Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16057_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 4.2e-195 684.5 344 100.0
Psat5g052160 Pisum sativum HOM05D000159 ORTHO05D000148 1.9e-102 376.7 406 59.9
Medtr3g099080 Medicago truncatula HOM05D000159 ORTHO05D000148 2.5e-102 376.3 398 60.6
TPR.G14227 Trifolium pratense HOM05D000159 ORTHO05D000148 1.3e-90 337.4 410 55.9
Lalb_Chr07g0183521 Lupinus albus HOM05D000159 ORTHO05D000148 2.4e-81 306.6 414 49.5
Lalb_Chr12g0202271 Lupinus albus HOM05D000159 ORTHO05D000148 1.8e-76 290.4 409 49.9
Lj1g0006165 Lotus japonicus HOM05D000159 ORTHO05D000148 1.5e-75 287.3 404 50.7
Phvul.009G165100 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 3.1e-73 279.6 384 50.3
VMungo1309G1329 Vigna mungo HOM05D000159 ORTHO05D000148 1.2e-72 277.7 400 47.2
Lj4g0016647 Lotus japonicus HOM05D000159 ORTHO05D000148 1.3e-71 274.2 404 48.0
Glyma.05G204100 Glycine max HOM05D000159 ORTHO05D000148 8.9e-68 261.5 409 46.9
Glyma.08G011500 Glycine max HOM05D000159 ORTHO05D000148 2.9e-66 256.5 414 46.4
Lalb_Chr13g0297221 Lupinus albus HOM05D000159 ORTHO05D000148 3.2e-65 253.1 403 47.1
Phvul.002G286000 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 6.2e-61 238.8 405 44.2
VMungo0251G3255 Vigna mungo HOM05D000159 ORTHO05D000148 6.2e-61 238.8 402 44.0
arahy.Tifrunner.gnm1.ann1.YYFQ06 Arachis hypogaea HOM05D000159 ORTHO05D000148 1.4e-60 237.7 427 43.1
arahy.Tifrunner.gnm1.ann1.TYJ1PE Arachis hypogaea HOM05D000159 ORTHO05D000148 2.3e-60 236.9 434 42.9
Glyma.04G197100 Glycine max HOM05D000159 ORTHO05D000148 4.0e-60 236.1 420 44.8
Medtr8g096780 Medicago truncatula HOM05D000159 ORTHO05D000148 4.4e-59 232.6 413 43.6
Glyma.06G168600 Glycine max HOM05D000159 ORTHO05D000148 3.5e-56 223.0 435 43.7
Haze_07163 Corylus avellana HOM05D000159 ORTHO05D000148 3.9e-55 219.5 422 39.8
Cfa018775 Carpinus fangiana HOM05D000159 ORTHO05D000148 7.3e-54 215.3 404 40.3
Prupe.5G149000 Prunus persica HOM05D000159 ORTHO05D000148 1.4e-52 211.1 419 41.1
TPR.G12937 Trifolium pratense HOM05D000159 ORTHO05D000148 1.4e-52 211.1 415 40.5
CiPaw.11G005400 Carya illinoinensis HOM05D000159 ORTHO05D000148 3.1e-52 209.9 409 40.3
QL10p002494 Quercus lobata HOM05D000159 ORTHO05D000148 1.2e-51 208.0 406 39.9
GSVIVG01008556001 Vitis vinifera HOM05D000159 ORTHO05D000148 4.6e-48 196.1 398 38.4
Thecc.03G131700 Theobroma cacao HOM05D000159 ORTHO05D000148 2.3e-47 193.7 402 38.8
CiPaw.12G044600 Carya illinoinensis HOM05D000159 ORTHO05D000148 3.0e-47 193.4 406 39.2
Atru.chr6.1824 Acer truncatum HOM05D000159 ORTHO05D000148 9.5e-46 188.3 404 38.6
Potri.015G098900 Populus trichocarpa HOM05D000159 ORTHO05D000148 8.1e-45 185.3 399 37.1
COL.COLO4_07117 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.1e-44 184.9 403 37.2
MD06G1138800 Malus domestica HOM05D000159 ORTHO05D000148 1.4e-44 184.5 426 36.6
Duzib084G0808 Durio zibethinus HOM05D000159 ORTHO05D000148 5.2e-44 182.6 400 37.8
Dinv11189 Davidia involucrata HOM05D000159 ORTHO05D000148 1.3e-42 177.9 402 35.6
RcHm_v2.0_Chr7g0189811 Rosa chinensis HOM05D000159 ORTHO05D000148 8.4e-42 175.3 421 37.1
Sabra15G0119800 Salix brachista HOM05D000159 ORTHO05D000148 2.4e-41 173.7 401 36.7
FAN13G2472 Fragaria x ananassa HOM05D000159 ORTHO05D000148 5.4e-41 172.6 422 35.8
Dinv23166 Davidia involucrata HOM05D000159 ORTHO05D000148 7.1e-41 172.2 415 35.7
Ciclev10031834m.g Citrus clementina HOM05D000159 ORTHO05D000148 2.7e-40 170.2 402 34.6
FAN08G2470 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.3e-39 167.9 422 35.3
FAN04G1359 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.7e-39 167.5 422 35.1
Duzib205G0076 Durio zibethinus HOM05D000159 ORTHO05D000148 3.9e-39 166.4 402 35.8
FAN18G0259 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.6e-37 161.0 456 32.9
Actinidia18340 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.2e-37 159.1 399 35.8
TWI39G0282 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.4e-36 157.9 400 34.5
TWI14G0250 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 6.8e-36 155.6 402 35.1
TAR629G1910 Trochodendron aralioides HOM05D000159 ORTHO05D000148 4.4e-35 152.9 413 34.9
Gohir.A11G037100 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.7e-34 151.0 397 34.0
Eucgr.K02708 Eucalyptus grandis HOM05D000159 ORTHO05D000148 1.9e-33 147.5 399 34.6
Hma1.2p1_0014F.1_g009250 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 3.2e-33 146.7 404 34.4
Gorai.007G043500 Gossypium raimondii HOM05D000159 ORTHO05D000148 5.1e-31 139.4 397 32.7
CsaV3_1G000450 Cucumis sativus L. HOM05D000159 ORTHO05D000148 3.3e-30 136.7 399 32.8
MELO3C026196.2 Cucumis melo HOM05D000159 ORTHO05D000148 4.3e-30 136.3 401 33.2
Gohir.D11G040400 Gossypium hirsutum HOM05D000159 ORTHO05D000148 4.3e-30 136.3 397 32.5
ClCG06G018020 Citrullus lanatus HOM05D000159 ORTHO05D000148 9.6e-30 135.2 401 33.4
Lj9A480T84 Lonicera japonica HOM05D000159 ORTHO05D000148 3.6e-29 133.3 396 32.8
Potri.012G100700 Populus trichocarpa HOM05D000159 ORTHO05D000148 3.6e-29 133.3 317 35.6
TAR371G1094 Trochodendron aralioides HOM05D000159 ORTHO05D000148 1.1e-28 131.7 414 31.4
Manes.14G049601 Manihot esculenta HOM05D000159 ORTHO05D000148 3.1e-28 130.2 414 32.9
Psat7g036360 Pisum sativum HOM05D000159 ORTHO05D000148 5.3e-28 129.4 417 32.1
Aqoxy5G03310 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 1.3e-26 124.8 416 32.2
Sed0021220 Sechium edule HOM05D000159 ORTHO05D000148 4.9e-26 122.9 392 33.7
DCAR_007501 Daucus carota HOM05D000159 ORTHO05D000148 8.4e-26 122.1 393 31.6
vmacro19125 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 2.4e-25 120.6 401 30.7
Sabra12G0074000 Salix brachista HOM05D000159 ORTHO05D000148 2.1e-24 117.5 306 33.3
Cpa.g.sc1141.2 Carica papaya HOM05D000159 ORTHO05D000148 3.0e-23 113.6 118 55.1
CANSAT80G0937 Cannabis sativa HOM05D000159 ORTHO05D000148 1.9e-22 110.9 440 31.1
ECA246G2487 Erigeron canadensis HOM05D000159 ORTHO05D000148 1.9e-22 110.9 410 29.8
Ca_17570_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 3.3e-22 110.2 124 52.4
PGR044G1190 Punica granatum HOM05D000159 ORTHO05D000148 3.3e-22 110.2 415 31.1
GSVIVG01010522001 Vitis vinifera HOM05D000159 ORTHO05D000148 3.3e-22 110.2 409 30.1
Lsat_1_v5_gn_5_12360 Lactuca sativa HOM05D000159 ORTHO05D000148 2.1e-21 107.5 424 28.3
Rhsim08G0191600 Rhododendron simsii HOM05D000159 ORTHO05D000148 2.1e-21 107.5 402 28.4
CANSAT80G1186 Cannabis sativa HOM05D000159 ORTHO05D000148 1.1e-20 105.1 425 31.3
QL03p051920 Quercus lobata HOM05D000159 ORTHO05D000148 2.0e-19 100.9 320 32.2
Actinidia25562 Actinidia chinensis HOM05D000159 ORTHO05D000148 4.5e-19 99.8 118 49.2
FvH4_5g08580 Fragaria vesca HOM05D000159 ORTHO05D000148 2.2e-18 97.4 250 36.8
Nn3g16414 Nelumbo nucifera HOM05D000159 ORTHO05D000148 3.8e-18 96.7 118 47.5
Nn4g22275 Nelumbo nucifera HOM05D003325 ORTHO05D003852 8.4e-18 95.5 118 45.8
MD14G1154900 Malus domestica HOM05D000159 ORTHO05D000148 1.1e-17 95.1 122 46.7
Potri.001G058600 Populus trichocarpa HOM05D000159 ORTHO05D000148 6.0e-16 89.4 407 30.5
CSS0006785 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.8e-15 87.8 341 29.9
Lj5A94T48 Lonicera japonica HOM05D000159 ORTHO05D000148 3.9e-15 86.7 119 44.5
MBI07_g11280_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 3.9e-15 86.7 350 29.7
HanXRQChr05g0155911 Helianthus annuus HOM05D000159 ORTHO05D000148 6.7e-15 85.9 416 26.9
Actinidia16923 Actinidia chinensis HOM05D000159 ORTHO05D000148 3.3e-14 83.6 404 27.0
Haze_12443 Corylus avellana HOM05D000159 ORTHO05D000148 4.3e-14 83.2 309 29.4
Sabra01G0042100 Salix brachista HOM05D000159 ORTHO05D000148 4.3e-14 83.2 400 29.2
Carub.0008s1066 Capsella rubella HOM05D000159 ORTHO05D000148 2.1e-13 80.9 411 26.8
GSVIVG01033064001 Vitis vinifera HOM05D000159 ORTHO05D000148 2.1e-13 80.9 397 28.0
Sp6g12750 Schrenkiella parvula HOM05D000159 ORTHO05D000148 4.8e-13 79.7 414 27.5
CiPaw.05G107500 Carya illinoinensis HOM05D000159 ORTHO05D000148 8.1e-13 79.0 325 29.5
Duzib251G0487 Durio zibethinus HOM05D000159 ORTHO05D000148 8.1e-13 79.0 315 30.5
Thhalv10013892m.g Eutrema salsugineum HOM05D000159 ORTHO05D000148 8.1e-13 79.0 412 27.2
HanXRQChr08g0236861 Helianthus annuus HOM05D000159 ORTHO05D000148 8.1e-13 79.0 416 27.4
Manes.13G009400 Manihot esculenta HOM05D000159 ORTHO05D000148 8.1e-13 79.0 402 29.1
Potri.003G169400 Populus trichocarpa HOM05D000159 ORTHO05D000148 8.1e-13 79.0 318 31.4
Duzib248G0350 Durio zibethinus HOM05D000159 ORTHO05D000148 1.8e-12 77.8 320 30.6
Dinv17582 Davidia involucrata HOM05D000159 ORTHO05D000148 2.4e-12 77.4 326 30.7
BcaB01g02890 Brassica carinata HOM05D000159 ORTHO05D000148 3.1e-12 77.0 412 27.9
PSO017G7386 Papaver somniferum HOM05D000159 ORTHO05D000148 3.1e-12 77.0 322 28.9
AT5G50570 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 4.0e-12 76.6 408 27.0
AT5G50670 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 4.0e-12 76.6 408 27.0
THA.LOC104825022 Tarenaya hassleriana HOM05D000159 ORTHO05D000148 4.0e-12 76.6 417 28.5
Aa31LG3G7030 Aethionema arabicum HOM05D000159 ORTHO05D000148 5.3e-12 76.3 406 27.6
TWI36G0448 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 6.9e-12 75.9 328 30.2
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 9.0e-12 75.5 320 30.0
ClCG03G003880 Citrullus lanatus HOM05D000159 ORTHO05D000148 1.2e-11 75.1 323 29.4
BcaC04g20750 Brassica carinata HOM05D000159 ORTHO05D000148 1.5e-11 74.7 411 28.2
C09p39600 Brassica napus HOM05D000159 ORTHO05D000148 1.5e-11 74.7 411 28.2
BolC9t56837H Brassica oleracea HOM05D000159 ORTHO05D000148 1.5e-11 74.7 411 28.2
AL8G24830 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 2.0e-11 74.3 408 27.2
CARHR257710 Cardamine hirsuta HOM05D000159 ORTHO05D000148 2.0e-11 74.3 404 27.0
Gohir.D02G147000 Gossypium hirsutum HOM05D000159 ORTHO05D000148 5.8e-11 72.8 317 28.4
Duzib268G0115 Durio zibethinus HOM05D000159 ORTHO05D000148 7.6e-11 72.4 319 28.5
Thecc.02G203100 Theobroma cacao HOM05D000159 ORTHO05D000148 1.0e-10 72.0 327 30.6
QL02p071002 Quercus lobata HOM05D000159 ORTHO05D000148 1.3e-10 71.6 408 29.2
TWI75G0703 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.3e-10 71.6 323 30.7
Actinidia09630 Actinidia chinensis HOM05D000159 ORTHO05D000148 1.7e-10 71.2 328 28.4
CiPaw.06G104700 Carya illinoinensis HOM05D000159 ORTHO05D000148 2.2e-10 70.9 329 26.4
Gorai.005G164600 Gossypium raimondii HOM05D000159 ORTHO05D000148 2.2e-10 70.9 317 28.7
PSO478G3656 Papaver somniferum HOM05D000159 ORTHO05D000148 2.2e-10 70.9 378 27.0
PSO478G4024 Papaver somniferum HOM05D000159 ORTHO05D000148 2.2e-10 70.9 378 27.0
CDE05G2825 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 2.9e-10 70.5 392 26.8
CsaV3_1G009760 Cucumis sativus L. HOM05D000159 ORTHO05D000148 2.9e-10 70.5 332 28.3
Hund25477 Selenicereus undatus HOM05D000159 ORTHO05D000148 4.9e-10 69.7 118 39.8
Gorai.001G057700 Gossypium raimondii HOM05D000159 ORTHO05D000148 6.5e-10 69.3 361 26.0
HPP92_023375 Vanilla planifolia HOM05D000159 ORTHO05D000148 6.5e-10 69.3 121 38.8
BcaC01g04803 Brassica carinata HOM05D000159 ORTHO05D000148 8.4e-10 68.9 404 27.5
C03p33610 Brassica napus HOM05D000159 ORTHO05D000148 8.4e-10 68.9 404 27.5
Rhsim08G0041800 Rhododendron simsii HOM05D000159 ORTHO05D000148 8.4e-10 68.9 118 40.7
BolC3t15680H Brassica oleracea HOM05D000159 ORTHO05D000148 1.9e-09 67.8 406 27.1
Manes.12G009000 Manihot esculenta HOM05D000159 ORTHO05D000148 1.9e-09 67.8 409 28.4
Gohir.D07G054500 Gossypium hirsutum HOM05D000159 ORTHO05D000148 3.2e-09 67.0 358 26.0
Sed0023398 Sechium edule HOM05D000159 ORTHO05D000148 4.2e-09 66.6 348 29.0
Sc16g0004320 Simmondsia chinensis HOM05D000159 ORTHO05D000148 4.2e-09 66.6 423 24.1
Gohir.A07G050150 Gossypium hirsutum HOM05D000159 ORTHO05D000148 7.1e-09 65.9 369 25.7
AUR62028905 Chenopodium quinoa HOM05D000159 ORTHO05D000148 1.2e-08 65.1 118 39.0
Sc14g0009140 Simmondsia chinensis HOM05D000159 ORTHO05D000148 1.2e-08 65.1 118 41.5
CSS0029472 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.6e-08 64.7 121 37.2
AUR62005645 Chenopodium quinoa HOM05D000159 ORTHO05D000148 2.1e-08 64.3 118 38.1
C03p19610 Brassica napus HOM05D000159 ORTHO05D000148 2.7e-08 63.9 403 26.3
COL.COLO4_20441 Corchorus olitorius HOM05D000159 ORTHO05D000148 2.7e-08 63.9 316 28.2
Gohir.A03G124700 Gossypium hirsutum HOM05D000159 ORTHO05D000148 2.7e-08 63.9 317 27.4
PGR102G2020 Punica granatum HOM05D000159 ORTHO05D000148 2.7e-08 63.9 373 26.3
A03p16660 Brassica napus HOM05D000159 ORTHO05D000148 3.5e-08 63.5 403 26.3
BolC3t14341H Brassica oleracea HOM05D000159 ORTHO05D000148 4.6e-08 63.2 408 26.0
BcaC01g06043 Brassica carinata HOM05D000159 ORTHO05D000148 7.9e-08 62.4 404 26.7
BraA03t10952Z Brassica rapa HOM05D000159 ORTHO05D000148 7.9e-08 62.4 404 26.7
BcaB01g04145 Brassica carinata HOM05D000159 ORTHO05D000148 1.0e-07 62.0 396 28.5
Ciclev10032171m.g Citrus clementina HOM05D000159 ORTHO05D000148 1.0e-07 62.0 318 29.9
vmacro18356 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 1.0e-07 62.0 118 38.1
Lj1g0019931 Lotus japonicus HOM05D000159 ORTHO05D000148 1.3e-07 61.6 118 37.3
vmacro16098 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 1.3e-07 61.6 323 27.9
CDE05G3155 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 1.8e-07 61.2 363 24.8
CiPaw.03G057600 Carya illinoinensis HOM05D000159 ORTHO05D000148 2.3e-07 60.8 413 26.4
Haze_14892 Corylus avellana HOM05D000159 ORTHO05D000148 2.3e-07 60.8 118 38.1
Glyma.16G054500 Glycine max HOM05D000159 ORTHO05D000148 3.0e-07 60.5 118 38.1
Hma1.2p1_0275F.1_g110570 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 3.0e-07 60.5 317 28.1
Actinidia30868 Actinidia chinensis HOM05D000159 ORTHO05D000148 5.1e-07 59.7 121 34.7
EL10Ac6g13531 Beta vulgaris HOM05D000159 ORTHO05D000148 6.7e-07 59.3 412 24.8
FAN05G0771 Fragaria x ananassa HOM05D000159 ORTHO05D000148 6.7e-07 59.3 395 26.6
Cfa007212 Carpinus fangiana HOM05D000159 ORTHO05D000148 8.7e-07 58.9 118 37.3
Glyma.19G094000 Glycine max HOM05D000159 ORTHO05D000148 8.7e-07 58.9 118 39.8
Medtr7g028740 Medicago truncatula HOM05D000159 ORTHO05D000148 8.7e-07 58.9 404 22.8
FAN02G0454 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.1e-06 58.5 393 26.7
FvH4_6g53760 Fragaria vesca HOM05D000159 ORTHO05D000148 1.5e-06 58.2 395 26.6
MELO3C002370.2 Cucumis melo HOM05D000159 ORTHO05D000148 1.9e-06 57.8 341 26.7
Phvul.001G091400 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 1.9e-06 57.8 118 39.0
Peaxi162Scf00128g01418 Petunia axillaris HOM05D000159 ORTHO05D000148 2.5e-06 57.4 260 27.7
Hund06103 Selenicereus undatus HOM05D000159 ORTHO05D000148 2.5e-06 57.4 37 67.6
VMungo1383G1941 Vigna mungo HOM05D000159 ORTHO05D000148 2.5e-06 57.4 118 39.8
Medtr8g066240 Medicago truncatula HOM05D000159 ORTHO05D000148 3.3e-06 57.0 78 50.0
Dinv11685 Davidia involucrata HOM05D000159 ORTHO05D000148 7.4e-06 55.8 36 69.4
FAN14G1879 Fragaria x ananassa HOM05D000159 ORTHO05D000148 7.4e-06 55.8 396 26.8
Sc11g0000370 Simmondsia chinensis HOM05D000159 ORTHO05D000148 7.4e-06 55.8 343 25.7
EL10Ac6g15434 Beta vulgaris HOM05D000159 ORTHO05D000148 9.6e-06 55.5 130 34.6


User provided reference genes

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