Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 3.7e-169 598.2 315 100.0
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.4e-123 446.8 330 74.8
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.2e-117 425.6 330 72.1
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 4.4e-106 388.7 328 62.2
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 7.5e-106 387.9 327 64.8
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.1e-104 384.0 330 68.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 5.9e-103 378.3 369 56.6
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 2.3e-102 376.3 326 61.0
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 3.9e-102 375.6 327 61.5
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.1e-99 367.5 328 60.4
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.1e-93 347.4 321 62.3
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 2.3e-91 339.7 330 53.6
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.1e-91 339.3 328 54.6
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 8.9e-91 337.8 328 52.4
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 2.4e-88 329.7 328 51.8
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 3.2e-88 329.3 329 52.6
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.6e-87 327.0 329 53.5
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.7e-86 323.6 315 54.0
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.1e-85 320.9 326 51.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.5e-85 320.5 326 51.5
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 4.3e-85 318.9 330 52.4
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.6e-84 317.0 330 51.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.6e-84 315.8 329 51.7
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 6.2e-84 315.1 340 50.3
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 6.2e-84 315.1 323 51.4
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.4e-83 313.9 328 50.6
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 6.8e-83 311.6 329 50.2
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.2e-82 310.8 330 50.9
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 1.2e-82 310.8 333 48.3
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.5e-82 310.5 326 50.6
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 1.5e-82 310.5 328 50.0
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 2.6e-82 309.7 327 49.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 9.9e-82 307.8 343 49.3
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.7e-81 307.0 325 50.5
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.1e-80 304.3 328 49.7
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.9e-80 303.5 328 50.0
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.6e-79 298.9 337 49.9
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 6.0e-79 298.5 329 48.0
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.3e-78 296.6 318 48.4
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.1e-77 294.3 267 54.3
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 3.3e-77 292.7 330 46.4
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 5.6e-77 292.0 328 47.3
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 9.6e-77 291.2 331 46.5
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.7e-76 288.9 330 46.7
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 8.1e-76 288.1 267 56.6
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 9.0e-75 284.6 329 45.9
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.7e-73 280.4 322 46.6
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 6.4e-73 278.5 330 47.3
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 5.4e-72 275.4 335 44.8
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 3.0e-70 269.6 355 43.1
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 5.1e-70 268.9 326 46.6
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 5.1e-70 268.9 299 48.8
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 6.6e-70 268.5 327 44.3
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 8.7e-70 268.1 326 46.6
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.1e-69 267.7 315 47.3
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.1e-69 267.7 325 48.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.9e-69 266.9 327 44.0
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.9e-69 266.9 326 46.6
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.5e-69 266.5 332 45.8
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 5.6e-69 265.4 322 48.8
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 1.3e-68 264.2 327 46.5
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.6e-68 262.7 325 44.9
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 4.8e-68 262.3 388 41.0
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 8.1e-68 261.5 325 46.5
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 8.1e-68 261.5 334 44.3
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.2e-66 257.7 318 45.3
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 3.8e-65 252.7 376 39.1
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 6.4e-65 251.9 272 49.6
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.1e-64 251.1 334 43.7
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.4e-64 250.8 329 42.9
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 7.1e-64 248.4 315 45.7
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 2.1e-63 246.9 327 44.6
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 7.9e-63 245.0 366 41.5
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-62 244.2 328 43.6
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 3.9e-62 242.7 266 47.7
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.6e-60 237.3 330 42.1
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 6.2e-60 235.3 377 41.4
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 8.1e-60 235.0 385 38.2
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 2.4e-59 233.4 329 43.8
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 4.5e-58 229.2 282 44.3
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 9.9e-58 228.0 335 40.3
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 6.4e-57 225.3 327 40.4
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.9e-56 223.8 324 39.5
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 2.7e-55 219.9 274 43.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 2.3e-54 216.9 231 47.2
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.5e-53 214.2 279 41.6
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.3e-53 213.0 328 40.5
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 4.3e-53 212.6 326 42.9
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 5.6e-53 212.2 327 41.3
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.8e-52 209.1 356 38.5
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.4e-50 203.0 330 39.1
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.2e-47 194.5 281 42.3
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.2e-44 183.7 204 44.6
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 2.0e-42 177.2 197 47.2
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 3.4e-42 176.4 339 30.7
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 3.2e-40 169.9 201 45.8
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 1.8e-38 164.1 197 45.7
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.9e-37 160.6 125 62.4
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.3e-37 159.8 199 46.2
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 4.1e-35 152.9 326 33.1
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 8.5e-33 145.2 162 50.0
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.1e-32 144.8 170 41.8
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.4e-27 127.9 313 29.7
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 2.2e-25 120.6 134 48.5
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.4e-21 106.3 67 74.6
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-15 86.7 311 24.8
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 4.7e-15 86.3 67 62.7
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.7e-09 67.8 39 76.9


User provided reference genes

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