Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21890_v3 Cicer arietinum L. HOM05D007129 ORTHO05D008680 1.9e-153 545.8 271 100.0
Psat4g055920 Pisum sativum HOM05D007129 ORTHO05D008680 8.5e-74 281.2 179 81.0
Medtr4g106380 Medicago truncatula HOM05D007129 ORTHO05D008680 1.9e-73 280.0 179 79.9
TPR.G37473 Trifolium pratense HOM05D007129 ORTHO05D008680 1.5e-70 270.4 170 80.6
arahy.Tifrunner.gnm1.ann1.JUK8XQ Arachis hypogaea HOM05D007129 ORTHO05D008680 2.0e-67 260.0 181 72.9
Phvul.003G197200 Phaseolus vulgaris HOM05D007129 ORTHO05D008680 1.0e-66 257.7 162 76.5
arahy.Tifrunner.gnm1.ann1.N0S5JS Arachis hypogaea HOM05D007129 ORTHO05D008680 8.5e-66 254.6 166 77.1
Glyma.U031407 Glycine max HOM05D007129 ORTHO05D008680 7.2e-65 251.5 162 75.3
VMungo1215G0430 Vigna mungo HOM05D007129 ORTHO05D008680 7.2e-65 251.5 162 74.7
Lj4g0013003 Lotus japonicus HOM05D007129 ORTHO05D008680 1.0e-63 247.7 159 76.7
Lalb_Chr12g0201391 Lupinus albus HOM05D007129 ORTHO05D008680 2.3e-58 229.9 169 69.2
QL10p012428 Quercus lobata HOM05D007129 ORTHO05D008680 2.8e-56 223.0 166 68.7
CANSAT80G0701 Cannabis sativa HOM05D007129 ORTHO05D008680 6.1e-56 221.9 185 61.1
Dinv09179 Davidia involucrata HOM05D007129 ORTHO05D008680 3.0e-55 219.5 189 60.3
MD06G1180800 Malus domestica HOM05D007129 ORTHO05D008680 5.2e-55 218.8 162 67.3
Lj9A453T29 Lonicera japonica HOM05D007129 ORTHO05D008680 6.8e-55 218.4 176 62.5
vmacro16590 Vaccinium macrocarpon HOM05D007129 ORTHO05D008680 6.8e-55 218.4 175 65.1
TWI15G0302 Tripterygium wilfordii HOM05D007129 ORTHO05D008680 8.9e-55 218.0 169 65.1
CSS0035860 Camellia sinensis var. sinensis HOM05D007129 ORTHO05D008680 2.0e-54 216.9 170 65.9
Haze_07441 Corylus avellana HOM05D007129 ORTHO05D008680 3.4e-54 216.1 170 63.5
Thecc.03G005100 Theobroma cacao HOM05D007129 ORTHO05D008680 3.4e-54 216.1 174 63.8
FvH4_5g16440 Fragaria vesca HOM05D007129 ORTHO05D008680 4.4e-54 215.7 165 66.1
FAN18G4566 Fragaria x ananassa HOM05D007129 ORTHO05D008680 4.4e-54 215.7 165 66.1
Cfa019070 Carpinus fangiana HOM05D007129 ORTHO05D008680 7.5e-54 214.9 170 63.5
Ciclev10021561m.g Citrus clementina HOM05D007129 ORTHO05D008680 7.5e-54 214.9 180 60.6
RcHm_v2.0_Chr7g0179661 Rosa chinensis HOM05D007129 ORTHO05D008680 7.5e-54 214.9 173 64.2
Rhsim12G0161900 Rhododendron simsii HOM05D007129 ORTHO05D008680 1.3e-53 214.2 185 61.1
CiPaw.11G031300 Carya illinoinensis HOM05D007129 ORTHO05D008680 1.7e-53 213.8 165 64.8
Atru.chr9.2406 Acer truncatum HOM05D007129 ORTHO05D008680 2.2e-53 213.4 172 62.2
Eucgr.K02877 Eucalyptus grandis HOM05D007129 ORTHO05D008680 2.2e-53 213.4 173 61.8
FAN13G1816 Fragaria x ananassa HOM05D007129 ORTHO05D008680 2.2e-53 213.4 165 65.5
HanXRQChr09g0271771 Helianthus annuus HOM05D007129 ORTHO05D008680 2.8e-53 213.0 169 62.1
Duzib205G1103 Durio zibethinus HOM05D007129 ORTHO05D008680 6.3e-53 211.8 176 61.9
Sc12g0005690 Simmondsia chinensis HOM05D007129 ORTHO05D008680 6.3e-53 211.8 167 64.7
Cc00_g15150 Coffea canephora HOM05D007129 ORTHO05D008680 8.3e-53 211.5 179 59.2
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 1.4e-52 210.7 163 64.4
Gohir.D12G277500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 2.4e-52 209.9 189 57.7
Actinidia34958 Actinidia chinensis HOM05D002131 ORTHO05D008680 3.1e-52 209.5 169 65.1
Gorai.008G298100 Gossypium raimondii HOM05D007129 ORTHO05D008680 3.1e-52 209.5 189 58.2
Gohir.A12G276500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 5.4e-52 208.8 177 60.5
Hma1.2p1_1643F.1_g295180 Hydrangea macrophylla HOM05D007129 ORTHO05D008680 5.4e-52 208.8 185 58.9
Prupe.5G178800 Prunus persica HOM05D007129 ORTHO05D008680 7.0e-52 208.4 165 66.1
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 1.2e-51 207.6 156 64.7
PGR044G2359 Punica granatum HOM05D007129 ORTHO05D008680 1.6e-51 207.2 169 64.5
Sed0013262 Sechium edule HOM05D007129 ORTHO05D008680 3.5e-51 206.1 192 55.7
Duzib068G0087 Durio zibethinus HOM05D007129 ORTHO05D008680 4.5e-51 205.7 177 60.5
Solyc03g113880.4 Solanum lycopersicum HOM05D007129 ORTHO05D008680 5.9e-51 205.3 175 58.9
Cpa.g.sc35.61 Carica papaya HOM05D007129 ORTHO05D008680 7.8e-51 204.9 197 55.3
PGSC0003DMG401024472 Solanum tuberosum HOM05D007129 ORTHO05D008680 7.8e-51 204.9 165 63.0
ECA232G1293 Erigeron canadensis HOM05D000306 ORTHO05D000410 1.0e-50 204.5 181 58.6
Nitab4.5_0001642g0040 Nicotiana tabacum HOM05D007129 ORTHO05D008680 2.3e-50 203.4 177 58.2
Sabra15G0096300 Salix brachista HOM05D007129 ORTHO05D008680 2.3e-50 203.4 194 55.7
Sabra15G0095300 Salix brachista HOM05D007129 ORTHO05D008680 2.9e-50 203.0 195 55.4
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 3.8e-50 202.6 179 58.7
Hund02711 Selenicereus undatus HOM05D007129 ORTHO05D008680 5.0e-50 202.2 181 59.7
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 5.0e-50 202.2 175 58.3
MELO3C002241.2 Cucumis melo HOM05D007129 ORTHO05D008680 8.6e-50 201.4 189 56.1
Nitab4.5_0001286g0070 Nicotiana tabacum HOM05D007129 ORTHO05D008680 1.5e-49 200.7 178 56.7
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 1.9e-49 200.3 166 60.2
Migut.D01914 Erythranthe guttata HOM05D007129 ORTHO05D008680 2.5e-49 199.9 162 61.1
Aqoxy3G00879 Aquilegia oxysepala HOM05D007129 ORTHO05D008680 3.3e-49 199.5 181 57.5
Potri.015G071300 Populus trichocarpa HOM05D007129 ORTHO05D008680 4.3e-49 199.1 196 54.1
EL10Ac5g10824 Beta vulgaris HOM05D007129 ORTHO05D008680 7.3e-49 198.4 166 60.8
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 9.5e-49 198.0 177 59.3
CsaV3_1G008250 Cucumis sativus L. HOM05D007129 ORTHO05D008680 1.2e-48 197.6 172 58.1
Lsat_1_v5_gn_4_73321 Lactuca sativa HOM05D007129 ORTHO05D008680 2.1e-48 196.8 173 57.2
GSVIVG01007819001 Vitis vinifera HOM05D007129 ORTHO05D008680 2.1e-48 196.8 184 56.0
Aqoxy3G00878 Aquilegia oxysepala HOM05D007129 ORTHO05D008680 2.8e-48 196.4 187 55.6
TAR629G0718 Trochodendron aralioides HOM05D007129 ORTHO05D008680 3.6e-48 196.1 193 53.9
MSTRG.9665 Avicennia marina HOM05D007129 ORTHO05D008680 4.7e-48 195.7 170 58.2
CAN.G853.11 Capsicum annuum HOM05D007129 ORTHO05D008680 1.4e-47 194.1 164 60.4
Peaxi162Scf00017g02522 Petunia axillaris HOM05D007129 ORTHO05D008680 1.8e-47 193.7 165 58.8
AUR62008280 Chenopodium quinoa HOM05D007129 ORTHO05D008680 2.3e-47 193.4 209 51.7
AT3G47830 Arabidopsis thaliana HOM05D007129 ORTHO05D008680 4.0e-47 192.6 168 56.5
Nn4g22908 Nelumbo nucifera HOM05D007129 ORTHO05D008680 4.0e-47 192.6 201 51.7
Thhalv10010580m.g Eutrema salsugineum HOM05D007129 ORTHO05D008680 1.5e-46 190.7 175 56.6
Carub.0005s1394 Capsella rubella HOM05D007129 ORTHO05D008680 4.4e-46 189.1 169 56.8
ATR1149G142 Amborella trichopoda HOM05D007129 ORTHO05D008680 1.3e-45 187.6 178 51.7
THA.LOC104821441 Tarenaya hassleriana HOM05D007129 ORTHO05D008680 1.3e-45 187.6 166 56.6
AL5G27120 Arabidopsis lyrata HOM05D007129 ORTHO05D008680 2.9e-45 186.4 168 57.1
CARHR156520 Cardamine hirsuta HOM05D007129 ORTHO05D008680 1.9e-44 183.7 172 52.9
BraA01t02492Z Brassica rapa HOM05D007129 ORTHO05D008680 2.4e-44 183.3 159 56.6
Sp5g14130 Schrenkiella parvula HOM05D007129 ORTHO05D008680 4.1e-44 182.6 175 53.7
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 9.2e-44 181.4 164 55.5
BcaC09g49826 Brassica carinata HOM05D007129 ORTHO05D008680 1.6e-43 180.6 162 56.2
C01p32560 Brassica napus HOM05D007129 ORTHO05D008680 1.6e-43 180.6 162 56.2
MBI14_g22548_MAGBIO Magnolia biondii HOM05D007129 ORTHO05D008680 2.0e-43 180.3 214 49.1
BolC1t03194H Brassica oleracea HOM05D007129 ORTHO05D008680 2.7e-43 179.9 162 55.6
PSO478G1802 Papaver somniferum HOM05D007129 ORTHO05D008680 3.5e-43 179.5 186 53.2
A01p25760 Brassica napus HOM05D007129 ORTHO05D008680 1.0e-42 177.9 158 57.0
Manes.06G101100 Manihot esculenta HOM05D007129 ORTHO05D008680 5.0e-42 175.6 178 53.9
PSO161G0060 Papaver somniferum HOM05D007129 ORTHO05D008680 5.0e-42 175.6 185 52.4
Zm00001eb279940 Zea mays HOM05D007129 ORTHO05D008680 5.0e-42 175.6 171 53.8
FAN08G0536 Fragaria x ananassa HOM05D002131 ORTHO05D002141 6.2e-40 168.7 108 78.7
Aa31LG4G16490 Aethionema arabicum HOM05D007129 ORTHO05D008680 3.4e-38 162.9 207 44.9
AUR62031041 Chenopodium quinoa HOM05D002131 ORTHO05D008680 8.3e-37 158.3 151 57.6
Pp3c2_36940 Physcomitrium patens HOM05D007129 ORTHO05D008680 5.4e-36 155.6 193 44.0
SEGI_05000 Sequoiadendron giganteum HOM05D007129 ORTHO05D008680 3.0e-34 149.8 230 41.7
Mapoly0074s0054 Marchantia polymorpha HOM05D007129 ORTHO05D008680 1.9e-33 147.1 198 42.4
MCO09G188 Micromonas commoda HOM05D007129 ORTHO05D008680 5.6e-33 145.6 154 51.9
Sabra15G0076600 Salix brachista HOM05D007129 ORTHO05D008680 9.5e-33 144.8 105 69.5
CDE04G2311 Ceratophyllum demersum HOM05D007129 ORTHO05D008680 3.6e-32 142.9 96 70.8
BcaB05g23081 Brassica carinata HOM05D007129 ORTHO05D008680 2.6e-30 136.7 164 45.1
Migut.D01796 Erythranthe guttata HOM05D007129 ORTHO05D008680 6.4e-29 132.1 98 66.3
AagrBONN_evm.TU.Sc2ySwM_344.1694 Anthoceros agrestis HOM05D007129 ORTHO05D008680 3.5e-27 126.3 109 59.6
HPP92_010837 Vanilla planifolia HOM05D007129 ORTHO05D008680 1.3e-26 124.4 159 44.0
RcHm_v2.0_Chr3g0449251 Rosa chinensis HOM05D007129 ORTHO05D008680 6.4e-21 105.5 68 76.5
RcHm_v2.0_Chr1g0373441 Rosa chinensis HOM05D007129 ORTHO05D008680 9.2e-20 101.7 68 73.5
ClCG01G014100 Citrullus lanatus HOM05D007129 ORTHO05D008680 4.6e-19 99.4 103 48.5
Ah.08g219200 Amaranthus hybridus HOM05D007129 ORTHO05D008680 7.8e-19 98.6 112 50.9
Hma1.2p1_1643F.1_g295190 Hydrangea macrophylla HOM05D007129 ORTHO05D008680 7.8e-19 98.6 123 45.5
Ah.05g173910 Amaranthus hybridus HOM05D007129 ORTHO05D008680 1.7e-18 97.4 112 50.0
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 1.5e-14 84.3 112 46.4
GSVIVG01035300001 Vitis vinifera HOM05D000280 ORTHO05D008680 1.7e-13 80.9 65 58.5
Os06g0237900 Oryza sativa ssp. japonica HOM05D007129 ORTHO05D008680 6.0e-11 72.4 86 44.2
Cfa026956 Carpinus fangiana HOM05D000198 ORTHO05D008680 2.5e-09 67.0 138 32.6
C03p72050 Brassica napus HOM05D007129 ORTHO05D008680 3.6e-08 63.2 63 50.8


User provided reference genes

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