Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 4.9e-64 247.7 126 100.0
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 7.7e-62 240.4 124 97.6
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 7.2e-60 233.8 123 95.1
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.1e-59 230.7 122 94.3
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 4.0e-58 228.0 123 92.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 3.4e-57 224.9 123 92.7
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 3.4e-57 224.9 123 92.7
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 3.4e-57 224.9 123 91.9
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 4.4e-57 224.6 123 91.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 7.5e-57 223.8 123 91.1
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.4e-55 219.5 122 90.2
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.1e-51 205.7 121 82.6
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 6.2e-51 204.1 123 80.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.0e-50 203.4 123 80.5
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.8e-50 202.6 124 82.3
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 4.0e-50 201.4 123 80.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 4.0e-50 201.4 122 78.7
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.0e-49 199.1 123 78.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 3.4e-49 198.4 123 80.5
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.4e-49 198.0 122 78.7
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 4.4e-49 198.0 123 76.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.8e-49 197.6 123 80.5
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 9.8e-49 196.8 122 77.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 9.8e-49 196.8 122 77.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 9.8e-49 196.8 123 81.3
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 9.8e-49 196.8 123 78.0
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 9.8e-49 196.8 123 77.2
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.3e-48 196.4 123 77.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.3e-48 196.4 123 77.2
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.7e-48 196.1 122 78.7
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 2.2e-48 195.7 123 78.0
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 3.7e-48 194.9 123 76.4
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 3.7e-48 194.9 123 77.2
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 3.7e-48 194.9 123 78.0
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 4.9e-48 194.5 123 76.4
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 4.9e-48 194.5 123 78.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.1e-47 193.4 123 77.2
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.4e-47 192.2 123 78.0
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 4.1e-47 191.4 123 77.2
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.1e-47 191.4 120 77.5
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 7.0e-47 190.7 123 76.4
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 7.0e-47 190.7 119 79.8
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.2e-47 190.3 123 74.8
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.2e-47 190.3 123 77.2
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.2e-46 189.9 119 73.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 74.0
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.2e-46 189.9 123 75.6
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.2e-46 189.9 124 74.2
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.6e-46 189.5 123 72.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.6e-46 189.5 123 75.6
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.6e-46 189.5 123 74.8
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.6e-46 189.5 123 75.6
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 2.0e-46 189.1 123 75.6
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 2.0e-46 189.1 123 74.8
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.0e-46 189.1 123 74.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.0e-46 189.1 123 76.4
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.7e-46 188.7 122 72.1
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.7e-46 188.7 122 74.6
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 3.5e-46 188.3 123 74.8
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 3.5e-46 188.3 123 74.8
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 4.6e-46 188.0 119 76.5
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.0e-46 187.6 123 74.8
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 7.8e-46 187.2 123 74.0
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 7.8e-46 187.2 123 74.8
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.7e-45 186.0 117 76.9
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.7e-45 186.0 117 76.9
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.7e-45 186.0 123 74.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.3e-45 185.7 118 76.3
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.9e-45 184.9 119 80.7
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 8.6e-45 183.7 145 65.5
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 8.6e-45 183.7 119 79.8
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.9e-44 182.6 122 74.6
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 4.3e-44 181.4 117 76.1
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.3e-44 180.6 120 72.5
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 7.3e-44 180.6 122 73.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 9.5e-44 180.3 154 61.7
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.1e-43 179.1 119 72.3
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.1e-42 176.8 123 74.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.3e-42 175.6 154 59.7
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 3.1e-42 175.3 123 74.8
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.2e-41 173.3 122 68.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.4e-41 171.8 124 66.9
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 4.4e-41 171.4 121 66.9
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.2e-40 169.1 143 62.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 8.3e-40 167.2 122 63.9
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.9e-39 166.0 123 68.3
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 9.5e-36 153.7 122 64.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 6.2e-35 151.0 119 64.7
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 8.1e-35 150.6 118 65.3
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-34 150.2 119 65.5
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.4e-34 149.8 97 75.3
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.4e-34 149.8 123 63.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.3e-34 149.1 91 80.2
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 7.6e-33 144.1 120 61.7
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 9.9e-33 143.7 124 57.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.2e-32 142.5 92 77.2
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.7e-32 141.7 93 75.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.9e-31 139.4 90 73.3
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 3.0e-29 132.1 90 73.3
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 8.6e-29 130.6 119 53.8
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.2e-27 126.7 114 62.3
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 3.6e-27 125.2 124 49.2
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.9e-23 112.8 82 69.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.1e-22 109.4 121 52.1
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 4.8e-19 98.2 114 47.4
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.1e-15 87.0 65 70.8
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 9.3e-15 84.0 59 74.6
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 2.1e-14 82.8 86 54.7
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-10 70.5 108 42.6
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.2e-08 62.8 42 69.0
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 3.8e-08 62.0 61 55.7
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 3.8e-08 62.0 61 55.7
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 5.5e-07 58.2 28 85.7
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 4.6e-06 55.1 69 46.4


User provided reference genes

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