Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.1e-270 936.0 484 100.0
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.6e-211 739.6 548 74.3
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 6.4e-205 717.6 493 78.3
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 6.0e-187 657.9 497 73.4
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 5.3e-151 538.5 557 57.8
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 3.0e-146 522.7 510 60.0
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.2e-142 510.8 476 61.8
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 1.4e-138 497.3 495 58.8
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 3.3e-137 492.7 522 56.3
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 1.2e-115 421.0 536 49.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.6e-102 377.5 492 49.2
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.1e-82 310.1 558 40.5
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.2e-81 308.1 634 38.0
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 3.7e-80 303.1 241 68.9
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.1e-79 301.6 575 38.6
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.3e-77 294.7 632 36.6
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.7e-77 294.3 634 36.9
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 5.6e-76 289.3 671 34.1
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.1e-74 285.0 655 34.7
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 2.3e-74 283.9 559 40.3
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 9.9e-73 278.5 651 36.1
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.3e-72 278.1 651 35.9
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.7e-72 277.7 435 41.6
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 2.9e-72 276.9 655 35.4
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.3e-72 275.4 459 40.3
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.9e-71 274.2 601 37.4
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.4e-71 273.9 662 34.6
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 2.4e-71 273.9 664 33.6
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.4e-71 273.9 658 34.7
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 4.1e-71 273.1 668 33.5
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 4.1e-71 273.1 673 34.0
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 7.1e-71 272.3 470 39.4
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.0e-69 268.5 499 38.9
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.7e-69 267.7 579 35.8
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.3e-69 267.3 668 34.7
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 3.0e-69 266.9 450 40.2
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.9e-69 266.5 644 34.8
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.1e-69 266.2 450 40.0
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 8.6e-69 265.4 537 36.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-68 265.0 450 40.0
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.5e-68 264.6 494 39.5
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.9e-68 264.2 444 40.5
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 2.5e-68 263.8 655 34.7
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 3.3e-68 263.5 325 47.1
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 3.3e-68 263.5 603 34.5
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 5.6e-68 262.7 492 37.4
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 9.5e-68 261.9 665 34.7
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.2e-67 261.5 515 36.7
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-67 261.2 419 41.5
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.1e-67 260.8 497 38.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.8e-67 260.4 438 42.0
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 2.8e-67 260.4 659 30.0
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 3.6e-67 260.0 632 34.0
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.1e-67 258.8 410 42.0
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.1e-66 258.5 695 31.1
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.8e-66 257.7 348 46.6
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 2.4e-66 257.3 631 34.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 3.4e-65 253.4 426 42.5
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 4.4e-65 253.1 426 42.5
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 9.9e-65 251.9 500 38.0
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 3.8e-64 250.0 523 35.6
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 3.2e-63 246.9 667 32.8
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 7.1e-63 245.7 443 39.3
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 7.1e-63 245.7 542 36.7
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 7.8e-62 242.3 453 38.6
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 3.9e-61 240.0 616 32.1
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 6.6e-61 239.2 443 38.4
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.3e-60 236.9 427 39.3
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 7.3e-60 235.7 610 32.6
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 9.6e-60 235.3 604 32.3
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 9.6e-60 235.3 626 31.5
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.2e-59 235.0 603 32.5
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 2.8e-59 233.8 411 41.1
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 8.1e-59 232.3 674 31.8
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 4.0e-58 229.9 601 33.8
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.5e-57 228.0 431 38.7
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 2.0e-57 227.6 336 44.3
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 4.4e-57 226.5 636 30.7
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.3e-56 224.9 591 32.7
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.9e-56 223.8 631 30.1
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.9e-55 221.1 219 54.8
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 2.4e-55 220.7 631 30.6
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 4.2e-55 219.9 590 31.0
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 7.1e-55 219.2 481 35.1
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 7.1e-55 219.2 548 34.3
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.7e-53 214.5 646 31.4
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.7e-53 214.5 488 35.7
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.5e-52 211.5 518 32.8
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 9.6e-52 208.8 672 28.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.1e-51 207.6 254 47.6
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 2.8e-51 207.2 576 32.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 2.8e-51 207.2 405 37.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.2e-51 206.1 509 31.8
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 2.4e-50 204.1 596 31.2
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 3.1e-50 203.8 596 31.2
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 4.5e-49 199.9 613 30.8
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.3e-48 198.4 629 30.4
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.3e-48 198.4 629 30.4
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 1.1e-47 195.3 192 54.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 7.4e-44 182.6 633 29.1
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.6e-43 181.4 603 30.8
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 3.5e-38 163.7 122 61.5
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 4.6e-38 163.3 360 35.6
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.0e-38 162.9 167 53.9
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 4.3e-36 156.8 137 56.2
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 1.2e-30 138.7 439 30.8
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 6.7e-29 132.9 344 33.4
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 6.9e-26 122.9 647 26.3
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 5.1e-21 106.7 81 60.5
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 5.1e-21 106.7 483 25.5
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 4.3e-20 103.6 127 42.5
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.2e-14 85.5 498 25.5
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 3.3e-12 77.4 192 35.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.8e-11 74.3 151 39.7
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 4.8e-11 73.6 390 25.9
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.8e-10 71.6 204 32.8
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 7.7e-09 66.2 83 39.8
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 3.8e-08 63.9 170 32.9
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 8.5e-08 62.8 156 32.7
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 9.4e-07 59.3 188 33.5
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 9.4e-07 59.3 163 31.3


User provided reference genes

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