Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 4.2e-273 944.1 482 100.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.5e-230 802.7 483 82.6
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 3.2e-225 785.0 482 81.7
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 5.5e-209 731.1 435 83.0
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.0e-207 726.9 436 80.5
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 8.3e-205 717.2 439 78.8
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 8.3e-205 717.2 434 80.6
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 7.7e-203 710.7 439 77.7
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 3.6e-200 701.8 478 74.1
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 9.9e-174 614.0 470 65.3
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 3.7e-173 612.1 434 68.9
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.7e-173 612.1 430 66.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 3.7e-173 612.1 430 67.0
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 5.4e-172 608.2 432 68.8
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 2.7e-171 605.9 434 67.3
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 6.0e-171 604.7 429 67.6
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 6.0e-171 604.7 433 68.1
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.3e-170 602.8 432 68.1
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.1e-168 596.3 432 65.0
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.1e-168 596.3 431 65.0
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 3.6e-168 595.5 432 67.1
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.1e-167 594.0 432 68.5
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 2.4e-167 592.8 435 68.0
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 5.2e-167 591.7 432 65.3
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 6.8e-167 591.3 432 66.0
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.2e-166 590.5 431 65.2
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.5e-166 590.1 432 66.7
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.6e-166 589.3 431 65.0
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 3.4e-166 589.0 432 66.4
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 3.4e-166 589.0 432 65.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 5.8e-166 588.2 433 66.3
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 5.8e-166 588.2 430 66.7
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 4.9e-165 585.1 425 65.2
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.4e-164 582.8 443 63.4
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.6e-163 580.1 431 65.7
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 2.3e-162 576.2 408 67.9
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 6.6e-162 574.7 431 64.7
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 4.3e-161 572.0 432 64.4
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 5.3e-159 565.1 427 63.5
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 1.7e-157 560.1 432 61.1
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 4.9e-157 558.5 428 64.3
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.9e-156 556.6 432 61.1
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 7.1e-156 554.7 429 64.1
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 3.5e-155 552.4 399 65.7
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.7e-154 550.1 432 60.9
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 8.7e-154 547.7 428 62.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.5e-153 547.0 434 62.2
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 4.3e-153 545.4 427 63.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 4.3e-153 545.4 460 59.8
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.1e-152 543.1 432 62.3
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.1e-151 540.8 418 63.9
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 9.0e-151 537.7 450 60.4
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.5e-150 537.0 431 61.7
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.5e-150 537.0 433 61.2
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 2.0e-150 536.6 433 62.1
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.2e-149 533.1 434 60.8
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.2e-149 533.1 434 60.4
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 6.4e-149 531.6 428 61.7
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.4e-148 529.6 433 61.0
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 2.4e-148 529.6 434 60.6
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 7.1e-148 528.1 433 61.0
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.6e-147 526.9 434 60.4
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 2.1e-147 526.6 439 60.4
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.3e-146 523.1 428 60.0
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 3.0e-146 522.7 441 59.0
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 5.1e-146 521.9 440 60.2
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.6e-145 518.5 399 63.7
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 9.6e-145 517.7 440 60.7
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.3e-144 517.3 440 60.0
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.3e-144 517.3 446 58.3
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.1e-143 514.2 436 57.1
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 2.2e-141 506.5 303 79.5
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 2.9e-141 506.1 431 58.9
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 3.8e-141 505.8 471 56.9
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 8.4e-141 504.6 399 61.2
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.1e-140 504.2 361 66.2
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.3e-137 492.3 430 56.5
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 7.4e-137 491.5 431 55.9
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 6.2e-136 488.4 430 56.5
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.4e-135 487.3 495 51.3
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 7.6e-134 481.5 441 55.1
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 5.5e-132 475.3 432 55.1
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.1e-131 471.9 443 54.6
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.9e-129 466.8 428 52.8
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.4e-126 456.1 439 55.1
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.8e-122 443.7 715 38.2
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 8.2e-120 434.9 303 67.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.6e-118 429.9 443 49.7
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.1e-113 414.5 313 65.2
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 7.4e-113 411.8 295 66.4
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 5.3e-111 405.6 365 52.6
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.9e-108 397.1 371 56.1
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 5.5e-108 395.6 368 50.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 2.4e-103 380.2 316 60.1
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 5.3e-103 379.0 298 60.1
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.5e-102 376.3 227 83.3
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 2.9e-101 373.2 316 60.4
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 2.5e-100 370.2 428 47.0
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 2.0e-97 360.5 318 58.5
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.6e-97 360.1 401 46.9
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.8e-95 354.0 313 58.1
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.7e-91 339.3 400 45.5
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.8e-88 330.1 219 69.9
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.7e-88 329.7 193 83.4
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.9e-77 293.1 239 61.1
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 4.3e-76 289.7 350 46.3
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.3e-74 283.9 436 40.6
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 4.9e-72 276.2 212 65.6
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 8.9e-66 255.4 216 58.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.8e-58 231.1 212 57.1
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 3.2e-55 220.3 141 79.4
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 4.1e-55 219.9 138 81.2
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 6.6e-53 212.6 138 80.4
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.7e-46 190.7 174 54.0
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 1.0e-45 188.7 229 44.5
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.8e-43 179.9 135 62.2
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.4e-39 168.3 115 68.7
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 4.5e-25 120.2 86 60.5
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 3.5e-22 110.5 144 36.8
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.6e-22 110.2 76 69.7
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 7.9e-22 109.4 395 27.1
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.8e-21 108.2 375 25.1
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 6.7e-21 106.3 374 25.4
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 4.1e-18 97.1 137 47.4
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 1.3e-11 75.5 407 23.1
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 2.2e-11 74.7 47 74.5


User provided reference genes

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