Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23824_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 2.5e-292 1008.1 520 100.0
Ca_23828_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 2.5e-292 1008.1 520 100.0
Medtr8g035750 Medicago truncatula HOM05D000921 ORTHO05D002852 2.7e-233 812.0 519 83.2
TPR.G28298 Trifolium pratense HOM05D000921 ORTHO05D002852 4.0e-229 798.1 519 82.7
Psat4g150320 Pisum sativum HOM05D000921 ORTHO05D002852 1.3e-224 783.1 519 80.9
Lj3g0001885 Lotus japonicus HOM05D000921 ORTHO05D002852 2.1e-222 775.8 519 79.2
Lalb_Chr07g0189601 Lupinus albus HOM05D000921 ORTHO05D002852 2.1e-214 749.2 519 77.1
Glyma.03G021400 Glycine max HOM05D000921 ORTHO05D002852 8.3e-211 737.3 519 75.0
Glyma.18G223300 Glycine max HOM05D000921 ORTHO05D002852 6.0e-209 731.1 519 75.7
LjContig00136g0027596 Lotus japonicus HOM05D000921 ORTHO05D002852 7.8e-209 730.7 521 75.0
Glyma.09G267100 Glycine max HOM05D000921 ORTHO05D002852 2.6e-204 715.7 517 75.0
Phvul.008G074600 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 3.4e-204 715.3 518 74.5
VMungo1383G3256 Vigna mungo HOM05D000921 ORTHO05D002852 3.4e-204 715.3 518 74.7
Ca_07837_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 1.3e-203 713.4 519 73.6
TPR.G37773 Trifolium pratense HOM05D000921 ORTHO05D002852 3.9e-200 701.8 519 72.3
Psat3g104040 Pisum sativum HOM05D000921 ORTHO05D002852 6.6e-200 701.0 519 72.6
Medtr7g075660 Medicago truncatula HOM05D000921 ORTHO05D002852 2.8e-198 695.7 519 72.8
VMungo0331G0475 Vigna mungo HOM05D000921 ORTHO05D002852 2.8e-198 695.7 519 71.7
arahy.Tifrunner.gnm1.ann1.UYJG1L Arachis hypogaea HOM05D000921 ORTHO05D002852 1.1e-197 693.7 521 73.1
arahy.Tifrunner.gnm1.ann1.FN5ZTC Arachis hypogaea HOM05D000921 ORTHO05D002852 3.6e-190 668.7 529 69.8
Lalb_Chr01g0021281 Lupinus albus HOM05D000921 ORTHO05D002852 5.3e-189 664.8 522 69.2
Haze_16736 Corylus avellana HOM05D000921 ORTHO05D002852 2.8e-182 642.5 522 66.9
Dinv43732 Davidia involucrata HOM05D000921 ORTHO05D002852 4.8e-182 641.7 537 65.9
Potri.002G150000 Populus trichocarpa HOM05D000921 ORTHO05D002852 6.2e-182 641.3 521 66.4
Sabra02G0118700 Salix brachista HOM05D000921 ORTHO05D002852 9.0e-181 637.5 525 67.2
QL08p051741 Quercus lobata HOM05D000921 ORTHO05D002852 1.2e-180 637.1 522 64.9
CSS0003914 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D002852 3.4e-180 635.6 524 66.6
Manes.05G043300 Manihot esculenta HOM05D000921 ORTHO05D002852 4.5e-180 635.2 522 65.9
CANSAT56G4522 Cannabis sativa HOM05D000921 ORTHO05D002852 2.9e-179 632.5 523 66.0
Sed0001143 Sechium edule HOM05D000921 ORTHO05D002852 4.9e-179 631.7 523 65.2
Rhsim07G0024100 Rhododendron simsii HOM05D000921 ORTHO05D002852 6.4e-179 631.3 528 65.3
RcHm_v2.0_Chr1g0351141 Rosa chinensis HOM05D000921 ORTHO05D002852 3.2e-178 629.0 525 65.3
Potri.014G072600 Populus trichocarpa HOM05D000921 ORTHO05D002852 4.2e-178 628.6 524 65.1
ClCG05G002030 Citrullus lanatus HOM05D000921 ORTHO05D002852 7.1e-178 627.9 528 65.2
CiPaw.02G165500 Carya illinoinensis HOM05D000921 ORTHO05D002852 1.2e-177 627.1 523 65.6
MELO3C006169.2 Cucumis melo HOM05D000921 ORTHO05D002852 1.2e-177 627.1 523 65.2
Prupe.2G149000 Prunus persica HOM05D000921 ORTHO05D002852 2.7e-177 625.9 524 65.6
Actinidia09569 Actinidia chinensis HOM05D000921 ORTHO05D002852 3.5e-177 625.5 523 65.8
Sabra14G0051800 Salix brachista HOM05D000921 ORTHO05D002852 6.0e-177 624.8 524 64.7
Thecc.01G372900 Theobroma cacao HOM05D000921 ORTHO05D002852 7.9e-177 624.4 524 65.5
CsaV3_3G009490 Cucumis sativus L. HOM05D000921 ORTHO05D002852 8.7e-176 620.9 523 64.2
TWI14G1087 Tripterygium wilfordii HOM05D000921 ORTHO05D002852 1.9e-175 619.8 523 64.1
Sed0009254 Sechium edule HOM05D000921 ORTHO05D002852 9.6e-175 617.5 524 64.9
Atru.chr5.339 Acer truncatum HOM05D000921 ORTHO05D002852 8.1e-174 614.4 522 63.6
FAN03G0226 Fragaria x ananassa HOM05D000921 ORTHO05D002852 8.1e-174 614.4 527 64.7
FAN10G3046 Fragaria x ananassa HOM05D000921 ORTHO05D002852 8.1e-174 614.4 525 64.8
FAN10G3969 Fragaria x ananassa HOM05D000921 ORTHO05D002852 8.1e-174 614.4 525 64.8
Aqoxy7G00539 Aquilegia oxysepala HOM05D000921 ORTHO05D002852 1.4e-173 613.6 519 64.2
TAR629G0908 Trochodendron aralioides HOM05D000921 ORTHO05D002852 6.9e-173 611.3 523 64.4
Gorai.004G041500 Gossypium raimondii HOM05D000921 ORTHO05D002852 9.0e-173 610.9 522 63.2
MD02G1199600 Malus domestica HOM05D000921 ORTHO05D002852 9.0e-173 610.9 524 64.1
TAR629G2419 Trochodendron aralioides HOM05D000921 ORTHO05D002852 9.0e-173 610.9 523 64.2
CAN.G1561.17 Capsicum annuum HOM05D000921 ORTHO05D002852 3.4e-172 609.0 530 63.8
Dinv32396 Davidia involucrata HOM05D000921 ORTHO05D002852 4.5e-172 608.6 525 64.6
Gohir.A11G082900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 5.8e-172 608.2 523 64.4
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.0e-171 607.4 523 63.9
FvH4_7g12350 Fragaria vesca HOM05D000921 ORTHO05D002852 1.7e-171 606.7 527 64.1
Lj9A573G74 Lonicera japonica HOM05D000921 ORTHO05D002852 1.7e-171 606.7 519 65.1
Ciclev10024213m.g Citrus clementina HOM05D000921 ORTHO05D002852 2.9e-171 605.9 523 64.1
Nitab4.5_0002436g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 4.9e-171 605.1 525 63.6
FAN06G4917 Fragaria x ananassa HOM05D000921 ORTHO05D002852 8.4e-171 604.4 527 63.9
Gohir.D11G087000 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.1e-170 604.0 523 64.1
FAN06G2098 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.9e-170 603.2 527 63.8
Gohir.D08G042932 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.2e-170 602.4 522 63.2
Gorai.007G092900 Gossypium raimondii HOM05D000921 ORTHO05D002852 3.2e-170 602.4 523 64.1
Gohir.A08G031900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 4.2e-170 602.1 522 63.4
Nn1g01159 Nelumbo nucifera HOM05D000921 ORTHO05D002852 4.2e-170 602.1 521 63.1
Peaxi162Scf00416g00039 Petunia axillaris HOM05D000921 ORTHO05D002852 7.1e-170 601.3 525 63.2
Cc02_g36420 Coffea canephora HOM05D000921 ORTHO05D002852 1.2e-169 600.5 525 63.6
Solyc01g094050.1 Solanum lycopersicum HOM05D000921 ORTHO05D002852 1.6e-169 600.1 522 64.0
Lj7C526G8 Lonicera japonica HOM05D000921 ORTHO05D002852 4.6e-169 598.6 526 63.3
Sopen01g037870 Solanum pennellii HOM05D000921 ORTHO05D002852 7.9e-169 597.8 522 63.8
Gorai.004G155500 Gossypium raimondii HOM05D000921 ORTHO05D002852 6.7e-168 594.7 524 63.0
Nn6g34350 Nelumbo nucifera HOM05D000921 ORTHO05D002852 6.7e-168 594.7 520 62.1
TAR636G1827 Trochodendron aralioides HOM05D000921 ORTHO05D002852 2.1e-166 589.7 518 62.9
DCAR_025120 Daucus carota HOM05D000921 ORTHO05D002852 3.7e-166 589.0 572 58.9
Gohir.D08G149700 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.1e-165 587.4 526 62.5
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 1.4e-165 587.0 526 62.7
Gohir.A08G128400 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.1e-165 585.9 529 62.0
SGA_v2.0_scaffold303G47875 Striga asiatica HOM05D000921 ORTHO05D002852 6.9e-165 584.7 528 63.1
PSO782G1119 Papaver somniferum HOM05D000921 ORTHO05D002852 1.5e-164 583.6 530 60.4
Sc02g0002400 Simmondsia chinensis HOM05D000921 ORTHO05D002852 1.5e-164 583.6 534 61.0
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 2.0e-164 583.2 529 59.9
PSO478G4503 Papaver somniferum HOM05D000921 ORTHO05D002852 2.6e-164 582.8 530 60.8
AUR62004245 Chenopodium quinoa HOM05D000921 ORTHO05D002852 4.5e-164 582.0 536 60.1
MBI04_g43159_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 5.8e-164 581.6 550 60.5
THA.LOC104801996 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 5.0e-163 578.6 544 58.1
EL10Ac1g00924 Beta vulgaris HOM05D000921 ORTHO05D002852 1.9e-162 576.6 539 58.8
AUR62013603 Chenopodium quinoa HOM05D000921 ORTHO05D002852 2.5e-162 576.2 535 59.4
Eucgr.E01352 Eucalyptus grandis HOM05D000921 ORTHO05D002852 9.3e-162 574.3 522 60.9
Lsat_1_v5_gn_7_7601 Lactuca sativa HOM05D000921 ORTHO05D002852 1.9e-159 566.6 522 61.3
arahy.Tifrunner.gnm1.ann1.4FT79Q Arachis hypogaea HOM05D000921 ORTHO05D002852 2.5e-159 566.2 521 63.0
Carub.0004s2816 Capsella rubella HOM05D000921 ORTHO05D002852 7.4e-159 564.7 538 57.8
AL4G44720 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 8.2e-158 561.2 545 57.1
ECA236G3038 Erigeron canadensis HOM05D000921 ORTHO05D002852 8.2e-158 561.2 519 60.7
AT2G45540 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 4.1e-157 558.9 544 57.2
Aa31LG1G27030 Aethionema arabicum HOM05D000921 ORTHO05D002852 5.3e-157 558.5 537 57.5
COL.COLO4_12586 Corchorus olitorius HOM05D000921 ORTHO05D002852 1.5e-156 557.0 527 60.5
HanXRQChr04g0122231 Helianthus annuus HOM05D000921 ORTHO05D002852 1.3e-155 553.9 519 60.9
Sp4g27560 Schrenkiella parvula HOM05D000921 ORTHO05D002852 1.1e-154 550.8 543 56.5
Lsat_1_v5_gn_3_135480 Lactuca sativa HOM05D000921 ORTHO05D002852 9.4e-154 547.7 519 59.3
A05p05550 Brassica napus HOM05D000921 ORTHO05D002852 2.7e-153 546.2 538 57.1
THA.LOC104827617 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 1.4e-152 543.9 548 56.8
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.8e-152 543.5 543 57.1
Thhalv10001277m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 1.8e-152 543.5 538 56.9
vmacro13368 Vaccinium macrocarpon HOM05D000921 ORTHO05D002852 1.8e-152 543.5 538 58.0
ATR0757G054 Amborella trichopoda HOM05D000921 ORTHO05D002852 7.4e-151 538.1 534 59.2
ECA240G3430 Erigeron canadensis HOM05D000921 ORTHO05D002852 1.3e-150 537.3 522 58.8
CDE11G1134 Ceratophyllum demersum HOM05D000921 ORTHO05D002852 1.8e-149 533.5 518 57.3
BolC4t22272H Brassica oleracea HOM05D000921 ORTHO05D002852 2.6e-148 529.6 545 56.3
BraA05t19525Z Brassica rapa HOM05D000921 ORTHO05D002852 1.1e-146 524.2 574 53.7
MBI12_g38016_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 3.6e-145 519.2 517 56.1
Aa31LG10G15130 Aethionema arabicum HOM05D000921 ORTHO05D002852 4.7e-145 518.8 540 54.4
HanXRQChr03g0093641 Helianthus annuus HOM05D000921 ORTHO05D002852 6.1e-145 518.5 519 57.2
Os04g0555600 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 1.4e-144 517.3 529 55.4
Sp5g02330 Schrenkiella parvula HOM05D000921 ORTHO05D002852 3.9e-144 515.8 533 54.8
A04p01340 Brassica napus HOM05D000921 ORTHO05D002852 3.7e-142 509.2 519 57.0
BraA04t15853Z Brassica rapa HOM05D000921 ORTHO05D002852 1.4e-141 507.3 519 55.7
Carub.0005s2767 Capsella rubella HOM05D000921 ORTHO05D002852 5.3e-141 505.4 536 53.4
unitig_22.g5373 Utricularia gibba HOM05D000921 ORTHO05D002852 5.3e-141 505.4 527 55.6
GSVIVG01027547001 Vitis vinifera HOM05D000921 ORTHO05D002852 7.0e-141 505.0 519 55.7
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 2.0e-140 503.4 521 54.5
Thhalv10005733m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 2.6e-140 503.1 518 54.2
AL5G43240 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 1.0e-139 501.1 537 52.9
Oeu029683.1 Olea europaea HOM05D000921 ORTHO05D002852 1.1e-138 497.7 556 52.7
DCAR_006882 Daucus carota HOM05D000921 ORTHO05D002852 2.7e-137 493.0 520 54.4
BolC8t51174H Brassica oleracea HOM05D000921 ORTHO05D002852 3.6e-137 492.7 527 54.8
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 8.0e-137 491.5 520 54.6
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 8.0e-137 491.5 520 54.6
C08p35860 Brassica napus HOM05D000921 ORTHO05D002852 1.4e-136 490.7 527 54.8
BcaC07g40611 Brassica carinata HOM05D000921 ORTHO05D002852 1.8e-136 490.3 527 54.6
BcaC07g42649 Brassica carinata HOM05D000921 ORTHO05D002852 4.0e-136 489.2 519 54.1
Os02g0663300 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 8.2e-134 481.5 524 51.0
Zm00001eb249850 Zea mays HOM05D000921 ORTHO05D002852 1.4e-133 480.7 522 52.3
A09p53140 Brassica napus HOM05D000921 ORTHO05D002852 2.4e-133 479.9 527 52.9
BraA09t40739Z Brassica rapa HOM05D000921 ORTHO05D002852 2.4e-133 479.9 527 52.9
CARHR171310 Cardamine hirsuta HOM05D000921 ORTHO05D002852 2.6e-132 476.5 529 52.9
Oeu003495.3 Olea europaea HOM05D000921 ORTHO05D002852 2.0e-124 450.3 519 51.4
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 1.0e-123 448.0 542 49.4
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 4.2e-122 442.6 518 51.0
Phvul.010G049000 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 2.3e-120 436.8 294 77.2
AT3G60920 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 2.0e-116 423.7 491 50.7
HPP92_003358 Vanilla planifolia HOM05D000921 ORTHO05D002852 3.3e-114 416.4 526 47.5
SMO347G0262 Selaginella moellendorffii HOM05D000921 ORTHO05D002852 9.5e-114 414.8 515 46.0
CARHR140720 Cardamine hirsuta HOM05D000921 ORTHO05D002852 3.6e-113 412.9 432 55.1
AagrBONN_evm.TU.Sc2ySwM_117.767 Anthoceros agrestis HOM05D000921 ORTHO05D002852 3.9e-107 392.9 545 44.6
Mapoly0056s0137 Marchantia polymorpha HOM05D000921 ORTHO05D002852 2.8e-105 386.7 561 43.7
Pp3c25_6190 Physcomitrium patens HOM05D000921 ORTHO05D002852 2.8e-105 386.7 554 44.4
HPP92_009978 Vanilla planifolia HOM05D000921 ORTHO05D002852 1.0e-104 384.8 521 47.0
Pp3c8_11180 Physcomitrium patens HOM05D000921 ORTHO05D002852 1.5e-103 380.9 555 42.9
arahy.Tifrunner.gnm1.ann1.P2FPY5 Arachis hypogaea HOM05D000921 ORTHO05D002852 8.6e-99 365.2 520 46.2
Pp3c16_14330 Physcomitrium patens HOM05D000921 ORTHO05D002852 1.1e-98 364.8 556 41.9
AL937U10010 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 3.0e-83 313.5 218 70.2
Cpa.g.sc18.152 Carica papaya HOM05D000921 ORTHO05D002852 1.5e-66 258.1 165 73.9
Actinidia31439 Actinidia chinensis HOM05D000921 ORTHO05D002852 1.6e-65 254.6 206 65.0
Gohir.D08G042866 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.1e-64 250.4 517 38.1
CBR_g26196 Chara braunii HOM05D000921 ORTHO05D002852 7.9e-60 235.7 565 32.4
MD10G1005600 Malus domestica HOM05D000921 ORTHO05D002852 1.1e-48 198.7 216 54.2
Cpa.g.sc18.151 Carica papaya HOM05D000921 ORTHO05D002852 7.7e-39 166.0 196 51.5
arahy.Tifrunner.gnm1.ann1.JZMQ8V Arachis hypogaea HOM05D000921 ORTHO05D002852 1.4e-37 161.8 92 84.8
FAN23G1025 Fragaria x ananassa HOM05D000949 ORTHO05D001276 6.3e-17 93.2 106 54.7
Lsat_1_v5_gn_4_182080 Lactuca sativa HOM05D000921 ORTHO05D002852 1.3e-14 85.5 84 56.0
AUR62037342 Chenopodium quinoa HOM05D000921 ORTHO05D002852 1.5e-13 82.0 90 52.2
Lsat_1_v5_gn_4_116401 Lactuca sativa HOM05D000921 ORTHO05D002852 5.0e-06 57.0 38 71.1
Lsat_1_v5_gn_4_100180 Lactuca sativa HOM05D000921 ORTHO05D026843 6.5e-06 56.6 38 71.1


User provided reference genes

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