Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19783_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.4e-127 458.4 236 100.0
Ca_27944_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-91 340.5 239 78.7
Ca_27138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.3e-88 328.2 235 76.2
Ca_19963_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 5.0e-86 321.6 278 66.2
Ca_26291_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.5e-79 298.5 235 70.2
Ca_09584_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-78 296.6 235 71.5
Ca_23929_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.4e-75 287.0 237 69.2
Ca_27011_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.5e-74 283.5 208 73.1
Ca_26894_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.3e-74 282.3 235 67.7
Ca_26647_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 6.3e-73 278.1 207 75.4
Ca_23985_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.5e-70 267.7 207 72.5
Ca_04650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.9e-69 266.5 228 66.2
Ca_27251_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.3e-67 259.6 266 59.8
Ca_11934_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.7e-67 258.1 224 64.7
Ca_14687_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.7e-66 255.0 215 67.9
Ca_11480_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.7e-63 244.6 284 53.5
Ca_05093_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-62 244.2 229 62.0
Ca_07325_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 4.7e-60 235.3 274 53.6
Ca_23984_v3 Cicer arietinum L. HOM05D001980 ORTHO05D000016 1.0e-59 234.2 264 56.1
Ca_19616_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.9e-55 218.4 269 50.9
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.8e-54 215.7 127 87.4
Ca_06635_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.1e-53 214.2 223 57.0
Ca_19559_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.5e-53 213.8 223 58.3
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.6e-52 209.1 225 59.1
Ca_23063_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.5e-50 201.4 213 56.8
Ca_19853_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.8e-50 201.1 262 51.5
Ca_26232_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-49 200.3 193 64.2
Ca_27783_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.8e-49 198.7 223 56.1
Ca_07471_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000016 1.1e-48 197.6 269 49.1
Ca_30733_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.4e-48 196.4 235 51.5
Ca_26731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 1.8e-43 180.3 110 84.5
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.3e-43 179.9 255 46.7
Ca_22785_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.1e-40 167.9 225 47.6
Ca_11645_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 5.9e-39 165.2 215 50.2
Ca_03067_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.7e-39 164.9 311 41.2
TPR.G17328 Trifolium pratense HOM05D000014 ORTHO05D000016 1.7e-38 163.7 147 62.6
Ca_26651_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.3e-38 163.3 223 48.4
Ca_19729_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.2e-35 152.1 235 46.0
Ca_06731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.2e-34 151.0 235 46.0
TPR.G31962 Trifolium pratense HOM05D000014 ORTHO05D000016 1.3e-33 147.5 330 38.2
TPR.G770 Trifolium pratense HOM05D000014 ORTHO05D000016 5.0e-30 135.6 146 56.2
TPR.G24565 Trifolium pratense HOM05D000014 ORTHO05D000016 6.6e-30 135.2 145 55.9
Ca_03908_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.2e-27 125.6 79 78.5
Ca_13853_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.3e-25 118.2 75 82.7
VMungo0720G1022 Vigna mungo HOM05D000014 ORTHO05D000016 2.4e-24 116.7 153 47.1
TPR.G23039 Trifolium pratense HOM05D000014 ORTHO05D009530 1.6e-23 114.0 119 57.1
Ca_19712_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.7e-23 113.2 75 80.0
Ca_26849_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.5e-23 112.8 75 78.7
Ca_03809_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.3e-22 110.2 134 50.7
TPR.G30974 Trifolium pratense HOM05D000014 ORTHO05D000016 2.3e-22 110.2 104 61.5
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.0e-22 109.0 224 37.5
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 102.4 283 33.6
Ca_23501_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.0e-18 97.1 213 37.1
Oeu009438.1 Olea europaea HOM05D008689 ORTHO05D009530 2.0e-18 97.1 141 45.4
TWI23G1233 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 5.8e-18 95.5 133 44.4
Ca_26009_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 9.8e-18 94.7 57 77.2
TWI23G0302 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.9e-17 93.2 133 43.6
Oeu020307.1 Olea europaea HOM05D000014 ORTHO05D000016 4.9e-17 92.4 104 51.9
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 8.3e-17 91.7 171 38.0
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.1e-16 91.3 133 42.1
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-16 89.7 326 31.0
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-16 89.7 326 31.0
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-16 89.7 326 31.0
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-16 89.7 326 31.0
Oeu038457.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-16 89.4 140 45.7
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 4.1e-16 89.4 326 31.0
VMungo0540G0970 Vigna mungo HOM05D001400 ORTHO05D001795 5.4e-16 89.0 140 42.9
TPR.G40343 Trifolium pratense HOM05D008689 ORTHO05D009530 7.1e-16 88.6 99 54.5
Ca_26732_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 9.2e-16 88.2 51 90.2
Oeu041515.1 Olea europaea HOM05D008689 ORTHO05D009530 3.5e-15 86.3 135 44.4
SGA_v2.0_scaffold162G37885 Striga asiatica HOM05D000014 ORTHO05D000016 6.0e-15 85.5 139 43.2
SGA_v2.0_scaffold279G46771 Striga asiatica HOM05D000014 ORTHO05D000016 1.0e-14 84.7 139 43.2
AUR62031361 Chenopodium quinoa HOM05D000014 ORTHO05D000016 3.0e-14 83.2 108 42.6
Ca_22560_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 8.6e-14 81.6 51 80.4
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 1.1e-13 81.3 144 35.4
Ah.01g016530 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.5e-13 80.9 104 41.3
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 2.5e-13 80.1 144 35.4
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 3.3e-13 79.7 325 25.5
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 3.3e-13 79.7 201 30.3
Gohir.D09G044366 Gossypium hirsutum HOM05D000014 ORTHO05D000016 7.3e-13 78.6 138 41.3
Oeu018771.1 Olea europaea HOM05D000014 ORTHO05D000016 1.6e-12 77.4 103 44.7
AUR62041646 Chenopodium quinoa HOM05D008689 ORTHO05D009530 2.1e-12 77.0 137 40.9
Ca_07145_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-12 77.0 51 76.5
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 2.1e-12 77.0 316 27.2
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 2.8e-12 76.6 144 36.8
AUR62024034 Chenopodium quinoa HOM05D000014 ORTHO05D000016 8.1e-12 75.1 145 36.6
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 1.1e-11 74.7 324 25.6
Oeu011846.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-11 73.6 100 48.0
Oeu055008.1 Olea europaea HOM05D000014 ORTHO05D000016 3.1e-11 73.2 103 43.7
Hund08079 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.0e-11 72.8 103 43.7
Oeu017734.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-10 71.2 103 45.6
Oeu007923.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-10 70.5 159 35.8
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 2.6e-10 70.1 140 36.4
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 2.6e-10 70.1 144 35.4
FvH4_1g29771 Fragaria vesca HOM05D000014 ORTHO05D000016 5.8e-10 68.9 139 33.8
Ah.05g176490 Amaranthus hybridus HOM05D000014 ORTHO05D000016 7.6e-10 68.6 137 35.8
FvH4_1g29494 Fragaria vesca HOM05D000014 ORTHO05D000093 7.6e-10 68.6 140 33.6
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 7.6e-10 68.6 319 25.7
CANSAT78G2096 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-09 67.8 254 28.7
Oeu048386.1 Olea europaea HOM05D008689 ORTHO05D009530 2.9e-09 66.6 113 42.5
PSO170G1926 Papaver somniferum HOM05D000014 ORTHO05D000016 3.7e-09 66.2 118 39.0
PSO541G6078 Papaver somniferum HOM05D000014 ORTHO05D000016 4.9e-09 65.9 265 27.2
AUR62029875 Chenopodium quinoa HOM05D000014 ORTHO05D000016 6.4e-09 65.5 105 37.1
Ca_28228_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 6.4e-09 65.5 40 85.0
PSO063G5685 Papaver somniferum HOM05D000014 ORTHO05D000016 1.9e-08 63.9 138 37.7
Oeu036301.1 Olea europaea HOM05D008689 ORTHO05D009530 2.4e-08 63.5 111 41.4
PSO675G2041 Papaver somniferum HOM05D000014 ORTHO05D000016 2.4e-08 63.5 72 48.6
VMungo0251G3239 Vigna mungo HOM05D020512 ORTHO05D021032 2.4e-08 63.5 147 35.4
PSO210G1244 Papaver somniferum HOM05D000014 ORTHO05D000016 3.2e-08 63.2 119 37.8
FvH4_3g26316 Fragaria vesca HOM05D000014 ORTHO05D000016 4.1e-08 62.8 137 32.1
PSO063G2020 Papaver somniferum HOM05D000014 ORTHO05D000016 5.4e-08 62.4 118 35.6
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 9.2e-08 61.6 137 32.1
Oeu055879.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-08 61.6 80 47.5
Oeu062459.1 Olea europaea HOM05D008689 ORTHO05D009530 1.2e-07 61.2 77 48.1
PSO017G3915 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-07 61.2 118 37.3
PSO017G2550 Papaver somniferum HOM05D000014 ORTHO05D000016 1.6e-07 60.8 75 44.0
HanXRQChr05g0135921 Helianthus annuus HOM05D000014 ORTHO05D000016 2.1e-07 60.5 107 37.4
PSO674G0101 Papaver somniferum HOM05D000014 ORTHO05D000016 2.7e-07 60.1 136 35.3
VMungo0331G0891 Vigna mungo HOM05D000014 ORTHO05D011906 2.7e-07 60.1 75 40.0
Oeu027559.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-07 59.7 80 43.8
FvH4_3g21342 Fragaria vesca HOM05D000014 ORTHO05D000016 4.6e-07 59.3 101 37.6
PSO674G0086 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-07 58.9 74 43.2
PSO764G0254 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-07 58.9 75 44.0
Ca_05333_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-06 58.2 32 90.6
MD02G1206700 Malus domestica HOM05D000014 ORTHO05D000016 1.0e-06 58.2 143 32.2
Gohir.A11G290400 Gossypium hirsutum HOM05D000011 ORTHO05D000018 1.3e-06 57.8 97 37.1
PSO017G7079 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-06 57.8 312 25.0
PSO170G2292 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-06 57.4 74 43.2
TPR.G29200 Trifolium pratense HOM05D000014 ORTHO05D000016 1.7e-06 57.4 57 50.9
FvH4_4g05352 Fragaria vesca HOM05D000014 ORTHO05D000016 2.3e-06 57.0 106 34.0
PSO761G0191 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-06 57.0 70 44.3
PSO832G3598 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-06 57.0 296 24.0
Oeu023981.1 Olea europaea HOM05D000014 ORTHO05D000016 3.0e-06 56.6 71 49.3
PSO063G4722 Papaver somniferum HOM05D000014 ORTHO05D000016 3.0e-06 56.6 118 33.1
CsaV3_6G021800 Cucumis sativus L. HOM05D000014 ORTHO05D000016 3.9e-06 56.2 137 31.4
PSO782G2952 Papaver somniferum HOM05D000014 ORTHO05D000016 3.9e-06 56.2 137 31.4
FvH4_1g27931 Fragaria vesca HOM05D000014 ORTHO05D000016 5.1e-06 55.8 101 36.6
FvH4_1g27951 Fragaria vesca HOM05D000014 ORTHO05D000016 5.1e-06 55.8 101 36.6
FvH4_4g10092 Fragaria vesca HOM05D000014 ORTHO05D000016 5.1e-06 55.8 101 36.6
FvH4_4g17204 Fragaria vesca HOM05D000014 ORTHO05D000016 5.1e-06 55.8 101 36.6
FvH4_7g25273 Fragaria vesca HOM05D000014 ORTHO05D000016 5.1e-06 55.8 101 36.6
PSO782G5624 Papaver somniferum HOM05D000014 ORTHO05D000016 5.1e-06 55.8 75 44.0
Oeu003929.1 Olea europaea HOM05D000014 ORTHO05D000016 8.6e-06 55.1 80 45.0
VMungo0720G2710 Vigna mungo HOM05D000014 ORTHO05D000016 8.6e-06 55.1 46 63.0
VMungo1127G0225 Vigna mungo HOM05D000014 ORTHO05D000093 8.6e-06 55.1 46 63.0


User provided reference genes

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