Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 5.2e-64 247.7 134 100.0
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.5e-58 229.6 105 94.3
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 1.9e-58 229.2 105 93.3
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.5e-58 228.8 105 93.3
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 5.5e-58 227.6 105 91.4
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.0e-56 223.4 105 89.5
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 5.7e-55 217.6 105 86.7
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 2.2e-54 215.7 105 84.8
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.8e-54 215.3 105 84.8
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 5.4e-53 211.1 105 81.0
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.6e-52 209.5 105 80.0
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 3.5e-52 208.4 105 78.1
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 5.9e-52 207.6 105 80.0
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 5.9e-52 207.6 105 79.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 5.9e-52 207.6 105 78.1
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.7e-51 206.1 105 80.0
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 3.8e-51 204.9 105 77.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 5.0e-51 204.5 105 78.1
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 5.0e-51 204.5 105 77.1
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 5.0e-51 204.5 105 77.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.1e-50 203.4 105 77.1
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.5e-50 203.0 105 78.1
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.5e-50 203.0 104 76.9
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.9e-50 202.6 105 77.1
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-50 201.8 104 76.9
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 3.2e-50 201.8 105 77.1
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 5.5e-50 201.1 104 76.9
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 5.5e-50 201.1 104 76.9
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 5.5e-50 201.1 104 76.9
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 5.5e-50 201.1 104 76.9
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 5.5e-50 201.1 104 76.9
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.2e-50 200.7 105 76.2
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 9.4e-50 200.3 104 76.0
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 9.4e-50 200.3 104 76.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 9.4e-50 200.3 104 76.0
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 9.4e-50 200.3 104 76.0
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 9.4e-50 200.3 105 77.1
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.2e-49 199.9 105 77.1
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.1e-49 199.1 104 76.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 3.6e-49 198.4 105 74.3
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.1e-49 197.6 104 75.0
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.1e-49 197.6 104 75.0
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 6.1e-49 197.6 104 75.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.0e-48 196.8 105 75.2
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.8e-48 196.1 105 73.3
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.0e-48 195.3 105 72.4
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 3.0e-48 195.3 105 74.3
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 8.8e-48 193.7 105 73.3
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.2e-47 193.4 105 75.2
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.2e-47 193.4 105 72.4
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.5e-47 193.0 102 73.5
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.5e-47 193.0 102 75.5
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.0e-47 192.6 105 72.4
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.6e-47 192.2 104 73.1
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 4.4e-47 191.4 105 74.3
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 5.7e-47 191.0 104 71.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.7e-47 191.0 105 71.4
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.3e-46 189.9 104 72.1
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.3e-46 189.9 105 70.5
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.3e-46 189.9 105 70.5
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.7e-46 189.5 105 73.3
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 3.7e-46 188.3 129 62.0
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.7e-46 188.3 105 72.4
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.1e-45 186.8 123 66.7
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.1e-45 186.8 105 72.4
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 1.4e-45 186.4 104 70.2
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 2.4e-45 185.7 126 64.3
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.1e-45 185.3 104 70.2
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 5.4e-45 184.5 104 69.2
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 5.4e-45 184.5 102 70.6
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.6e-44 183.0 91 81.3
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.5e-44 181.8 105 66.7
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.9e-44 181.0 113 67.3
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 7.7e-44 180.6 105 73.3
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 7.7e-44 180.6 102 70.6
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.3e-43 179.9 104 67.3
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.3e-43 179.9 105 66.7
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.7e-43 179.5 105 66.7
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.3e-43 179.1 102 67.6
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.9e-43 178.7 101 72.3
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.9e-43 178.7 105 73.3
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.1e-42 176.8 101 69.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.9e-42 176.0 105 68.6
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.2e-42 174.9 106 65.1
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 7.2e-42 174.1 101 65.3
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 7.2e-42 174.1 105 62.9
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.6e-41 172.9 113 64.6
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 5.2e-40 167.9 109 59.6
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.5e-39 166.4 96 66.7
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-39 166.4 117 59.8
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.5e-39 166.4 134 53.0
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.5e-39 166.4 102 60.8
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 2.0e-39 166.0 145 51.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 3.4e-39 165.2 145 49.7
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 8.3e-38 160.6 78 83.3
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.8e-37 159.5 78 80.8
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 7.0e-37 157.5 79 81.0
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 9.2e-37 157.1 101 56.4
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.2e-37 157.1 102 61.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.2e-36 156.8 105 62.9
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 4.6e-36 154.8 89 70.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.8e-36 154.1 82 74.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 9.5e-34 147.1 90 71.1
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 2.1e-33 146.0 76 78.9
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.3e-32 142.5 83 69.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 4.4e-31 138.3 112 55.4
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 8.3e-30 134.0 79 65.8
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 8.1e-25 117.5 63 74.6
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 8.1e-25 117.5 61 77.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 8.1e-25 117.5 61 77.0
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 5.8e-23 111.3 61 75.4
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 9.8e-23 110.5 70 68.6
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.7e-22 109.8 61 73.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.9e-22 109.0 61 73.8
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.9e-21 106.3 61 70.5
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 3.2e-21 105.5 90 47.8
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 5.1e-19 98.2 61 65.6
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 6.2e-17 91.3 61 62.3
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 8.9e-16 87.4 55 63.6
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.5e-10 69.3 38 73.7


User provided reference genes

Program Settings