Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20408_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.7e-49 198.4 99 100.0
Ca_20010_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-46 189.5 98 96.9
Ca_20284_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.0e-45 186.4 98 96.9
Ca_25466_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-43 178.3 100 92.0
Ca_27850_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.3e-43 177.2 102 88.2
Ca_02050_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.0e-40 167.5 88 95.5
Ca_11614_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-39 166.4 87 95.4
Ca_05211_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.2e-39 164.9 85 97.6
Ca_11567_v3 Cicer arietinum L. HOM05D001588 ORTHO05D002975 1.8e-37 159.1 85 92.9
Ca_14566_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-37 159.1 87 94.3
Ca_03246_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.8e-37 157.1 90 86.7
Ca_20652_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.8e-37 156.8 93 87.1
Ca_26363_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-35 152.9 89 88.8
Ca_04609_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.7e-35 152.5 79 97.5
Ca_14914_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.0e-34 147.1 81 91.4
Ca_26547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-31 138.7 73 94.5
Ca_05165_v3 Cicer arietinum L. HOM05D000130 ORTHO05D000001 3.0e-29 131.7 69 94.2
Ca_14017_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.2e-29 131.0 65 98.5
Ca_12465_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001172 1.2e-28 129.8 67 95.5
Ca_06193_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-28 128.6 65 96.9
Ca_17825_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-28 128.6 65 96.9
Ca_23427_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-28 128.6 65 96.9
Ca_09776_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-28 128.3 65 96.9
Ca_04835_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.7e-28 127.5 65 95.4
Ca_26885_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.5e-28 127.1 64 96.9
Ca_05886_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.7e-27 124.8 68 89.7
Ca_09777_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.7e-27 124.8 65 93.8
Ca_22465_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-26 122.1 65 93.8
Ca_26751_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-26 121.3 72 87.5
Ca_13642_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-25 118.2 65 90.8
Ca_23974_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-24 115.2 59 94.9
Ca_06740_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-23 112.5 65 87.7
Ca_19470_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-21 106.3 53 94.3
Ca_23915_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-21 105.9 53 94.3
Ca_24174_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.0e-21 104.8 54 94.4
Ca_25793_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.8e-20 100.9 55 89.1
Ca_21693_v3 Cicer arietinum L. HOM05D002549 ORTHO05D000001 7.5e-20 100.5 52 92.3
Sed0016124 Sechium edule HOM05D000002 ORTHO05D000001 9.2e-18 93.6 91 56.0
Sed0025098 Sechium edule HOM05D000002 ORTHO05D000001 6.0e-17 90.9 91 53.8
Sed0026074 Sechium edule HOM05D000002 ORTHO05D000001 2.3e-16 89.0 91 52.7
Ca_21948_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-16 88.6 45 93.3
Sed0006786 Sechium edule HOM05D000002 ORTHO05D000001 3.9e-16 88.2 91 51.6
Sed0002910 Sechium edule HOM05D000002 ORTHO05D000001 6.6e-16 87.4 91 51.6
Sed0025010 Sechium edule HOM05D000002 ORTHO05D000001 6.6e-16 87.4 91 51.6
Sed0003254 Sechium edule HOM05D000002 ORTHO05D000001 5.6e-15 84.3 91 51.6
CAN.G514.8 Capsicum annuum HOM05D000002 ORTHO05D000001 1.6e-14 82.8 78 56.4
Atru.chr3.3068 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-14 80.9 84 50.0
Atru.chr10.707 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-13 80.1 82 51.2
CAN.G313.13 Capsicum annuum HOM05D000092 ORTHO05D000001 1.8e-13 79.3 83 51.8
Ciclev10003098m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.1e-13 78.6 67 59.7
CAN.G1473.16 Capsicum annuum HOM05D000002 ORTHO05D000001 5.2e-13 77.8 78 53.8
Atru.chr2.3876 Acer truncatum HOM05D000015 ORTHO05D009751 1.5e-12 76.3 99 41.4
Atru.chr2.917 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-12 75.9 82 48.8
Medtr7g017120 Medicago truncatula HOM05D000007 ORTHO05D000039 9.9e-12 73.6 38 89.5
Medtr7g017150 Medicago truncatula HOM05D000007 ORTHO05D000039 9.9e-12 73.6 38 89.5
Medtr3g007450 Medicago truncatula HOM05D000002 ORTHO05D000001 1.3e-11 73.2 50 72.0
TAR416G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.9e-11 72.0 70 51.4
Atru.chr4.123 Acer truncatum HOM05D000002 ORTHO05D000001 8.3e-11 70.5 84 47.6
TAR540G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-10 69.3 63 54.0
FvH4_5g20321 Fragaria vesca HOM05D000002 ORTHO05D000001 2.4e-10 68.9 62 45.2
Ca_13968_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.4e-10 67.8 33 97.0
Lalb_Chr04g0254181 Lupinus albus HOM05D000002 ORTHO05D000001 5.4e-10 67.8 61 54.1
Lalb_Chr13g0294661 Lupinus albus HOM05D000002 ORTHO05D000001 5.4e-10 67.8 61 52.5
RcHm_v2.0_Chr3g0448581 Rosa chinensis HOM05D000015 ORTHO05D000734 9.2e-10 67.0 71 47.9
SEGI_30649 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-09 66.2 61 47.5
RcHm_v2.0_Chr2g0143411 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-09 65.9 68 48.5
Hund14585 Selenicereus undatus HOM05D000002 ORTHO05D000001 2.1e-09 65.9 81 43.2
Sopen10g022510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-09 65.5 64 48.4
Sopen10g023500 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-09 65.5 64 48.4
Lalb_Chr08g0237561 Lupinus albus HOM05D000002 ORTHO05D000001 3.5e-09 65.1 61 50.8
Sopen04g031680 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-09 64.3 64 46.9
Sopen10g024360 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-09 64.3 64 48.4
Sopen06g011320 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-09 63.9 71 43.7
Sopen06g022150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-09 63.9 71 43.7
Sopen01g007390 Solanum pennellii HOM05D000004 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen01g028280 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen02g014940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen02g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen04g006060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen04g027340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen05g028580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen06g003350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen06g004200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen06g004530 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen06g015850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen06g024630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen08g004660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen09g006820 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen09g007410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen09g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen09g011980 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen09g032750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen11g019960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen12g004240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
Sopen12g019380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 46.9
CSS0013274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 62.8 58 43.1
Sopen01g011330 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 62.8 64 46.9
Sopen06g032140 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 62.8 64 46.9
Ah.02g115210 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.0e-08 62.0 63 42.9
Sopen01g028760 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-08 62.0 64 45.3
Sopen03g023600 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-08 62.0 64 45.3
MD03G1286700 Malus domestica HOM05D000002 ORTHO05D000001 3.9e-08 61.6 58 50.0
Sopen05g019080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-08 61.6 64 45.3
Sopen03g009200 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-08 61.2 62 46.8
Sopen11g018860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-08 61.2 62 46.8
Gorai.008G089200 Gossypium raimondii HOM05D000002 ORTHO05D000001 6.6e-08 60.8 59 47.5
Sopen01g028950 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-08 60.8 64 45.3
CiPaw.15G040700 Carya illinoinensis HOM05D000002 ORTHO05D000001 8.6e-08 60.5 58 46.6
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.6e-08 60.5 81 40.7
Sopen10g024060 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-08 60.5 64 45.3
Sopen10g024120 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-08 60.5 64 45.3
MD15G1021000 Malus domestica HOM05D000247 ORTHO05D000288 1.1e-07 60.1 58 50.0
Sopen12g019360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.1 64 45.3
CiPaw.01G146300 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.5e-07 59.7 58 50.0
Sopen06g016770 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.7 64 45.3
Sopen08g020030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.7 64 45.3
Sopen12g025240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.7 64 45.3
Hund26541 Selenicereus undatus HOM05D009055 ORTHO05D000001 1.9e-07 59.3 81 39.5
FvH4_4g14601 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-07 58.9 58 44.8
Ah.03g147360 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.3e-07 58.2 63 39.7
Ah.03g137130 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
Ah.06g183900 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
Ah.08g211310 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
Ah.11g043910 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
Ah.12g055400 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
Ah.13g069460 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.6e-07 57.8 63 44.4
TAR470G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.6e-07 57.8 69 40.6
TAR588G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.6e-07 57.8 66 40.9
CSS0016288 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-07 57.4 58 39.7
Solyc05g053320.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.3e-07 57.4 62 45.2
Sopen05g031830 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 62 45.2
TPR.G18411 Trifolium pratense HOM05D000002 ORTHO05D000001 7.3e-07 57.4 61 45.9
Sopen09g006870 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 64 45.3
CiPaw.07G236500 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 58 44.8
Thhalv10000703m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 1.2e-06 56.6 65 40.0
Hund05808 Selenicereus undatus HOM05D000002 ORTHO05D000001 1.2e-06 56.6 80 37.5
AUR62037585 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-06 56.2 63 42.9
Ah.11g049490 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.1e-06 55.8 63 42.9
CAN.G1271.17 Capsicum annuum HOM05D005472 ORTHO05D005897 2.1e-06 55.8 62 41.9
TAR491G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-06 55.8 61 41.0
FvH4_4g33602 Fragaria vesca HOM05D000002 ORTHO05D000001 2.8e-06 55.5 58 43.1
FvH4_5g07492 Fragaria vesca HOM05D000002 ORTHO05D000001 2.8e-06 55.5 58 43.1
FvH4_6g43142 Fragaria vesca HOM05D000002 ORTHO05D000001 2.8e-06 55.5 58 41.4
Hund08946 Selenicereus undatus HOM05D041011 ORTHO05D000001 2.8e-06 55.5 52 51.9
Ah.10g036840 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.6e-06 55.1 63 42.9
FvH4_4g20921 Fragaria vesca HOM05D000002 ORTHO05D000001 3.6e-06 55.1 57 45.6
Sopen08g017400 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 62 43.5
Thhalv10000715m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 4.7e-06 54.7 66 39.4
MBI10_g31698_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 4.7e-06 54.7 92 32.6
SHI35369 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 62 50.0
Sopen10g012230 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-06 54.7 64 43.8
CiPaw.01G068000 Carya illinoinensis HOM05D000002 ORTHO05D000001 6.2e-06 54.3 58 41.4
TAR451G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.2e-06 54.3 61 39.3
FvH4_3g08580 Fragaria vesca HOM05D000002 ORTHO05D000001 8.1e-06 53.9 62 40.3
MBI12_g40662_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 8.1e-06 53.9 58 43.1
TAR710G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.1e-06 53.9 58 41.4


User provided reference genes

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