Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 4.2e-74 281.2 133 100.0
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 1.6e-62 242.7 133 88.0
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 3.8e-59 231.5 133 83.5
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 1.4e-56 223.0 133 83.5
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 2.3e-56 222.2 133 76.7
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.2e-54 215.7 133 77.4
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 3.7e-54 214.9 133 77.4
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 1.1e-53 213.4 133 72.9
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 1.8e-53 212.6 134 75.4
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 1.8e-53 212.6 133 76.7
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 1.5e-52 209.5 130 75.4
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 1.1e-50 203.4 132 75.8
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 6.1e-49 197.6 134 73.9
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 1.0e-48 196.8 133 72.2
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 5.1e-48 194.5 133 69.9
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 1.5e-47 193.0 134 69.4
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 1.5e-47 193.0 133 70.7
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 2.0e-47 192.6 133 68.4
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 2.0e-47 192.6 133 69.9
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 3.3e-47 191.8 132 69.7
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 1.3e-46 189.9 133 71.4
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 1.3e-46 189.9 133 71.4
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 2.2e-46 189.1 133 68.4
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 3.7e-46 188.3 136 69.9
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 3.7e-46 188.3 133 70.7
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 1.4e-45 186.4 134 69.4
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 3.1e-45 185.3 130 71.5
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 1.5e-44 183.0 131 68.7
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 2.0e-44 182.6 133 65.4
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 1.7e-43 179.5 133 65.4
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 1.7e-43 179.5 126 67.5
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 6.5e-43 177.6 131 67.9
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 1.1e-42 176.8 134 67.9
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 7.2e-42 174.1 132 66.7
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 2.7e-41 172.2 131 62.6
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 3.6e-41 171.8 135 66.7
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 1.0e-40 170.2 134 64.2
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 3.9e-40 168.3 136 64.7
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 8.8e-40 167.2 133 65.4
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 9.7e-39 163.7 133 60.2
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 1.3e-38 163.3 135 60.0
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 1.7e-38 162.9 133 60.2
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 1.7e-38 162.9 135 60.0
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 2.2e-38 162.5 133 60.9
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 2.2e-38 162.5 135 60.0
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 2.2e-38 162.5 133 61.7
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 2.8e-38 162.2 133 60.9
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 6.3e-38 161.0 138 61.6
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 3.1e-37 158.7 133 63.9
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 3.1e-37 158.7 135 57.0
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 3.1e-37 158.7 134 59.7
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 9.1e-37 157.1 133 59.4
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.6e-36 156.4 133 58.6
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 2.0e-36 156.0 133 58.6
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 2.6e-36 155.6 133 57.9
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 3.5e-36 155.2 133 57.9
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 3.5e-36 155.2 133 56.4
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 5.9e-36 154.5 133 57.1
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 5.9e-36 154.5 133 57.1
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.0e-35 153.7 133 58.6
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 2.2e-35 152.5 133 57.9
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 1.1e-34 150.2 131 59.5
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 2.5e-34 149.1 130 56.9
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 4.2e-34 148.3 102 67.6
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 5.5e-34 147.9 128 57.0
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.8e-32 142.9 130 58.5
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 1.5e-31 139.8 139 54.7
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 2.6e-31 139.0 142 50.0
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 1.4e-29 133.3 111 61.3
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 1.3e-27 126.7 136 47.8
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 5.4e-21 104.8 86 61.6
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 5.0e-19 98.2 61 65.6
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.6e-17 93.2 47 78.7
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 2.1e-17 92.8 78 53.8
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 2.1e-17 92.8 115 47.0
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 2.8e-17 92.4 133 42.1
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 2.3e-16 89.4 141 34.8
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 4.0e-16 88.6 86 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 1.1e-13 80.5 150 33.3
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 7.8e-12 74.3 47 63.8


User provided reference genes

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