Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 6.3e-269 930.2 488 100.0
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 5.1e-202 708.0 513 77.8
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 4.6e-179 631.7 398 81.7
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.0e-162 577.4 515 67.0
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 3.3e-161 572.4 563 62.3
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 1.2e-158 563.9 389 76.1
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 8.2e-152 541.2 513 63.7
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 5.3e-151 538.5 516 63.6
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 3.5e-142 509.2 394 69.0
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 2.8e-136 489.6 484 62.6
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 9.8e-113 411.4 484 54.5
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 1.3e-112 411.0 484 54.5
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.9e-109 399.4 490 53.7
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 3.9e-109 399.4 480 54.8
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 4.7e-107 392.5 486 53.7
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 8.9e-106 388.3 489 53.4
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 1.7e-104 384.0 511 49.7
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 3.7e-104 382.9 482 51.2
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.1e-103 381.3 482 51.0
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 7.8e-102 375.2 491 50.3
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 3.3e-100 369.8 491 48.1
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.1e-98 364.8 488 50.0
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.8e-98 364.0 490 49.8
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 3.4e-97 359.8 482 52.9
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 9.9e-97 358.2 400 52.8
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 2.2e-96 357.1 480 50.6
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 3.8e-96 356.3 473 50.1
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 2.7e-94 350.1 386 51.8
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 6.0e-94 349.0 495 49.3
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 7.8e-94 348.6 483 50.5
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.0e-93 348.2 487 49.5
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.0e-93 348.2 483 50.3
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.0e-93 348.2 495 49.5
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.7e-93 347.4 475 49.3
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 3.9e-93 346.3 482 49.6
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 2.5e-92 343.6 488 49.0
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 3.3e-92 343.2 480 50.0
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 4.3e-92 342.8 487 49.1
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 7.3e-92 342.0 490 48.2
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 9.6e-92 341.7 481 48.6
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 8.1e-91 338.6 482 47.9
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 9.9e-89 331.6 475 48.0
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 9.9e-89 331.6 476 48.9
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 2.2e-88 330.5 457 47.3
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 4.9e-88 329.3 507 45.0
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 4.9e-88 329.3 487 47.6
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 3.2e-87 326.6 483 46.8
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 4.2e-87 326.2 508 39.0
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 2.1e-86 323.9 531 42.7
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 1.7e-85 320.9 415 47.5
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 4.8e-83 312.8 388 47.2
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.4e-82 311.2 487 43.5
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 1.5e-81 307.8 370 49.5
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 2.0e-81 307.4 560 42.7
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 4.5e-81 306.2 497 40.8
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 3.8e-80 303.1 367 48.2
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 3.2e-79 300.1 496 45.6
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 4.2e-79 299.7 483 44.1
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.2e-78 298.1 489 44.6
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 4.6e-78 296.2 490 43.7
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 3.0e-77 293.5 397 44.1
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 4.8e-75 286.2 490 42.0
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 1.4e-74 284.6 551 39.4
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.8e-74 284.3 501 43.5
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 1.2e-73 281.6 549 40.6
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 1.5e-73 281.2 494 42.7
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 2.6e-73 280.4 550 39.1
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 5.8e-73 279.3 339 46.9
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 7.6e-73 278.9 477 41.7
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 7.6e-73 278.9 477 41.7
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 3.8e-72 276.6 487 43.9
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 4.9e-72 276.2 432 41.7
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.2e-70 271.6 386 43.3
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.2e-70 271.6 264 55.7
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 3.5e-70 270.0 451 41.2
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 4.6e-70 269.6 519 41.6
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 8.7e-69 265.4 382 42.9
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 2.8e-67 260.4 450 43.8
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 6.2e-67 259.2 531 40.1
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.0e-64 251.9 273 50.5
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.4e-64 248.8 476 41.8
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 3.2e-63 246.9 474 41.8
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 7.1e-63 245.7 486 41.2
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 3.0e-61 240.4 493 36.1
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 8.7e-61 238.8 484 41.1
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 2.8e-59 233.8 209 63.6
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 4.1e-58 229.9 281 47.7
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 9.0e-58 228.8 391 45.3
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.3e-51 208.4 314 47.8
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.0e-49 201.1 479 37.6
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 3.2e-47 193.7 272 43.8
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 1.4e-45 188.3 292 50.3
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.7e-43 180.3 314 40.4
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.2e-41 175.3 270 43.0
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 1.3e-40 171.8 353 36.0
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 2.9e-40 170.6 179 52.0
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 6.5e-40 169.5 302 36.4
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 8.8e-37 159.1 277 35.4
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 9.1e-34 149.1 328 39.0
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 6.5e-32 142.9 290 35.5
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 2.5e-31 141.0 114 64.0
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 6.7e-29 132.9 147 53.1
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 2.0e-25 121.3 398 27.6
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 4.7e-22 110.2 96 60.4
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 7.0e-18 96.3 97 53.6
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 5.2e-13 80.1 134 36.6
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 6.3e-11 73.2 58 60.3
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 8.3e-11 72.8 72 55.6
arahy.Tifrunner.gnm1.ann1.HJ5DAC Arachis hypogaea HOM05D007081 ORTHO05D008834 1.7e-08 65.1 50 64.0
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.5e-07 61.2 201 38.8
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 1.2e-06 58.9 132 34.8
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 1.6e-06 58.5 125 32.0
SMO367G0074 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 2.1e-06 58.2 100 40.0
FAN01G0265 Fragaria x ananassa HOM05D005384 ORTHO05D006477 2.8e-06 57.8 126 34.1
HanXRQChr17g0535751 Helianthus annuus HOM05D005384 ORTHO05D006477 2.8e-06 57.8 134 32.8
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 4.7e-06 57.0 110 30.9
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 6.1e-06 56.6 112 39.3
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 8.0e-06 56.2 158 31.0
Prupe.2G049800 Prunus persica HOM05D005384 ORTHO05D006477 8.0e-06 56.2 139 35.3


User provided reference genes

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