Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 3.3e-136 488.4 257 100.0
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 2.2e-124 449.1 268 88.1
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 3.8e-124 448.4 268 88.1
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 4.2e-123 444.9 268 86.6
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 2.7e-122 442.2 265 87.2
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 2.7e-122 442.2 268 86.2
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 2.3e-121 439.1 268 86.6
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 4.5e-117 424.9 258 86.0
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 5.5e-115 417.9 265 82.3
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 1.8e-113 412.9 265 82.6
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 5.4e-110 401.4 248 82.3
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.0e-109 399.4 248 81.5
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 4.5e-109 398.3 248 81.5
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 7.7e-109 397.5 245 83.7
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.0e-108 397.1 248 81.9
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 2.9e-108 395.6 241 83.8
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 2.9e-108 395.6 246 81.3
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.8e-108 395.2 238 84.0
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.8e-108 395.2 238 84.0
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.1e-107 393.7 248 80.6
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 1.5e-107 393.3 246 81.7
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 1.9e-107 392.9 250 81.2
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 2.5e-107 392.5 244 81.6
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 4.2e-107 391.7 246 80.5
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 5.5e-107 391.3 248 79.8
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 7.2e-107 391.0 246 80.9
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 7.2e-107 391.0 248 80.2
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 7.2e-107 391.0 245 81.6
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 9.5e-107 390.6 240 81.7
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 1.2e-106 390.2 246 79.7
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.2e-106 390.2 241 81.7
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 2.7e-106 389.0 248 80.2
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 6.1e-106 387.9 248 79.4
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.0e-105 387.1 240 82.1
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.0e-105 387.1 249 80.7
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.8e-105 386.3 248 79.0
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 1.8e-105 386.3 241 81.3
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.3e-105 386.0 241 80.9
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 2.3e-105 386.0 246 81.7
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 2.3e-105 386.0 246 81.7
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 3.0e-105 385.6 246 80.9
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.2e-104 383.6 246 79.7
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 1.5e-104 383.3 240 81.7
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 2.0e-104 382.9 248 79.4
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 2.0e-104 382.9 246 79.3
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 2.6e-104 382.5 268 73.9
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.6e-104 382.5 247 79.4
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 3.4e-104 382.1 248 79.4
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 5.7e-104 381.3 245 82.0
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 5.7e-104 381.3 246 79.3
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 7.5e-104 380.9 248 79.0
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 7.5e-104 380.9 280 72.9
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 1.7e-103 379.8 248 78.2
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 2.8e-103 379.0 241 81.3
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 3.7e-103 378.6 246 80.1
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 1.1e-102 377.1 273 72.2
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 5.4e-102 374.8 240 79.6
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 7.0e-102 374.4 246 78.9
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 2.0e-101 372.9 244 77.9
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 3.5e-101 372.1 241 79.3
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.5e-101 372.1 241 79.7
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.5e-101 371.7 245 76.7
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-100 369.8 245 76.7
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-100 369.8 245 76.7
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 2.9e-100 369.0 240 77.1
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.0e-100 368.2 245 76.3
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 1.5e-99 366.7 240 77.5
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 7.3e-99 364.4 246 76.4
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.1e-98 362.8 245 77.6
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.8e-98 362.5 249 74.7
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 3.6e-98 362.1 246 75.2
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 3.6e-98 362.1 241 76.8
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 4.7e-98 361.7 244 77.0
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.0e-98 360.9 245 75.9
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 8.0e-98 360.9 241 76.3
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.4e-97 360.1 246 75.6
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.4e-97 360.1 246 75.6
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.4e-97 360.1 246 75.6
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.4e-97 360.1 246 75.6
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 1.8e-97 359.8 246 75.2
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.8e-97 359.8 246 74.0
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.3e-97 359.4 241 75.5
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 2.3e-97 359.4 330 62.1
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 4.0e-97 358.6 246 75.2
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.5e-96 356.7 246 74.4
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 4.4e-96 355.1 241 74.7
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 7.5e-96 354.4 247 76.5
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 4.9e-95 351.7 248 72.6
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 4.1e-94 348.6 241 74.3
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 4.1e-94 348.6 267 71.2
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-93 347.1 255 71.8
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 5.9e-93 344.7 245 73.5
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.3e-92 343.6 245 72.7
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 8.6e-92 340.9 245 73.1
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 1.9e-91 339.7 245 73.1
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 2.5e-91 339.3 248 71.4
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 8.0e-90 334.3 210 81.0
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 1.5e-88 330.1 247 72.9
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.2e-87 326.2 246 65.4
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-86 323.6 227 74.4
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 3.2e-86 322.4 246 65.9
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 2.5e-83 312.8 247 64.8
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.2e-82 310.5 245 64.9
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 2.9e-79 299.3 250 62.0
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 4.6e-77 292.0 207 70.5
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.5e-75 286.2 252 59.1
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.5e-75 286.2 252 59.1
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.6e-72 276.2 245 63.3
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 6.4e-71 271.6 239 55.2
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 8.4e-71 271.2 238 55.5
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.4e-70 270.4 238 56.3
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 7.1e-70 268.1 249 59.8
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.3e-67 258.1 153 84.3
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.1e-65 254.2 161 78.3
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.0e-65 252.3 168 79.2
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.5e-56 223.8 184 69.0
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.6e-53 212.2 127 80.3
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.1e-50 203.4 126 77.8
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.5e-43 180.6 126 65.9
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.9e-32 142.1 76 84.2
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.3e-31 141.0 76 84.2
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 1.0e-28 131.3 93 68.8
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.0e-28 129.8 111 65.8
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 4.4e-19 99.4 77 57.1
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.8e-18 96.7 62 71.0
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 6.9e-17 92.0 240 30.0
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.5e-16 90.9 102 56.9
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.5e-16 90.9 208 30.8
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 7.7e-16 88.6 112 44.6
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 1.5e-06 57.8 38 68.4


User provided reference genes

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