Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.9e-242 842.0 406 100.0
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 7.4e-207 723.8 488 76.6
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.2e-175 620.2 475 68.4
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.0e-164 582.8 474 64.6
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 6.0e-164 581.3 481 65.9
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 6.2e-153 544.7 401 68.8
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.5e-151 540.0 401 69.1
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.8e-150 535.4 402 67.9
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 7.1e-149 531.2 428 65.7
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.5e-146 523.5 482 60.0
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 6.9e-144 514.6 480 59.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 2.4e-125 453.0 398 58.5
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.1e-125 451.4 473 52.2
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.2e-124 450.7 473 52.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 3.2e-117 426.0 468 49.1
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.2e-117 425.6 406 55.9
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 7.1e-117 424.9 425 54.1
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 2.1e-116 423.3 408 56.6
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 2.7e-116 422.9 404 55.4
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.5e-116 422.5 399 55.4
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 3.0e-115 419.5 399 55.1
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 3.9e-115 419.1 401 56.4
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 4.3e-114 415.6 403 55.8
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 7.4e-114 414.8 471 48.0
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 9.7e-114 414.5 465 49.5
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.1e-112 411.0 404 54.2
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.1e-112 411.0 402 54.7
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.4e-112 409.8 404 54.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 9.0e-112 407.9 399 55.6
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.5e-111 407.1 402 54.5
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.0e-111 406.8 412 54.9
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 2.6e-111 406.4 402 54.7
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.4e-111 406.0 472 48.1
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.4e-111 406.0 404 53.7
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 6.5e-110 401.7 404 53.5
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.1e-109 401.0 401 55.4
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.9e-109 400.2 398 53.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 3.2e-109 399.4 398 53.5
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.2e-109 399.4 399 54.4
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 4.2e-109 399.1 404 53.2
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 5.5e-109 398.7 482 46.9
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 7.2e-109 398.3 415 53.3
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 9.4e-109 397.9 411 53.0
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 4.6e-108 395.6 421 52.0
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.4e-107 394.0 408 52.7
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.8e-107 393.7 404 52.7
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 3.0e-107 392.9 452 49.6
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 3.0e-107 392.9 395 53.2
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 3.0e-107 392.9 410 52.7
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 3.9e-107 392.5 408 50.5
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.9e-107 392.5 420 51.0
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.1e-106 391.0 401 51.1
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 2.5e-106 389.8 442 50.7
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 5.7e-106 388.7 414 50.5
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 5.7e-106 388.7 432 51.2
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 7.4e-106 388.3 416 49.5
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 9.7e-106 387.9 365 55.1
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.1e-104 384.4 405 50.4
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.8e-104 383.6 405 51.1
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.4e-104 383.3 400 53.0
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 9.1e-104 381.3 400 52.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.6e-103 379.8 404 50.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 4.5e-103 379.0 401 50.9
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 7.7e-103 378.3 416 50.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 2.9e-102 376.3 404 50.5
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 3.8e-102 375.9 369 53.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.1e-101 374.4 407 48.4
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.4e-101 374.0 391 52.7
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 4.2e-101 372.5 408 48.5
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 5.5e-101 372.1 407 48.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 9.4e-101 371.3 373 52.8
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.6e-100 370.5 380 52.4
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.7e-100 369.8 380 52.1
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.4e-99 367.5 349 55.0
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 6.7e-99 365.2 413 48.4
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 4.4e-98 362.5 382 51.8
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 1.3e-97 360.9 464 45.3
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.7e-97 360.5 397 48.1
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.4e-96 357.5 479 45.9
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.4e-96 356.7 439 45.8
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 1.2e-95 354.4 414 47.1
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 1.2e-95 354.4 414 47.1
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 2.6e-95 353.2 395 46.6
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.7e-94 350.5 397 47.9
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 6.5e-94 348.6 403 47.9
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 8.5e-94 348.2 406 48.0
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 7.2e-93 345.1 395 47.3
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 9.4e-93 344.7 438 45.7
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.2e-92 344.4 395 48.6
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 3.6e-92 342.8 406 46.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.8e-91 340.5 400 47.2
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.1e-90 337.8 397 47.6
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.6e-90 336.7 406 46.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.3e-90 336.3 429 45.2
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.3e-90 336.3 429 45.2
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 8.2e-89 331.6 391 47.3
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.8e-88 330.5 400 46.8
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 9.1e-88 328.2 407 47.2
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 3.8e-86 322.8 410 43.7
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.5e-85 320.9 227 68.7
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.8e-78 296.2 314 52.2
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 3.2e-77 293.1 226 62.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 2.2e-73 280.4 328 49.1
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 7.0e-72 275.4 464 36.9
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.3e-70 271.2 398 41.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.2e-68 264.6 455 38.0
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.4e-64 251.1 426 39.2
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 7.0e-64 248.8 393 38.2
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 7.8e-63 245.4 369 38.8
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.6e-60 237.7 290 47.6
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 3.9e-38 163.3 271 35.4
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 6.2e-36 156.0 233 42.9
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 2.9e-33 147.1 321 30.2
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.0e-26 124.4 73 75.3
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.0e-22 112.1 126 45.2
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.9e-21 107.8 281 28.5
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 2.7e-15 87.4 60 66.7
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.3e-13 80.1 85 51.8
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.0e-09 68.9 95 43.2
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.1e-08 65.5 117 36.8


User provided reference genes

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