Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.4e-219 764.6 368 100.0
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.4e-204 716.1 365 95.3
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.6e-200 702.6 364 90.9
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.0e-199 699.9 369 90.5
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 8.6e-194 680.2 369 88.1
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 3.2e-193 678.3 364 87.6
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 3.2e-193 678.3 364 87.6
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 7.2e-193 677.2 367 88.3
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 9.5e-193 676.8 369 87.8
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 5.7e-190 667.5 368 87.2
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 2.8e-189 665.2 367 85.6
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 4.9e-189 664.5 368 85.1
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.4e-188 662.9 364 85.4
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.1e-188 661.8 360 85.6
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 7.0e-188 660.6 370 86.8
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.6e-187 659.4 360 85.8
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 7.8e-187 657.1 358 85.8
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.7e-186 656.0 359 85.5
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 2.9e-186 655.2 359 85.0
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 3.8e-186 654.8 356 86.2
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.8e-186 654.8 365 85.2
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.0e-186 654.4 356 86.0
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 8.6e-186 653.7 358 84.6
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.5e-185 652.9 354 86.7
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 3.3e-185 651.7 359 84.1
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 7.3e-185 650.6 357 86.3
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.6e-184 649.4 364 83.8
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.8e-184 648.7 358 85.2
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 2.8e-184 648.7 358 85.2
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 8.0e-184 647.1 362 84.3
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-183 646.7 353 85.3
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.8e-183 646.0 359 83.6
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.8e-183 646.0 358 83.8
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 2.3e-183 645.6 358 83.8
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.0e-183 645.2 353 85.0
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.0e-183 645.2 358 83.8
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 5.2e-183 644.4 354 84.2
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 6.8e-183 644.0 368 84.0
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.8e-183 644.0 359 83.0
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 8.9e-183 643.7 365 83.6
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 8.9e-183 643.7 357 84.9
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 8.9e-183 643.7 365 83.3
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 8.9e-183 643.7 355 85.6
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.5e-182 642.9 358 84.1
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.5e-182 642.9 358 83.2
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.5e-182 642.9 360 82.5
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 5.7e-182 641.0 363 83.2
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 7.5e-182 640.6 360 83.6
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 9.8e-182 640.2 359 82.7
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.3e-181 639.8 356 84.0
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 1.3e-181 639.8 356 83.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 3.7e-181 638.3 362 82.0
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 6.4e-181 637.5 356 83.1
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 8.3e-181 637.1 365 82.5
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.1e-180 636.7 366 81.4
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.1e-180 636.7 383 79.6
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.8e-180 636.0 362 80.1
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.2e-180 635.2 358 82.7
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.1e-180 634.8 356 82.9
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 5.4e-180 634.4 358 83.5
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 5.4e-180 634.4 370 80.5
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.4e-180 634.4 358 82.7
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 7.0e-180 634.0 354 82.5
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 3.5e-179 631.7 366 81.7
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 4.6e-179 631.3 375 80.0
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 5.9e-179 630.9 356 84.3
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 5.9e-179 630.9 359 81.6
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.7e-178 629.4 369 79.9
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.7e-178 629.4 360 81.4
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 2.3e-178 629.0 360 81.7
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.1e-177 626.7 349 83.4
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.5e-177 626.3 354 82.2
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.5e-177 626.3 357 81.8
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.9e-177 625.9 353 83.0
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 4.3e-177 624.8 364 81.0
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 7.3e-177 624.0 373 79.9
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 9.5e-177 623.6 360 81.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 9.5e-177 623.6 358 81.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 9.5e-177 623.6 365 80.5
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.2e-176 623.2 364 80.8
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 6.2e-176 620.9 365 80.0
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.4e-175 619.8 354 81.4
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 3.1e-175 618.6 350 81.7
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 8.9e-175 617.1 362 78.7
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 2.6e-174 615.5 350 81.7
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 4.4e-174 614.8 366 80.6
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 7.5e-174 614.0 363 80.2
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 9.8e-174 613.6 384 76.6
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.3e-173 613.2 375 75.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 1.7e-173 612.8 354 80.2
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 3.2e-172 608.6 371 78.7
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.2e-172 608.6 366 78.1
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 7.0e-172 607.4 342 82.5
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.0e-170 603.6 369 78.0
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.9e-170 601.7 370 78.1
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.9e-169 599.4 378 75.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 3.3e-169 598.6 356 79.5
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.6e-169 597.8 368 77.4
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 8.1e-168 594.0 365 77.0
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 3.1e-167 592.0 382 74.3
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 4.0e-167 591.7 358 78.8
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.4e-166 588.6 362 76.5
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 7.5e-166 587.4 362 76.5
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 4.1e-164 581.6 351 76.1
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 9.2e-164 580.5 353 78.8
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 2.7e-163 578.9 357 74.8
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.5e-163 578.6 351 76.9
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 4.3e-161 571.6 359 76.3
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.2e-160 570.1 358 76.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.6e-160 569.7 359 76.6
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.9e-157 558.9 358 74.6
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.1e-156 554.3 358 74.9
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.2e-155 553.5 347 74.4
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.5e-155 552.0 350 72.6
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 7.8e-155 550.8 295 87.1
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.3e-154 550.1 354 75.4
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.9e-154 548.5 357 73.7
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 5.1e-154 548.1 351 71.5
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.6e-154 547.7 357 73.1
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 4.3e-153 545.0 356 70.5
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.6e-152 543.1 359 70.5
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.6e-152 543.1 371 70.9
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.0e-151 538.5 365 72.9
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 4.0e-151 538.5 430 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.8e-150 534.6 334 72.2
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.9e-146 521.9 279 86.7
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.3e-145 518.5 359 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.6e-142 509.2 367 65.7
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 7.4e-137 491.1 290 77.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.4e-134 482.3 362 65.5
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 2.9e-133 479.2 351 64.1
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 6.4e-133 478.0 348 64.1
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.2e-131 473.8 240 90.8
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 2.8e-128 462.6 334 62.9
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 4.0e-127 458.8 711 40.2
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.3e-125 453.8 310 68.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.1e-115 419.9 266 73.7
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 4.1e-111 405.6 348 56.0
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.9e-110 401.7 236 78.0
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 5.3e-103 378.6 339 59.3
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.1e-95 354.4 334 54.5
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 4.1e-95 352.4 216 75.5
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 9.1e-95 351.3 250 65.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.2e-85 320.1 289 58.8
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 8.5e-85 318.2 202 74.8
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.4e-50 204.5 142 70.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.6e-46 191.0 100 91.0
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 7.8e-46 188.7 126 74.6
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.0e-45 188.3 126 74.6
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 2.3e-45 187.2 125 75.2
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.1e-45 186.0 121 76.9
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 8.1e-43 178.7 125 71.2
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.0e-42 176.4 98 86.7
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.2e-42 176.0 171 52.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.2e-41 174.9 110 73.6
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 3.5e-38 163.3 131 62.6
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.1e-37 159.5 98 73.5
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 8.4e-32 142.1 123 60.2
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.1e-30 137.5 111 58.6
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.9e-24 117.1 67 80.6
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 3.8e-24 116.7 71 78.9
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 8.4e-24 115.5 67 82.1
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.1e-23 115.2 69 78.3
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 6.2e-19 99.4 71 64.8
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.5e-17 94.7 61 73.8
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 1.7e-16 91.3 84 56.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.1e-14 84.3 128 42.2
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.8e-13 81.3 49 71.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 2.1e-11 74.3 62 56.5
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 4.5e-09 66.6 46 67.4
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 3.2e-07 60.5 31 90.3


User provided reference genes

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