Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23003_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.5e-89 330.5 165 100.0
Ca_30084_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.5e-89 330.5 165 100.0
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.3e-29 133.7 180 46.7
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 6.0e-22 108.2 101 61.4
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.9e-22 107.8 109 58.7
Ca_19703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.9e-21 105.5 103 59.2
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 6.7e-21 104.8 222 35.1
Ca_26542_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.1e-20 104.0 106 56.6
Ca_14409_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 9.6e-20 100.9 109 55.0
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.8e-19 99.4 151 46.4
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.8e-19 98.6 109 56.0
Ca_03865_v3 Cicer arietinum L. HOM05D002644 ORTHO05D010767 6.2e-19 98.2 101 58.4
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 6.2e-19 98.2 203 37.4
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 5.3e-18 95.1 183 38.3
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 9.9e-17 90.9 143 44.8
Ca_20168_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.9e-16 89.4 81 60.5
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 8.4e-16 87.8 211 34.1
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.4e-15 87.0 219 31.1
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 2.7e-14 82.8 217 30.0
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 4.6e-14 82.0 112 39.3
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 6.7e-13 78.2 99 47.5
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 8.7e-13 77.8 100 41.0
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 8.7e-13 77.8 100 41.0
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 1.1e-12 77.4 132 43.2
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-12 76.6 221 27.6
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 2.5e-12 76.3 221 25.3
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 9.6e-12 74.3 172 30.2
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 9.6e-12 74.3 254 26.4
Ca_25752_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.3e-11 73.9 91 51.6
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.8e-11 72.8 209 27.8
Ca_02603_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.7e-11 72.4 79 55.7
Medtr8g040975 Medicago truncatula HOM05D009226 ORTHO05D010767 1.4e-10 70.5 83 45.8
TPR.G33013 Trifolium pratense HOM05D009226 ORTHO05D010767 1.4e-10 70.5 89 47.2
Medtr5g048720 Medicago truncatula HOM05D009226 ORTHO05D010767 3.1e-10 69.3 65 52.3
Medtr8g057120 Medicago truncatula HOM05D000107 ORTHO05D000062 3.1e-10 69.3 65 52.3
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 4.0e-10 68.9 135 37.8
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 6.9e-10 68.2 101 41.6
TPR.G15912 Trifolium pratense HOM05D009226 ORTHO05D010767 9.0e-10 67.8 84 47.6
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 3.4e-09 65.9 203 27.1
Psat0s1103g0040 Pisum sativum HOM05D009226 ORTHO05D010767 3.4e-09 65.9 143 35.7
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 4.5e-09 65.5 195 27.2
Ca_19080_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.5e-09 65.5 87 49.4
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.5e-09 65.5 98 37.8
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 5.8e-09 65.1 69 49.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.2e-08 63.2 185 27.0
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 2.2e-08 63.2 185 27.0
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-08 63.2 176 28.4
Ca_08360_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.9e-08 62.8 56 60.7
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 3.8e-08 62.4 151 32.5
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 4.9e-08 62.0 210 27.1
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 8.4e-08 61.2 170 28.2
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 8.4e-08 61.2 206 27.7
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 1.1e-07 60.8 179 28.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 1.4e-07 60.5 100 39.0
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 3.2e-07 59.3 206 27.7
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.2e-07 59.3 189 24.9
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-07 58.9 122 34.4
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 5.5e-07 58.5 221 27.6
Medtr4g088560 Medicago truncatula HOM05D009226 ORTHO05D010767 5.5e-07 58.5 54 51.9
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.5e-07 58.5 215 24.7
Psat6g153520 Pisum sativum HOM05D009226 ORTHO05D010767 5.5e-07 58.5 69 55.1
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 7.1e-07 58.2 94 36.2
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 9.3e-07 57.8 130 33.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 9.3e-07 57.8 170 26.5
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-07 57.8 145 29.7
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-06 57.0 139 32.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-06 57.0 147 29.3
arahy.Tifrunner.gnm1.ann1.KMI722 Arachis hypogaea HOM05D009662 ORTHO05D003353 3.5e-06 55.8 97 32.0
Psat6g163120 Pisum sativum HOM05D009226 ORTHO05D010767 3.5e-06 55.8 69 53.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.6e-06 55.5 189 25.4
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-06 55.1 158 30.4
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 6.0e-06 55.1 70 47.1
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-06 54.7 107 32.7


User provided reference genes

Program Settings