Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 7.7e-225 783.5 397 100.0
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 3.3e-199 698.4 397 88.2
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 2.6e-188 662.1 397 84.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 3.0e-184 648.7 395 84.3
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.8e-179 631.7 397 82.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 2.4e-178 629.0 397 80.4
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.3e-176 623.2 399 80.2
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 9.6e-175 617.1 397 80.1
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-170 603.6 394 77.7
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 7.4e-167 590.9 420 73.3
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 4.5e-164 581.6 375 78.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.3e-160 570.1 347 83.0
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.8e-160 569.7 403 75.4
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 6.9e-149 531.2 402 68.9
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.6e-148 529.3 395 69.4
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 5.9e-148 528.1 410 67.8
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.8e-147 525.4 402 66.9
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 5.0e-147 525.0 402 67.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.9e-146 523.1 402 66.7
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.6e-145 518.8 402 66.7
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.1e-143 513.8 400 68.0
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.7e-142 510.0 403 68.0
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 3.7e-142 508.8 393 69.7
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 2.4e-141 506.1 402 67.9
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 3.1e-141 505.8 400 66.2
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 4.1e-141 505.4 395 68.9
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 4.1e-141 505.4 400 66.2
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.3e-141 505.0 400 66.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 9.1e-141 504.2 399 65.9
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.2e-140 503.8 409 67.0
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 7.7e-140 501.1 409 66.7
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 3.8e-139 498.8 397 65.5
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 5.0e-139 498.4 397 65.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.5e-138 495.0 409 64.8
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 7.2e-138 494.6 403 66.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.7e-137 492.7 408 64.2
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 8.8e-136 487.6 404 62.9
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.6e-135 486.1 393 62.8
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 2.6e-135 486.1 393 63.1
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.6e-135 486.1 394 65.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 5.7e-135 485.0 401 63.3
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 9.7e-135 484.2 402 64.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.3e-134 483.8 406 64.0
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.2e-134 483.0 392 64.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 3.7e-134 482.3 392 64.8
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 6.3e-134 481.5 395 64.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 6.3e-134 481.5 393 62.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 8.2e-134 481.1 391 65.0
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 7.7e-132 474.6 395 64.8
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 7.7e-132 474.6 403 65.3
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.0e-131 474.2 404 62.4
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 2.5e-130 469.5 395 66.1
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.7e-129 466.1 392 63.3
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 6.1e-129 464.9 394 63.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 8.8e-128 461.1 392 62.5
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.5e-127 460.3 397 63.0
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 1.7e-126 456.8 394 61.7
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 2.2e-126 456.4 396 62.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.7e-126 455.7 366 66.4
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 6.3e-126 454.9 423 58.6
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 1.1e-125 454.1 396 64.6
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 3.1e-125 452.6 402 61.7
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 4.1e-125 452.2 396 60.1
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 5.3e-125 451.8 409 62.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 7.0e-125 451.4 374 64.7
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.6e-124 450.3 394 63.2
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.9e-122 443.4 434 58.3
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.6e-121 440.3 403 60.8
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.0e-120 436.0 395 60.5
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.0e-120 436.0 334 69.5
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.5e-119 433.7 397 58.7
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 9.7e-119 431.0 406 58.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.1e-117 427.6 402 58.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.4e-117 427.2 403 59.8
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 5.3e-117 425.2 291 78.4
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.2e-116 424.1 408 58.8
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 2.7e-116 422.9 364 63.2
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 4.5e-116 422.2 389 57.1
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 7.7e-116 421.4 375 59.5
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.3e-115 420.6 407 55.8
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.2e-114 416.0 392 57.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 7.2e-114 414.8 310 71.3
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.0e-112 411.0 457 52.7
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.6e-111 406.4 399 57.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.2e-110 403.3 423 55.3
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 8.3e-110 401.4 266 78.6
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 4.1e-109 399.1 392 55.1
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.3e-104 383.3 340 62.1
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 9.2e-101 371.3 410 54.9
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 2.7e-100 369.8 377 54.4
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.7e-100 369.8 213 87.8
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.3e-99 366.7 351 54.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 4.3e-98 362.5 458 47.6
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.0e-92 343.6 392 46.7
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.3e-91 340.1 418 46.9
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.6e-91 338.2 328 60.1
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.7e-89 332.4 349 55.3
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.2e-89 332.0 335 58.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-88 331.3 337 57.9
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.4e-88 330.9 328 54.3
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-86 324.3 296 62.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-86 322.8 296 62.5
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-86 322.8 296 62.5
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-86 322.8 296 62.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 8.3e-78 295.0 208 72.6
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 3.6e-73 279.6 284 58.1
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.2e-70 270.4 211 67.3
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 4.2e-53 213.0 587 30.2
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.2e-33 145.6 87 75.9
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.0e-30 138.7 176 44.9
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.5e-29 132.9 130 55.4
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.5e-29 132.9 213 39.0
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.2e-21 107.1 120 48.3
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.3e-19 100.9 120 45.8
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-10 71.6 63 61.9
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-10 71.6 63 61.9
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-10 71.6 63 61.9
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 7.5e-10 69.3 57 61.4
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 1.4e-08 65.1 42 71.4
Psat0s2301g0040 Pisum sativum HOM05D006533 ORTHO05D320805 1.4e-08 65.1 55 67.3
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.6e-07 60.8 39 76.9


User provided reference genes

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