Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 0.0e+00 1125.9 540 100.0
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 5.5e-290 1000.3 569 86.6
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 6.7e-288 993.4 569 86.3
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 5.9e-276 953.7 569 81.9
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 2.9e-275 951.4 569 81.9
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 2.9e-275 951.4 569 81.7
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 6.5e-275 950.3 569 81.9
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 6.5e-275 950.3 569 81.7
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 8.5e-275 949.9 564 82.3
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 2.5e-274 948.3 569 81.4
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 6.7e-272 940.3 569 80.5
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 2.8e-270 934.9 569 80.3
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 3.7e-270 934.5 570 80.4
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 2.2e-267 925.2 561 79.9
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 2.2e-267 925.2 559 80.5
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 4.7e-265 917.5 551 80.8
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 8.0e-265 916.8 549 80.5
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 1.0e-264 916.4 570 78.1
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 1.8e-264 915.6 561 78.6
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.8e-264 915.6 561 78.1
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 2.3e-264 915.2 549 80.5
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 4.0e-264 914.4 561 77.9
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 5.2e-264 914.1 562 78.6
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.2e-263 912.9 569 77.9
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 1.5e-263 912.5 561 78.1
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 2.0e-263 912.1 549 79.8
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 2.6e-263 911.8 549 80.0
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 4.4e-263 911.0 572 78.8
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 2.8e-262 908.3 563 78.9
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 2.8e-262 908.3 549 79.2
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 2.8e-262 908.3 550 79.6
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 6.3e-262 907.1 549 79.1
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 1.1e-261 906.4 549 78.9
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.4e-261 906.0 564 77.7
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 5.3e-261 904.0 566 77.4
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 2.0e-260 902.1 556 78.8
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 2.7e-260 901.7 547 79.5
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 3.5e-260 901.4 550 78.9
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 1.3e-259 899.4 570 76.8
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 1.3e-259 899.4 549 79.4
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 1.7e-259 899.0 550 78.9
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 1.7e-259 899.0 556 78.6
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.9e-259 898.3 550 78.9
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 2.9e-259 898.3 552 78.3
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.8e-259 897.9 556 78.2
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 3.8e-259 897.9 586 74.7
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 5.0e-259 897.5 550 78.7
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 5.0e-259 897.5 564 77.8
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 6.5e-259 897.1 563 76.7
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 8.5e-259 896.7 564 77.3
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 1.5e-258 896.0 564 77.7
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 2.5e-258 895.2 562 77.2
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 3.2e-258 894.8 569 77.5
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 4.2e-258 894.4 549 79.1
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 1.2e-257 892.9 597 73.2
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 2.1e-257 892.1 545 78.2
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 3.6e-257 891.3 552 77.4
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 6.1e-257 890.6 552 77.4
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 6.1e-257 890.6 569 76.6
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 1.0e-256 889.8 569 76.3
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 1.8e-256 889.0 568 77.5
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 5.2e-256 887.5 547 78.6
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 6.8e-256 887.1 552 77.2
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 8.8e-256 886.7 557 76.7
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 1.5e-255 885.9 570 77.0
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 3.4e-255 884.8 552 77.2
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 7.5e-255 883.6 552 77.0
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 9.8e-255 883.2 552 77.2
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 2.8e-254 881.7 552 76.4
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 3.7e-254 881.3 549 77.2
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 1.1e-253 879.8 546 78.4
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 2.4e-253 878.6 552 77.0
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 3.1e-253 878.2 553 75.8
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 3.5e-252 874.8 558 76.5
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 4.5e-252 874.4 549 76.7
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 4.5e-252 874.4 554 76.9
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 1.3e-251 872.8 558 76.3
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 5.0e-251 870.9 552 76.1
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 1.9e-250 869.0 562 74.7
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 3.2e-250 868.2 569 73.1
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 4.2e-250 867.8 543 77.9
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-248 862.8 564 74.1
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 1.8e-248 862.4 560 75.0
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 2.0e-247 859.0 565 72.9
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 8.3e-246 853.6 541 76.0
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 1.4e-245 852.8 565 72.4
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 4.1e-245 851.3 567 75.3
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 1.6e-244 849.4 561 72.7
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 2.0e-244 849.0 569 73.3
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 1.0e-243 846.7 562 72.1
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 2.9e-243 845.1 562 72.2
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 2.5e-242 842.0 481 83.6
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 3.3e-242 841.6 542 75.5
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 2.1e-241 839.0 543 76.4
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 4.7e-241 837.8 553 73.6
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.0e-235 820.1 537 72.6
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.7e-235 819.3 537 72.4
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.5e-234 815.5 554 72.4
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 1.8e-232 809.3 542 70.5
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 1.1e-229 800.0 569 71.2
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 1.7e-227 792.7 538 72.7
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 5.6e-226 787.7 544 69.5
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 3.6e-225 785.0 455 84.4
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 8.1e-225 783.9 497 75.5
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 1.4e-224 783.1 543 69.6
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.2e-223 780.0 550 68.4
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.7e-222 776.2 481 76.9
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 7.1e-221 770.8 564 68.1
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 2.5e-218 762.3 547 68.2
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 9.5e-218 760.4 548 67.2
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 8.1e-217 757.3 560 69.6
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 7.6e-215 750.7 424 84.9
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 2.4e-213 745.7 423 85.3
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 1.5e-207 726.5 549 65.6
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 9.9e-207 723.8 564 66.3
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 3.9e-203 711.8 556 61.7
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 7.1e-197 691.0 536 62.5
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 2.1e-196 689.5 540 61.7
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 3.0e-195 685.6 586 62.1
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 1.2e-191 673.7 546 61.5
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.4e-190 667.9 534 62.7
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.4e-190 667.9 534 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 7.1e-189 664.5 541 59.7
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 5.9e-175 618.2 330 91.8
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 1.1e-162 577.4 334 82.9
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 1.8e-144 516.9 292 85.6
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 7.5e-138 495.0 554 52.0
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.3e-137 494.2 279 86.4
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 4.4e-130 469.2 549 46.1
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 2.8e-124 449.9 309 71.5
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 3.2e-104 383.3 356 57.9
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 7.1e-96 355.5 199 85.4
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.6e-71 274.6 501 38.5
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 6.0e-63 246.1 133 87.2
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.4e-59 235.0 336 42.3
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 5.7e-53 213.0 137 76.6
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.8e-51 208.0 186 55.9
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 2.4e-51 207.6 129 74.4
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 4.1e-51 206.8 131 79.4
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.5e-50 204.9 137 71.5
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 7.2e-48 196.1 127 73.2
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 7.2e-48 196.1 127 73.2
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 6.1e-47 193.0 109 78.0
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 1.5e-45 188.3 120 71.7
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 1.5e-45 188.3 120 71.7
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 1.8e-43 181.4 119 72.3
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 1.8e-43 181.4 119 72.3
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 1.4e-40 171.8 95 82.1
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.6e-39 167.2 107 73.8
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 7.4e-37 159.5 79 97.5
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 9.7e-37 159.1 131 62.6
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 3.4e-29 134.0 74 78.4
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 2.5e-24 117.9 189 42.9
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 1.6e-23 115.2 66 78.8
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 2.9e-17 94.4 76 56.6
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 3.6e-15 87.4 63 66.7
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.0e-14 85.9 64 64.1
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 6.3e-12 76.6 50 66.0


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