Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 4.8e-27 123.6 57 100.0
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 3.5e-22 107.5 53 90.6
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 2.3e-21 104.8 53 86.8
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 1.1e-20 102.4 51 88.2
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 3.7e-19 97.4 53 79.2
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 1.2e-17 92.4 51 76.5
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 1.7e-16 88.6 53 66.0
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 2.2e-16 88.2 55 70.9
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 5.0e-16 87.0 53 67.9
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 8.5e-16 86.3 55 69.1
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 1.4e-15 85.5 53 66.0
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 2.5e-15 84.7 53 62.3
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 2.5e-15 84.7 53 66.0
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 5.5e-15 83.6 46 80.4
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 9.3e-15 82.8 51 68.6
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 9.3e-15 82.8 53 62.3
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 1.2e-14 82.4 53 60.4
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 1.2e-14 82.4 53 64.2
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 1.6e-14 82.0 53 62.3
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 2.1e-14 81.6 53 67.9
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 6.1e-14 80.1 53 60.4
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 6.1e-14 80.1 46 73.9
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 6.1e-14 80.1 53 60.4
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 6.1e-14 80.1 53 60.4
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 7.9e-14 79.7 46 71.7
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 7.9e-14 79.7 53 58.5
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 7.9e-14 79.7 53 56.6
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 1.0e-13 79.3 53 60.4
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 1.4e-13 79.0 53 58.5
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 2.3e-13 78.2 52 57.7
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.3e-13 78.2 53 60.4
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.3e-13 78.2 53 60.4
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 3.0e-13 77.8 51 62.7
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 3.9e-13 77.4 53 60.4
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 3.9e-13 77.4 53 56.6
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 3.9e-13 77.4 53 58.5
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 3.9e-13 77.4 53 58.5
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 5.1e-13 77.0 53 62.3
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 6.7e-13 76.6 52 55.8
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 1.5e-12 75.5 53 58.5
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.9e-12 75.1 53 54.7
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.9e-12 75.1 53 54.7
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 2.5e-12 74.7 53 58.5
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 3.3e-12 74.3 53 54.7
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 4.3e-12 73.9 53 54.7
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 4.3e-12 73.9 53 54.7
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 5.7e-12 73.6 53 56.6
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 5.7e-12 73.6 53 52.8
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 5.7e-12 73.6 53 52.8
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 7.4e-12 73.2 53 58.5
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 7.4e-12 73.2 53 56.6
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 7.4e-12 73.2 53 56.6
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 7.4e-12 73.2 53 54.7
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 7.4e-12 73.2 53 54.7
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 9.7e-12 72.8 53 56.6
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 9.7e-12 72.8 53 56.6
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 1.3e-11 72.4 53 52.8
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 56.6
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 56.6
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 56.6
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 56.6
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 52.8
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 1.7e-11 72.0 53 49.1
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.7e-11 72.0 46 65.2
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 2.2e-11 71.6 53 56.6
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 2.2e-11 71.6 53 56.6
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 2.2e-11 71.6 53 54.7
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 2.2e-11 71.6 53 58.5
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.8e-11 71.2 53 52.8
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.8e-11 71.2 53 52.8
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.8e-11 71.2 53 50.9
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 2.8e-11 71.2 53 50.9
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.8e-11 71.2 53 58.5
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 3.7e-11 70.9 53 54.7
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 3.7e-11 70.9 53 50.9
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 4.8e-11 70.5 53 54.7
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 4.8e-11 70.5 53 54.7
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 4.8e-11 70.5 53 54.7
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 4.8e-11 70.5 53 56.6
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 6.3e-11 70.1 53 56.6
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 6.3e-11 70.1 53 50.9
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 6.3e-11 70.1 53 54.7
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 6.3e-11 70.1 45 64.4
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 1.1e-10 69.3 53 52.8
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 1.4e-10 68.9 53 52.8
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 1.4e-10 68.9 49 55.1
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.8e-10 68.6 53 49.1
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.8e-10 68.6 53 49.1
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 1.8e-10 68.6 53 49.1
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.8e-10 68.6 45 62.2
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 2.4e-10 68.2 51 52.9
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 3.1e-10 67.8 51 51.0
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 5.3e-10 67.0 53 52.8
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 9.1e-10 66.2 40 62.5
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 1.5e-09 65.5 53 49.1
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 2.0e-09 65.1 53 49.1
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 3.4e-09 64.3 53 50.9
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 5.9e-09 63.5 53 50.9
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 5.9e-09 63.5 46 54.3
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 2.2e-08 61.6 46 54.3
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 3.8e-08 60.8 40 60.0
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 8.5e-08 59.7 48 52.1
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 8.5e-08 59.7 55 47.3
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 8.5e-08 59.7 51 49.0
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 1.4e-07 58.9 46 50.0
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 1.9e-07 58.5 55 47.3
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 5.5e-07 57.0 47 46.8
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 2.7e-06 54.7 46 50.0
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 3.6e-06 54.3 46 45.7


User provided reference genes

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