 89.9
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 5.2e-197 691.0 398 89.4
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 6.8e-197 690.6 398 89.7
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 8.9e-197 690.3 398 89.2
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 1.2e-196 689.9 398 88.7
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 1.5e-196 689.5 398 89.2
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 4.4e-196 688.0 398 89.2
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.7
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.9
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 89.4
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.2
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.2
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 1.3e-195 686.4 398 88.2
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 2.2e-195 685.6 399 89.2
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 2.9e-195 685.3 399 88.7
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.9e-195 685.3 399 88.7
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 2.9e-195 685.3 398 89.4
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.2
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.7
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 6.4e-195 684.1 398 89.2
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 8.4e-195 683.7 398 89.4
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 8.4e-195 683.7 399 88.5
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 8.4e-195 683.7 398 88.4
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.7
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.4
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.2
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.2e-193 679.9 401 88.0
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.7e-193 678.7 399 87.7
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 2.7e-193 678.7 398 87.9
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 1.3e-192 676.4 398 87.2
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.3e-192 676.4 399 87.5
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.3e-192 676.4 398 87.2
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 1.5e-191 672.9 398 86.7
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 7.3e-191 670.6 398 86.7
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.6e-190 669.5 398 86.2
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 5.3e-189 664.5 406 84.7
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 9.9e-188 660.2 398 86.4
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 2.2e-187 659.1 501 72.9
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 1.1e-186 656.8 398 86.7
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 1.1e-186 656.8 400 84.0
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 4.2e-186 654.8 398 85.2
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 5.4e-186 654.4 398 84.2
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 5.4e-186 654.4 398 84.9
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 84.7
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 6.0e-185 651.0 398 84.4
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 6.0e-185 651.0 398 85.4
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.2
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.2
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 3.9e-184 648.3 398 83.9
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 5.1e-184 647.9 437 81.0
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.4
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 83.9
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 83.9
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 83.9
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 3.3e-183 645.2 398 83.9
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 3.3e-183 645.2 398 83.9
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 3.3e-183 645.2 398 83.9
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.2
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 9.6e-183 643.7 398 84.7
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 1.3e-182 643.3 392 84.4
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 83.2
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 83.7
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 1.6e-182 642.9 398 83.7
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.6e-182 642.9 490 72.7
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 2.1e-182 642.5 477 73.2
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 1.1e-181 640.2 440 76.8
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 2.4e-181 639.0 402 82.8
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 4.0e-181 638.3 387 88.9
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 2.6e-180 635.6 418 81.3
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 9.9e-180 633.6 398 83.2
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 2.1e-177 625.9 398 81.2
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 7.9e-177 624.0 398 80.7
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.0e-176 623.6 398 82.2
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 8.7e-176 620.5 354 91.5
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 8.7e-176 620.5 439 77.4
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.1e-175 620.2 368 88.3
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 1.1e-175 620.2 355 89.0
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 8.1e-174 614.0 354 89.3
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 3.8e-171 605.1 398 76.1
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 4.2e-170 601.7 431 76.6
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 6.2e-166 587.8 398 74.9
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 1.5e-164 583.2 398 74.4
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 5.8e-164 581.3 397 73.3
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 5.3e-157 558.1 398 76.9
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 4.8e-150 535.0 398 73.6
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 1.6e-145 520.0 396 67.4
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 8.8e-144 514.2 347 77.5
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 4.5e-140 501.9 423 67.6
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 8.8e-136 487.6 271 92.3
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 8.3e-126 454.5 312 76.9
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 1.7e-110 403.7 394 53.6
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 2.2e-110 403.3 226 91.2
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 1.4e-104 384.0 402 50.5
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 1.3e-102 377.5 216 91.2
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 1.5e-87 327.4 401 46.6
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 1.2e-84 317.8 220 74.5
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 2.1e-81 307.0 223 73.1
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.2e-63 248.1 150 88.0
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 5.8e-63 245.7 150 86.7
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 6.9e-56 222.2 317 41.3
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 2.5e-53 213.8 183 66.7
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 2.3e-51 207.2 146 72.6
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 8.4e-46 188.7 243 53.1
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 8.2e-41 172.2 95 94.7
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 8.2e-41 172.2 95 94.7
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 4.1e-40 169.9 205 43.4
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 7.5e-18 95.9 49 91.8
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 8.2e-17 92.4 65 80.0
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 5.2e-11 73.2 41 90.2
Medtr2g034320 Medicago truncatula HOM05D058003 ORTHO05D259935 6.5e-06 56.2 88 45.5


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