Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17843_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 0.0e+00 1126.7 540 100.0
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 0.0e+00 1084.7 539 97.2
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 9.6e-311 1069.3 539 95.4
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 6.2e-310 1066.6 538 94.6
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 1.2e-305 1052.4 539 93.1
Psat7g063600 Pisum sativum HOM05D002496 ORTHO05D002787 1.2e-305 1052.4 539 94.6
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 2.1e-305 1051.6 539 93.9
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 9.6e-303 1042.7 539 92.9
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 5.3e-301 1036.9 520 95.2
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 2.2e-299 1031.6 539 92.4
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 4.2e-298 1027.3 539 91.1
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 5.5e-298 1026.9 539 91.8
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 9.3e-298 1026.2 539 91.1
Hma1.2p1_0241F.1_g100580 Hydrangea macrophylla HOM05D002496 ORTHO05D002787 4.8e-294 1013.8 539 88.5
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 2.2e-291 1005.0 539 87.6
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 1.9e-290 1001.9 538 87.5
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 1.9e-290 1001.9 540 87.4
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 4.2e-290 1000.7 542 86.3
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 6.1e-289 996.9 539 85.7
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.8e-288 995.3 539 85.7
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.8e-288 995.3 539 85.7
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 2.3e-288 995.0 539 86.6
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 1.9e-287 991.9 539 85.5
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 4.3e-287 990.7 520 89.6
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 2.6e-284 981.5 521 88.5
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 3.4e-284 981.1 540 85.4
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 5.9e-284 980.3 520 88.3
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 7.7e-284 979.9 539 85.9
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 1.0e-283 979.5 521 87.7
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 2.9e-283 978.0 520 88.1
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 5.0e-283 977.2 520 88.1
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 1.1e-282 976.1 522 87.4
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 1.9e-282 975.3 521 87.5
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.9e-282 975.3 520 88.1
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 3.2e-282 974.5 521 87.5
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 3.2e-282 974.5 520 87.7
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 5.5e-282 973.8 522 86.8
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 5.5e-282 973.8 540 85.0
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 9.4e-282 973.0 520 87.7
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 9.4e-282 973.0 520 87.5
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 1.6e-281 972.2 522 87.4
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 2.1e-281 971.8 536 85.4
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 2.7e-281 971.5 539 84.8
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 2.7e-281 971.5 522 87.0
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 2.7e-281 971.5 536 85.4
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 3.6e-281 971.1 539 84.6
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 3.6e-281 971.1 521 87.1
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 4.6e-281 970.7 539 85.2
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 6.1e-281 970.3 521 87.5
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 6.1e-281 970.3 539 84.8
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 6.1e-281 970.3 534 84.1
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 7.9e-281 969.9 520 87.7
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 1.0e-280 969.5 539 84.8
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 1.0e-280 969.5 539 84.4
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 1.8e-280 968.8 522 87.2
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 1.8e-280 968.8 520 86.9
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 2.3e-280 968.4 539 84.2
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 3.9e-280 967.6 539 84.4
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 3.9e-280 967.6 521 86.4
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 6.7e-280 966.8 521 87.1
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 1.1e-279 966.1 521 87.3
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 1.1e-279 966.1 521 87.3
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 1.1e-279 966.1 520 87.1
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 1.1e-279 966.1 539 84.0
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 1.5e-279 965.7 521 86.6
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 3.3e-279 964.5 535 84.9
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 7.4e-279 963.4 521 87.1
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 7.4e-279 963.4 521 86.6
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 9.7e-279 963.0 539 84.2
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 9.7e-279 963.0 539 84.0
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 1.7e-278 962.2 520 85.8
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 1.7e-278 962.2 521 85.4
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 2.8e-278 961.4 539 84.2
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 2.8e-278 961.4 539 84.0
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 2.8e-278 961.4 539 84.0
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 3.7e-278 961.1 520 86.3
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 4.8e-278 960.7 508 88.0
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 6.3e-278 960.3 539 83.9
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 8.2e-278 959.9 539 83.9
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 1.4e-277 959.1 539 83.9
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 3.1e-277 958.0 520 85.6
BcaC08g43618 Brassica carinata HOM05D002496 ORTHO05D002787 4.1e-277 957.6 539 83.7
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 5.3e-277 957.2 523 85.5
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 1.2e-276 956.1 536 82.6
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.5e-276 955.7 539 83.5
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 1.5e-276 955.7 520 86.2
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 1.0e-275 953.0 522 85.4
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 8.5e-275 949.9 570 79.8
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 5.5e-274 947.2 539 82.6
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 2.7e-273 944.9 523 84.1
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 4.7e-273 944.1 521 85.8
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 3.0e-272 941.4 518 85.7
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 6.7e-272 940.3 522 84.3
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 8.8e-272 939.9 519 85.4
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 7.4e-271 936.8 521 85.4
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 6.3e-270 933.7 539 81.4
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 1.0e-267 926.4 539 82.4
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 1.0e-267 926.4 539 80.7
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 6.3e-262 907.1 520 81.5
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 1.1e-261 906.4 540 79.6
PGSC0003DMG400004280 Solanum tuberosum HOM05D002496 ORTHO05D002787 2.7e-260 901.7 476 88.2
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 4.5e-260 901.0 492 85.4
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 9.4e-258 893.3 482 86.1
CAN.G2119.1 Capsicum annuum HOM05D002496 ORTHO05D002787 1.5e-255 885.9 538 79.0
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 7.5e-247 857.1 540 75.6
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 7.5e-247 857.1 540 75.6
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 3.7e-246 854.7 540 74.4
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 9.5e-242 840.1 543 73.3
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 2.0e-239 832.4 505 79.0
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 1.4e-237 826.2 541 73.2
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 1.6e-236 822.8 544 71.5
CDE02G1358 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 3.7e-222 775.0 410 87.6
CAN.G1751.13 Capsicum annuum HOM05D002496 ORTHO05D002787 2.8e-201 705.7 398 83.7
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 3.8e-190 668.7 364 86.5
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.5e-183 646.7 359 84.7
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.5e-181 639.4 336 87.8
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 4.3e-178 628.6 342 86.5
FvH4_3g45670 Fragaria vesca HOM05D002496 ORTHO05D002787 2.6e-175 619.4 324 90.4
CBR_g23680 Chara braunii HOM05D002496 ORTHO05D002787 4.5e-175 618.6 457 63.0
FvH4_3g45640 Fragaria vesca HOM05D002496 ORTHO05D002787 3.8e-174 615.5 341 84.2
FAN11G2291 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.8e-160 570.1 388 71.4
CAN.G1669.10 Capsicum annuum HOM05D002496 ORTHO05D002787 2.1e-156 556.6 322 81.1
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 2.0e-130 470.3 520 50.2
FAN11G3798 Fragaria x ananassa HOM05D002496 ORTHO05D002787 8.6e-126 454.9 225 92.0
FAN25G1480 Fragaria x ananassa HOM05D002496 ORTHO05D002787 4.0e-115 419.5 224 86.6
CiPaw.14G136900 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.1e-99 368.2 189 86.8
CAN.G1783.5 Capsicum annuum HOM05D002496 ORTHO05D002787 6.6e-86 322.4 174 85.1
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 6.9e-83 312.4 372 49.7
CAN.G2026.4 Capsicum annuum HOM05D002496 ORTHO05D002787 8.4e-73 278.9 184 73.4
FvH4_3g45710 Fragaria vesca HOM05D002496 ORTHO05D002787 4.9e-65 253.1 370 40.3
Manes.15G109101 Manihot esculenta HOM05D002496 ORTHO05D000252 4.3e-53 213.4 121 85.1
CBR_g39746 Chara braunii HOM05D002496 ORTHO05D002787 6.3e-52 209.5 494 32.4
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.5e-50 204.9 147 70.7
FAN04G0904 Fragaria x ananassa HOM05D002496 ORTHO05D002787 5.9e-50 203.0 102 90.2
CBR_g37133 Chara braunii HOM05D002496 ORTHO05D002787 7.7e-50 202.6 259 40.9
FAN04G0011 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.2e-47 195.3 127 71.7
Cre02.g112250 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 7.9e-47 192.6 331 34.7
Cre10.g448850 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 4.1e-43 180.3 553 28.6
Cre02.g112300 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 2.0e-42 177.9 356 34.8
MCO05G112 Micromonas commoda HOM05D002496 ORTHO05D002787 3.8e-41 173.7 352 33.8
CBR_g23253 Chara braunii HOM05D002496 ORTHO05D002787 5.5e-40 169.9 264 40.5
HPP92_024697 Vanilla planifolia HOM05D002496 ORTHO05D002787 1.4e-38 165.2 279 37.3
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 2.2e-36 157.9 107 69.2
MCO07G349 Micromonas commoda HOM05D002496 ORTHO05D002787 1.2e-34 152.1 311 32.5
FAN21G2381 Fragaria x ananassa HOM05D002496 ORTHO05D002787 8.8e-30 136.0 100 66.0
CBR_g38074 Chara braunii HOM05D007859 ORTHO05D002787 1.7e-28 131.7 178 41.6
CBR_g38075 Chara braunii HOM05D000019 ORTHO05D002787 3.1e-27 127.5 219 37.4
Cre17.g728300 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 3.1e-27 127.5 358 29.3
FAN11G3266 Fragaria x ananassa HOM05D002496 ORTHO05D002787 4.1e-27 127.1 77 77.9
PRCOL_00006516 Prasinoderma coloniale HOM05D002496 ORTHO05D002787 9.1e-27 125.9 201 35.8
Cre05.g241202 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 5.9e-26 123.2 311 32.2
CAN.G337.40 Capsicum annuum HOM05D002496 ORTHO05D002787 7.7e-26 122.9 108 58.3
MCO11G888 Micromonas commoda HOM05D002496 ORTHO05D002787 6.5e-25 119.8 314 29.3
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 2.0e-18 98.2 135 46.7
MCO09G147 Micromonas commoda HOM05D002496 ORTHO05D002787 2.0e-18 98.2 309 27.5
MCO16G075 Micromonas commoda HOM05D002496 ORTHO05D002787 3.6e-15 87.4 163 36.2
C03p92650 Brassica napus HOM05D002496 ORTHO05D002787 2.7e-10 71.2 33 81.8
Haze_13303 Corylus avellana HOM05D000007 ORTHO05D000039 5.9e-10 70.1 44 81.8


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