Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 3031.5 1654 100.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 2457.9 1670 84.2
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 2427.9 1669 82.9
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 2379.4 1672 81.9
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 2250.3 1680 77.8
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 2236.1 1680 77.4
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 2225.7 1700 76.6
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 2187.5 1680 76.0
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 2176.4 1681 75.5
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 2130.1 1688 73.9
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 2073.5 1686 73.0
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1664.4 1699 61.9
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1568.5 1694 59.4
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1567.4 1701 59.1
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1542.3 1694 58.7
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1542.3 1687 58.3
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1539.2 1705 58.0
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1530.0 1735 56.5
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1511.1 1697 57.9
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1491.5 1698 57.5
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1468.0 1637 55.6
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1463.0 1699 57.0
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1461.0 1701 57.2
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1428.3 1700 55.1
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1411.7 1698 54.9
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1411.4 1682 55.1
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1410.6 1681 55.4
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1407.9 1677 55.6
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1407.5 1685 55.8
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1407.1 1677 55.6
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1406.0 1681 56.3
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1405.6 1676 55.5
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1403.7 1714 53.0
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1397.1 1523 58.4
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1390.9 1703 54.8
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1384.0 1704 52.9
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1377.8 1489 59.9
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1377.5 1709 53.9
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1372.5 1686 53.0
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1366.7 1693 54.8
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1363.2 1409 59.7
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1335.1 1419 59.8
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1330.5 1709 52.4
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1307.0 1502 57.4
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1280.8 1632 53.4
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1268.1 1718 50.2
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1263.8 1619 52.4
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1263.8 1574 54.4
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1262.7 1213 64.5
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1256.9 1717 50.9
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1255.4 1587 53.3
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1254.6 1719 51.1
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1252.7 1647 52.3
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1250.3 1699 49.9
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1243.4 1312 61.4
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1231.9 1691 51.4
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1223.4 1625 52.2
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1218.0 1679 48.0
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1208.4 1692 49.8
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1206.0 1240 61.4
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1187.9 1407 54.2
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1187.6 1431 53.7
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1181.4 1680 48.6
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1160.2 1412 53.4
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1159.1 1475 51.6
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1142.1 1434 53.6
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1124.8 1711 45.5
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1117.4 1244 58.3
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1108.2 1257 57.4
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1080.1 964 64.0
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 2.3e-307 1059.7 1254 55.7
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 2.6e-306 1056.2 1421 52.4
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 3.6e-300 1035.8 1222 55.2
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 3.9e-294 1015.8 1201 56.0
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.0e-290 1003.4 1343 49.8
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 2.8e-284 983.0 1132 56.3
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.7e-270 934.9 950 59.4
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.2e-263 914.4 1032 60.1
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 6.4e-257 892.1 817 62.5
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.0e-238 831.6 1331 46.0
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.3e-236 824.7 1417 44.2
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 6.1e-231 805.8 1150 48.2
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 1.8e-230 804.3 1268 47.0
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 1.1e-171 609.0 749 57.5
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 7.6e-165 586.3 875 44.2
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.2e-138 499.2 551 55.0
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.4e-131 475.7 513 57.5
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 7.6e-125 453.4 1172 33.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 1.2e-122 446.0 717 45.6
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.2e-99 368.2 700 41.6
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.5e-72 279.6 259 57.9
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.2e-70 271.9 708 34.0
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 7.0e-70 270.8 247 61.5
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.9e-54 219.5 721 34.1
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 5.4e-54 218.0 215 60.0
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.5e-51 209.9 238 52.1
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 2.0e-48 199.5 440 35.9
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 2.2e-39 169.5 191 53.9
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 2.9e-39 169.1 183 53.6
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.4e-38 164.9 167 58.1
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 6.0e-37 161.4 172 52.9
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-29 135.6 287 35.5
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-24 120.6 130 61.5
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.5e-24 120.2 1338 23.3
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 5.8e-24 118.2 133 51.1
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 7.6e-24 117.9 105 59.0
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.1e-22 114.0 228 32.0
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 1.6e-18 100.1 281 28.1
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 4.8e-18 98.6 161 41.6
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 6.2e-18 98.2 277 33.2
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 4.0e-17 95.5 82 63.4
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.9e-15 88.6 87 54.0
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-14 85.5 59 61.0
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 6.0e-13 81.6 57 68.4
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 2.5e-06 59.7 51 62.7


User provided reference genes

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