Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.7e-174 615.9 314 100.0
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 9.7e-138 493.8 314 83.1
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 1.5e-135 486.5 314 81.5
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 5.5e-133 478.0 316 78.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 4.7e-132 474.9 315 79.0
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 2.8e-129 465.7 315 78.4
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.5e-127 459.9 315 77.1
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 2.6e-127 459.1 315 78.4
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.7e-113 413.3 315 71.4
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 1.2e-111 407.1 310 69.4
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 6.1e-108 394.8 291 73.9
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 9.2e-96 354.4 315 65.1
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 1.6e-95 353.6 326 59.8
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 5.9e-95 351.7 330 59.4
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 3.3e-93 345.9 318 58.8
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 5.6e-93 345.1 321 58.9
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.6e-92 343.6 318 58.5
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 2.8e-92 342.8 331 55.0
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 2.3e-91 339.7 323 57.3
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 3.1e-91 339.3 323 57.3
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 2.6e-90 336.3 321 57.9
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 2.6e-90 336.3 323 56.7
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 2.6e-90 336.3 324 58.6
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 7.5e-90 334.7 323 56.3
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 9.8e-90 334.3 318 56.6
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.7e-89 333.6 318 56.6
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 2.9e-89 332.8 322 57.1
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 6.4e-89 331.6 329 55.3
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 8.3e-89 331.3 319 55.8
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 8.3e-89 331.3 331 56.8
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 7.0e-88 328.2 320 56.6
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.2e-87 327.4 330 55.5
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.6e-87 327.0 330 55.8
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 2.7e-87 326.2 318 56.9
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.7e-87 326.2 317 58.0
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 4.6e-87 325.5 329 55.0
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.0e-86 322.8 323 54.5
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 3.9e-86 322.4 320 54.7
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 8.6e-86 321.2 323 56.7
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.1e-85 320.9 322 55.0
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 1.1e-85 320.9 325 55.1
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 2.5e-85 319.7 325 55.1
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 3.3e-85 319.3 325 55.1
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 4.3e-85 318.9 326 55.8
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.2e-84 317.4 334 54.8
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.6e-84 317.0 314 55.7
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 2.8e-84 316.2 320 55.3
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 8.1e-84 314.7 322 56.8
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 8.1e-84 314.7 322 56.8
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 8.1e-84 314.7 323 55.1
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 1.1e-83 314.3 322 55.6
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.1e-83 314.3 325 53.8
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 2.3e-83 313.2 324 54.9
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 4.0e-83 312.4 314 56.4
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 7.5e-82 308.1 326 51.8
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 7.5e-82 308.1 326 51.8
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 2.2e-81 306.6 315 55.6
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 2.9e-81 306.2 329 54.1
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.7e-81 305.8 322 55.0
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.9e-81 305.4 322 55.6
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 4.1e-80 302.4 314 54.1
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 7.1e-80 301.6 319 51.7
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 9.2e-80 301.2 341 50.7
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.2e-79 300.8 334 53.9
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.1e-79 300.1 334 53.6
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 2.7e-79 299.7 326 54.0
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 4.6e-79 298.9 322 51.6
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 4.6e-79 298.9 308 54.9
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 3.9e-78 295.8 314 52.2
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.5e-77 293.9 333 51.1
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 9.5e-77 291.2 336 52.4
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.1e-76 290.0 314 51.3
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 2.1e-76 290.0 316 53.5
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 1.1e-75 287.7 317 53.3
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.4e-75 287.3 314 53.2
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 3.1e-75 286.2 324 50.3
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.2e-74 284.3 325 49.8
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 5.8e-74 282.0 320 52.2
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.9e-74 281.2 332 50.3
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 1.3e-73 280.8 370 48.1
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 2.2e-73 280.0 331 52.3
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.4e-72 277.3 314 50.6
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.9e-72 276.9 314 51.0
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 7.1e-72 275.0 317 51.4
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 9.2e-72 274.6 335 48.4
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 1.6e-71 273.9 322 51.2
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 7.8e-71 271.6 317 51.1
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 1.3e-70 270.8 316 50.6
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 1.3e-70 270.8 316 50.6
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 3.0e-70 269.6 328 49.7
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 2.5e-69 266.5 310 49.4
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 5.6e-69 265.4 320 48.1
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 1.2e-68 264.2 326 47.2
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 2.8e-68 263.1 314 49.0
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 3.6e-68 262.7 339 48.4
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.9e-65 253.1 319 49.8
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.1e-64 251.1 182 66.5
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 1.6e-63 247.3 152 75.0
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 2.3e-62 243.4 415 41.0
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 6.2e-60 235.3 324 45.1
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 2.4e-59 233.4 324 44.8
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 7.1e-56 221.9 316 41.1
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 3.5e-55 219.5 329 42.2
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 7.4e-45 185.3 260 44.6
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 3.1e-43 179.9 316 38.3
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 1.5e-42 177.6 322 39.1
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 1.0e-41 174.9 179 53.1
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 1.6e-39 167.5 162 53.1
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.0e-38 164.9 317 38.8
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 3.0e-38 163.3 184 48.4
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 1.9e-32 144.1 280 36.4
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 7.2e-32 142.1 278 37.1
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 5.7e-29 132.5 348 30.7
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 1.3e-28 131.3 137 48.2
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 8.2e-28 128.6 264 37.9
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 6.9e-27 125.6 128 46.9
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 1.0e-25 121.7 138 44.9
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 5.0e-25 119.4 135 52.6
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 3.3e-21 106.7 229 35.8
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 9.7e-21 105.1 181 42.0
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.8e-20 102.8 229 35.4
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 5.3e-19 99.4 57 68.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 2.6e-18 97.1 57 66.7
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 6.1e-07 59.3 40 67.5
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 8.0e-07 58.9 121 38.0


User provided reference genes

Program Settings