Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 0.0e+00 1930.6 968 100.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 0.0e+00 1674.8 968 87.2
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 0.0e+00 1648.6 933 88.4
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 0.0e+00 1527.7 943 82.8
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 0.0e+00 1510.4 970 80.1
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 0.0e+00 1490.7 970 78.8
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 0.0e+00 1486.1 971 78.3
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 0.0e+00 1468.8 971 77.3
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 0.0e+00 1451.0 968 76.5
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 0.0e+00 1437.2 970 77.5
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 0.0e+00 1399.0 958 75.6
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 0.0e+00 1381.3 978 73.6
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 0.0e+00 1381.3 978 73.6
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 0.0e+00 1112.1 976 61.1
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 0.0e+00 1095.1 1006 59.8
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 0.0e+00 1086.2 975 60.2
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 0.0e+00 1082.4 971 59.8
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 3.6e-308 1061.6 982 58.1
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 8.3e-305 1050.4 950 58.2
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.1e-304 1050.0 971 57.6
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 1.7e-302 1042.7 979 57.4
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.1e-301 1040.0 983 57.5
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.5e-301 1038.9 979 57.2
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 1.6e-300 1036.2 978 57.4
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 9.2e-296 1020.4 975 56.9
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.0e-295 1019.2 987 56.6
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 3.6e-292 1008.4 979 56.4
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 1.8e-291 1006.1 962 55.9
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 6.4e-289 997.7 976 56.7
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 1.4e-288 996.5 983 55.6
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 5.4e-288 994.6 973 56.2
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 1.0e-286 990.3 974 56.5
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 1.1e-285 986.9 907 58.5
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.2e-284 983.4 1012 54.2
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 2.8e-284 982.2 986 55.2
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 4.4e-282 974.9 979 55.8
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.1e-280 970.3 956 56.3
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 1.7e-278 963.0 988 53.4
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 5.1e-278 961.4 983 55.3
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 2.1e-276 956.1 966 55.0
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 6.2e-276 954.5 983 54.9
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.4e-275 953.4 937 55.3
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 4.0e-275 951.8 938 56.9
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 5.2e-275 951.4 987 54.9
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.6e-274 949.1 983 54.7
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 1.3e-273 946.8 972 53.1
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 3.7e-273 945.3 988 52.6
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 1.1e-272 943.7 966 54.6
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 2.7e-271 939.1 981 52.8
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 3.5e-271 938.7 986 53.0
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 5.1e-270 934.9 979 52.7
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 1.2e-268 930.2 953 54.4
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 6.2e-268 927.9 980 52.9
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 1.1e-267 927.2 982 53.3
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 5.2e-267 924.9 1071 49.9
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 1.4e-264 916.8 977 52.7
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.2e-263 913.7 979 52.1
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.6e-263 913.3 977 52.6
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 1.3e-262 910.2 976 52.6
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 1.1e-261 907.1 960 51.4
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 5.6e-261 904.8 952 52.1
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 3.6e-260 902.1 983 52.2
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.8e-259 899.8 989 51.7
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 6.9e-259 897.9 919 53.9
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.2e-258 897.1 960 50.6
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 2.2e-257 892.9 983 51.7
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 3.2e-256 889.0 960 50.6
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 9.3e-256 887.5 960 50.5
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.6e-255 886.7 979 51.7
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 2.1e-255 886.3 971 51.6
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.7e-255 885.9 837 57.6
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.7e-254 883.2 978 51.7
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 3.9e-254 882.1 964 50.0
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 3.9e-254 882.1 986 51.6
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 6.6e-254 881.3 964 49.9
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 5.6e-253 878.2 978 51.5
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.4e-251 873.6 954 51.4
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 6.4e-249 864.8 975 49.3
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 2.4e-248 862.8 979 51.4
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 4.2e-248 862.1 971 49.2
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 4.6e-247 858.6 955 50.1
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 1.0e-246 857.4 964 49.5
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.8e-243 846.7 821 55.3
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 5.8e-242 841.6 933 51.6
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 3.2e-240 835.9 687 62.3
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 2.3e-238 829.7 893 51.8
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 1.6e-236 823.5 965 48.4
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 2.8e-236 822.8 983 49.1
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.8e-235 820.1 982 48.9
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 6.9e-235 818.1 959 48.0
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 4.5e-234 815.5 986 47.5
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 7.6e-234 814.7 975 49.2
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 3.2e-232 809.3 660 61.7
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 7.2e-232 808.1 978 47.1
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 7.2e-232 808.1 677 61.0
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 6.1e-231 805.1 995 46.4
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.8e-227 793.5 924 48.2
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 2.2e-220 770.0 662 59.1
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 4.2e-216 755.7 962 45.7
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 7.2e-216 755.0 1009 45.2
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 5.3e-211 738.8 861 48.1
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.6e-210 737.3 618 62.1
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 1.0e-209 734.6 801 51.3
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.3e-204 717.6 978 44.3
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 3.4e-197 693.0 939 43.8
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 9.8e-197 691.4 944 43.1
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 2.2e-196 690.3 952 44.4
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 4.7e-191 672.5 766 48.3
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.4e-187 661.0 461 71.6
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.3e-176 622.9 737 49.0
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.2e-175 621.3 450 68.2
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 3.6e-175 619.8 657 51.1
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 1.6e-170 604.4 780 44.4
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.1e-152 545.0 943 38.2
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 8.9e-150 535.4 619 46.2
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 3.4e-149 533.5 938 38.0
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 3.4e-149 533.5 862 39.9
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 7.6e-149 532.3 482 55.0
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 9.0e-142 508.8 711 43.5
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 2.6e-141 507.3 711 43.9
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 4.5e-133 479.9 750 40.5
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 6.9e-126 456.1 691 40.5
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 3.1e-118 430.6 764 36.0
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 4.2e-115 420.2 521 48.8
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 4.6e-106 390.2 286 67.5
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 7.9e-106 389.4 280 72.5
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 4.2e-99 367.1 541 43.6
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 2.7e-98 364.4 522 41.8
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 3.6e-90 337.4 433 44.8
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.0e-84 319.3 212 72.6
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 2.7e-77 294.7 221 67.9
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 7.2e-75 286.6 236 63.1
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 5.4e-70 270.4 244 60.2
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.5e-69 267.3 177 72.3
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.9e-59 235.3 171 71.9
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 1.2e-58 232.6 240 47.5
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 5.2e-57 227.3 163 69.9
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 7.0e-54 216.9 132 78.0
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 7.3e-51 206.8 277 46.9
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 4.1e-46 191.0 174 54.6
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 6.6e-44 183.7 114 73.7
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 7.1e-38 163.7 312 35.3
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 1.5e-32 146.0 531 26.2
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 1.9e-30 139.0 198 43.9
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 5.4e-30 137.5 80 81.2
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 1.2e-21 109.8 303 35.6
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 1.5e-19 102.8 347 27.7
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 1.6e-18 99.4 552 24.5
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 4.9e-15 87.8 96 44.8
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.4e-14 85.5 43 90.7
Cre16.g683437 Chlamydomonas reinhardtii HOM05D004501 ORTHO05D004944 1.2e-08 66.6 573 22.3
Zm00001eb333660 Zea mays HOM05D000230 ORTHO05D010966 1.5e-08 66.2 47 61.7
Psat4g189680 Pisum sativum HOM05D004501 ORTHO05D004944 1.4e-06 59.7 35 80.0


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