Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 1.2e-89 333.2 170 100.0
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.5e-55 219.2 183 66.7
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.7e-43 179.9 206 56.8
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.9e-43 179.1 185 54.6
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 6.4e-43 177.9 184 55.4
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.4e-42 176.8 184 54.9
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 3.2e-42 175.6 178 53.9
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 9.2e-42 174.1 184 52.2
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.2e-41 173.7 194 52.1
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.6e-41 173.3 158 58.9
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.0e-41 172.9 183 52.5
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.7e-41 172.6 183 52.5
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.7e-40 169.9 184 55.4
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.5e-39 166.8 185 52.4
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 7.3e-39 164.5 151 68.9
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 9.5e-39 164.1 165 53.9
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.6e-38 163.3 184 52.2
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 2.1e-38 162.9 185 51.9
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.1e-38 162.9 179 48.6
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 3.6e-38 162.2 183 49.7
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 4.7e-38 161.8 198 48.0
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 6.2e-38 161.4 184 47.3
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 8.1e-38 161.0 185 49.2
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 8.1e-38 161.0 184 47.3
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 8.1e-38 161.0 182 49.5
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.1e-37 160.6 185 51.4
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.4e-37 160.2 188 47.9
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.8e-37 159.8 187 48.1
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.8e-37 159.8 184 49.5
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 8.9e-37 157.5 145 55.9
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 8.9e-37 157.5 189 49.2
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.5e-36 156.8 184 50.0
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 2.0e-36 156.4 188 47.9
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 2.6e-36 156.0 126 64.3
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 2.6e-36 156.0 185 47.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 4.4e-36 155.2 183 48.1
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 7.5e-36 154.5 200 43.0
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 7.5e-36 154.5 181 48.6
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 7.5e-36 154.5 189 47.1
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.3e-35 153.7 179 45.8
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.3e-35 153.7 180 48.9
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.3e-35 153.7 187 47.1
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.7e-35 152.1 179 46.4
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 4.9e-35 151.8 183 46.4
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 4.9e-35 151.8 190 44.2
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 6.4e-35 151.4 188 46.3
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 8.3e-35 151.0 186 48.4
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 8.3e-35 151.0 184 48.4
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.1e-34 150.6 190 43.7
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.4e-34 150.2 153 58.2
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 1.4e-34 150.2 130 60.8
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.9e-34 149.8 185 45.9
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 2.4e-34 149.4 183 47.5
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 4.1e-34 148.7 128 57.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 1.6e-33 146.7 183 45.9
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 2.1e-33 146.4 194 44.3
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 2.1e-33 146.4 218 42.2
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 4.6e-33 145.2 176 49.4
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 7.8e-33 144.4 174 46.6
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 7.8e-33 144.4 183 45.9
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.0e-32 144.1 181 45.3
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.3e-32 143.7 181 44.2
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 1.3e-32 143.7 181 44.2
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 6.6e-32 141.4 183 44.3
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 8.6e-32 141.0 153 51.0
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 1.5e-31 140.2 126 57.9
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.9e-31 139.8 180 46.7
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 2.5e-31 139.4 149 51.0
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 7.3e-31 137.9 188 41.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 7.3e-31 137.9 188 41.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 7.3e-31 137.9 187 44.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 9.5e-31 137.5 201 42.8
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.2e-30 137.1 169 48.5
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.6e-30 136.7 182 44.5
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 2.1e-30 136.3 182 44.5
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.8e-30 136.0 180 43.9
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.8e-30 136.0 182 44.5
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 2.8e-30 136.0 127 55.9
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 2.8e-30 136.0 215 40.5
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 3.6e-30 135.6 183 43.7
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.6e-30 135.6 187 39.0
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 4.7e-30 135.2 182 44.0
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 4.0e-29 132.1 187 39.0
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.6e-28 127.9 125 53.6
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 9.9e-28 127.5 125 53.6
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.3e-27 127.1 125 53.6
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.2e-27 126.3 125 52.0
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 3.8e-27 125.6 123 54.5
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 7.1e-26 121.3 169 44.4
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 7.1e-26 121.3 203 39.4
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 2.3e-24 116.3 186 36.6
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 6.6e-24 114.8 124 44.4
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 6.9e-21 104.8 114 46.5
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 1.2e-20 104.0 143 39.9
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.6e-20 102.8 113 45.1
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 6.4e-19 98.2 100 48.0
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.1e-18 97.4 206 34.5
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 1.2e-17 94.0 85 60.0
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.1e-17 93.2 173 32.9
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.0e-16 90.9 145 38.6
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.3e-16 90.5 134 35.1
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 1.1e-15 87.4 183 30.1
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 7.3e-15 84.7 162 32.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 3.1e-13 79.3 115 36.5
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 7.6e-12 74.7 186 29.0
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 8.7e-08 61.2 62 50.0


User provided reference genes

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