Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 4.1e-53 211.1 102 100.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 6.8e-24 114.0 57 91.2
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 6.8e-24 114.0 57 91.2
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 5.7e-23 110.9 57 89.5
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 3.7e-22 108.2 57 87.7
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 8.3e-22 107.1 57 86.0
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 8.3e-22 107.1 57 86.0
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.3e-22 107.1 57 86.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.8e-21 105.9 57 86.0
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 2.4e-21 105.5 59 79.7
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.4e-21 105.5 57 86.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.4e-21 105.5 57 84.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.1e-21 105.1 57 84.2
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 4.1e-21 104.8 57 84.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 5.4e-21 104.4 57 84.2
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 7.0e-21 104.0 76 67.1
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 7.0e-21 104.0 57 84.2
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 9.2e-21 103.6 57 82.5
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 9.2e-21 103.6 57 84.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.2e-20 103.2 57 82.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.6e-20 102.8 57 82.5
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.6e-20 102.8 57 82.5
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.6e-20 102.8 57 82.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.6e-20 102.8 57 82.5
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.0e-20 102.4 57 82.5
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.7e-20 102.1 57 80.7
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.7e-20 102.1 57 80.7
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.5e-20 101.7 57 82.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 3.5e-20 101.7 57 80.7
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 4.5e-20 101.3 56 82.1
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 78.9
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 80.7
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 80.7
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 80.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 80.7
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 5.9e-20 100.9 57 80.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 7.8e-20 100.5 57 80.7
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.0e-19 100.1 57 78.9
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.3e-19 99.8 57 80.7
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.7e-19 99.4 57 80.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.7e-19 99.4 57 80.7
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.3e-19 99.0 57 80.7
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.3e-19 99.0 57 80.7
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-19 99.0 57 80.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.3e-19 99.0 57 78.9
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 2.9e-19 98.6 57 78.9
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.9e-19 98.6 57 78.9
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 2.9e-19 98.6 57 78.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 2.9e-19 98.6 57 78.9
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 3.8e-19 98.2 57 77.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.8e-19 98.2 57 78.9
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.0e-19 97.8 52 84.6
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 5.0e-19 97.8 57 77.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 5.0e-19 97.8 57 78.9
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 5.0e-19 97.8 57 78.9
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 6.6e-19 97.4 57 78.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 6.6e-19 97.4 57 77.2
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 8.6e-19 97.1 57 77.2
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.1e-18 96.7 57 77.2
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.1e-18 96.7 57 75.4
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.1e-18 96.7 57 78.9
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.5e-18 96.3 57 77.2
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.5e-18 96.3 57 77.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.9e-18 95.9 57 75.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.5e-18 95.5 57 77.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 2.5e-18 95.5 57 77.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 3.3e-18 95.1 57 75.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.3e-18 95.1 57 77.2
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 4.3e-18 94.7 57 73.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 5.6e-18 94.4 57 77.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 5.6e-18 94.4 57 75.4
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 9.5e-18 93.6 57 75.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.1e-17 92.4 57 70.2
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.0e-16 90.1 57 75.4
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.3e-16 89.0 58 70.7
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 6.8e-16 87.4 59 69.5
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.9e-14 81.3 58 62.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.8e-08 62.8 34 82.4
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.3e-08 62.4 46 65.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.1e-08 62.0 48 64.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 4.0e-08 61.6 46 65.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.0e-08 61.6 46 65.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.3e-06 56.6 34 76.5


User provided reference genes

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