Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1564.3 1039 100.0
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1564.3 1039 100.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 0.0e+00 1408.7 1038 92.6
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 0.0e+00 1379.4 1038 91.2
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1337.4 1044 88.2
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1293.9 1049 86.9
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1228.8 1048 83.2
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1209.9 1038 82.9
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 0.0e+00 1209.9 904 94.1
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 0.0e+00 1203.3 1045 82.2
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 0.0e+00 1203.0 1039 82.4
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1188.3 1042 82.8
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1180.2 1042 82.2
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1177.5 1044 80.7
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1133.2 1042 79.5
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 0.0e+00 1120.1 1041 80.0
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 0.0e+00 1095.5 1050 77.9
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1090.5 1044 77.7
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.0e-309 1065.8 1064 75.3
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 8.6e-308 1060.4 1051 76.6
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 9.5e-307 1057.0 1110 73.9
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.7e-303 1046.2 1115 72.4
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.7e-301 1038.9 1112 72.2
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 6.0e-301 1037.7 1087 73.7
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.9e-299 1032.7 1048 75.3
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 3.6e-298 1028.5 1112 71.8
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.1e-297 1025.4 1053 74.1
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 4.0e-297 1025.0 1104 72.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 4.0e-297 1025.0 1113 71.9
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.4e-296 1021.9 1083 73.4
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 5.8e-296 1021.1 1098 73.0
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 6.4e-295 1017.7 1115 71.2
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 2.4e-294 1015.8 1110 72.0
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.2e-294 1015.4 1115 71.2
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 5.4e-294 1014.6 1132 71.1
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.2e-293 1013.4 1115 71.2
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 4.6e-293 1011.5 1051 73.5
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 7.8e-293 1010.7 1048 74.0
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 3.0e-292 1008.8 1066 73.6
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 8.6e-292 1007.3 1061 73.4
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.1e-290 1002.7 1053 73.5
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 3.6e-290 1001.9 1060 73.4
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 4.7e-290 1001.5 1052 73.6
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 8.1e-290 1000.7 1112 71.0
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.6e-288 995.7 1054 74.1
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.6e-288 995.7 1115 69.6
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.7e-287 993.0 1059 62.0
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 1.4e-286 989.9 1060 73.1
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 4.1e-286 988.4 1053 73.5
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 3.6e-282 975.3 1085 71.3
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.2e-282 974.5 1085 71.2
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 6.2e-282 974.5 1091 69.4
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.5e-280 969.9 1057 72.5
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 4.2e-278 961.8 1048 71.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.7e-276 956.4 1086 71.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 2.5e-275 952.6 1114 69.2
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.5e-275 952.6 1074 71.2
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 5.6e-275 951.4 1041 72.3
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.6e-274 949.9 1046 72.6
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.6e-274 949.9 1042 72.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.8e-273 946.4 1051 72.5
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.4e-273 946.0 1048 71.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.6e-269 933.3 1054 71.2
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 4.6e-269 931.8 1051 70.9
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.7e-268 929.9 1063 65.0
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 2.3e-268 929.5 1053 70.9
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 3.0e-268 929.1 1085 69.1
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.0e-268 929.1 1037 71.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 3.9e-268 928.7 1048 70.4
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 1.6e-266 923.3 1061 67.9
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 3.1e-265 919.1 1092 67.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 6.0e-261 904.8 1214 46.0
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.1e-259 900.6 1070 68.5
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 7.4e-259 897.9 1062 66.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 8.1e-258 894.4 493 87.4
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 2.4e-257 892.9 1070 66.2
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.2e-256 890.6 1070 66.2
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 4.5e-256 888.6 1050 67.3
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 5.8e-256 888.3 1058 63.6
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 3.8e-255 885.6 1143 46.1
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1083 65.7
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1062 69.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.2e-254 882.5 1049 68.3
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 6.7e-252 874.8 1070 65.7
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.5e-251 872.8 1050 69.3
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 7.4e-251 871.3 1040 67.9
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 4.8e-250 868.6 1053 69.8
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.2e-248 864.0 1040 67.7
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 4.8e-242 842.0 487 82.3
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 1.4e-241 840.5 1070 64.8
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 7.7e-240 834.7 1027 66.1
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.8e-233 813.5 494 77.7
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 4.2e-230 802.4 920 73.5
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 2.0e-227 793.5 494 76.3
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 2.5e-222 776.5 985 62.2
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-219 767.7 832 65.3
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 1.6e-216 757.3 1053 59.4
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 3.6e-213 746.1 1046 55.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 9.8e-211 738.0 491 72.3
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 3.1e-201 706.4 1036 61.3
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 2.0e-184 650.6 780 78.1
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 3.4e-179 633.3 484 63.6
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 4.4e-179 632.9 977 57.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 9.8e-179 631.7 926 64.8
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 3.4e-163 580.1 836 69.5
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 5.6e-150 536.2 1028 46.8
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.0e-138 498.8 441 59.2
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 3.0e-135 487.3 1029 46.7
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.7e-130 471.5 253 87.0
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 3.3e-102 377.5 537 39.9
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 3.0e-95 354.4 205 79.0
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 8.8e-95 352.8 705 58.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 2.2e-93 348.2 896 35.3
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.1e-92 344.4 202 80.7
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 3.0e-87 327.8 341 55.7
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 5.4e-84 317.0 347 55.3
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.9e-73 282.0 453 37.3
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 9.2e-68 263.1 193 76.2
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.3e-66 259.2 271 54.6
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 2.3e-66 258.5 174 72.4
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.1e-65 256.1 505 36.2
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.9e-65 255.4 334 50.0
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.4e-60 238.4 301 51.2
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.4e-47 195.3 133 65.4
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 6.9e-47 193.7 194 56.7
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.2e-46 193.0 186 57.5
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 3.8e-45 188.0 99 84.8
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 2.7e-43 181.8 123 78.0
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-39 169.5 130 65.4
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.4e-39 169.5 130 65.4
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.6e-38 165.2 93 87.1
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.3e-34 152.1 114 71.1
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 8.7e-34 150.2 93 77.4
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.4e-31 142.1 74 82.4
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 5.8e-30 137.5 93 72.0
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 2.3e-26 125.6 73 79.5
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 5.1e-26 124.4 105 63.8
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.7e-21 109.4 129 48.1
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 6.9e-15 87.4 123 40.7
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 2.9e-13 82.0 150 35.3
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.9e-11 73.9 42 83.3
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 7.4e-09 67.4 49 55.1
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.7e-08 65.1 40 77.5
arahy.Tifrunner.gnm1.ann1.48QRQ3 Arachis hypogaea HOM05D002189 ORTHO05D002233 1.2e-06 60.1 36 77.8
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.6e-06 58.9 89 44.9


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