Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 8.2e-137 490.3 241 100.0
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.3e-110 403.3 245 81.6
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 3.6e-108 395.2 244 80.3
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.2e-100 370.2 245 75.9
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 7.0e-96 354.4 248 74.6
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.1e-93 347.1 246 72.8
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 1.9e-93 346.3 241 73.9
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 2.8e-92 342.4 241 72.6
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 6.0e-87 324.7 264 64.4
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 6.0e-87 324.7 264 64.4
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 5.1e-86 321.6 183 86.3
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 5.1e-86 321.6 254 68.9
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 6.6e-86 321.2 248 67.7
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 3.3e-85 318.9 249 68.3
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 9.5e-85 317.4 248 66.1
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 2.1e-84 316.2 242 70.2
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 8.1e-84 314.3 245 65.7
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.1e-83 313.9 247 66.4
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.1e-83 313.9 246 66.7
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.8e-83 313.2 257 66.5
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.3e-83 312.8 184 83.2
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.2e-82 310.5 246 65.9
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 1.3e-81 307.0 247 67.6
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.7e-81 306.6 183 82.0
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.9e-81 305.8 182 81.3
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 3.7e-81 305.4 172 83.7
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 8.4e-81 304.3 236 67.8
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.1e-80 303.9 187 79.7
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.9e-80 303.1 201 77.1
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.2e-80 302.4 247 65.2
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 5.4e-80 301.6 229 69.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 7.1e-80 301.2 236 68.2
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 7.1e-80 301.2 242 66.5
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 7.1e-80 301.2 239 64.4
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 9.2e-80 300.8 182 81.9
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 9.2e-80 300.8 231 69.3
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.1e-79 299.7 240 65.8
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.7e-79 299.3 238 67.6
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.7e-79 299.3 238 67.6
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 6.0e-79 298.1 233 67.8
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 7.8e-79 297.7 187 78.6
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.0e-78 297.4 182 80.2
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.0e-78 295.8 251 64.9
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.9e-78 295.4 251 64.9
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 5.1e-78 295.0 165 84.2
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.1e-77 293.9 268 61.6
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 1.5e-77 293.5 168 80.4
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 1.5e-77 293.5 228 65.8
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.9e-77 293.1 235 66.8
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.3e-77 292.0 192 76.6
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 4.3e-77 292.0 224 67.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.1e-76 289.7 176 80.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.6e-76 288.9 174 81.0
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.8e-75 286.6 181 76.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.8e-75 286.6 225 68.9
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 5.2e-75 285.0 171 81.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 5.2e-75 285.0 244 62.7
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.2e-74 283.9 183 77.0
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 4.4e-74 282.0 174 79.3
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 9.9e-74 280.8 166 80.7
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 3.8e-73 278.9 222 66.2
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.9e-73 278.5 162 81.5
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 8.4e-73 277.7 206 68.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.1e-72 277.3 231 61.9
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.1e-72 277.3 219 67.1
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.4e-72 276.9 226 64.6
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.4e-72 276.9 226 64.6
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.4e-72 276.9 226 64.6
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.9e-72 276.6 231 61.9
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.9e-72 276.6 244 59.8
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 2.4e-72 276.2 222 64.9
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.4e-72 276.2 176 75.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 4.2e-72 275.4 206 66.0
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.2e-71 273.9 208 67.8
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.1e-71 273.1 238 60.9
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 2.7e-71 272.7 235 59.1
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.5e-71 272.3 181 73.5
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 4.6e-71 271.9 223 62.3
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 6.0e-71 271.6 223 64.6
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 7.8e-71 271.2 232 62.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 2.3e-70 269.6 168 74.4
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 2.3e-70 269.6 225 60.9
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.0e-70 269.2 228 61.8
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 3.0e-70 269.2 217 64.1
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 3.9e-70 268.9 235 60.9
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.5e-69 266.9 264 55.3
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.5e-69 266.9 161 78.9
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 4.3e-69 265.4 175 71.4
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.9e-65 252.7 145 83.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.2e-63 247.3 186 69.4
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.0e-62 244.2 179 66.5
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.9e-62 242.3 179 68.2
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 4.5e-58 228.8 164 62.8
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 2.2e-57 226.5 212 59.9
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 3.8e-57 225.7 175 62.9
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.9e-57 225.3 169 65.1
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 7.1e-56 221.5 193 60.6
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.0e-54 216.1 235 53.2
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.3e-52 210.7 196 62.8
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 7.6e-50 201.4 131 71.8
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.6e-47 193.7 126 71.4
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 4.6e-47 192.2 117 79.5
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 6.7e-46 188.3 218 50.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.9e-45 186.8 114 78.1
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.6e-44 183.7 118 73.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.4e-43 179.9 114 75.4
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.9e-43 178.3 114 73.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 6.5e-41 171.8 108 81.5
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.9e-40 170.2 187 48.7
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.3e-38 164.1 177 48.0
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 8.7e-38 161.4 109 69.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 8.2e-36 154.8 110 72.7
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.2e-34 151.0 99 73.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 5.7e-21 105.5 162 38.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 6.5e-17 92.0 126 45.2
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-16 90.9 55 74.5
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.9e-16 90.5 187 30.5
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 3.3e-13 79.7 178 28.1
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 2.8e-12 76.6 170 28.8
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 7.7e-10 68.6 68 50.0
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 6.1e-07 58.9 59 55.9


User provided reference genes

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